RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 GAGE12HA6NDE8 117 aa12.05□□□□□ -0.48
RAB39A-201ENST00000320578 MALP21145 153 aa12.05□□□□□ -0.48
RAB39A-201ENST00000320578 KIAA0087Q14695 138 aa12.04□□□□□ -0.48
RAB39A-201ENST00000320578 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
RAB39A-201ENST00000320578 FABP2P12104 132 aa12.04□□□□□ -0.48
RAB39A-201ENST00000320578 CCL18P55774 89 aa12.04□□□□□ -0.48
RAB39A-201ENST00000320578 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
RAB39A-201ENST00000320578 PRO1854Q9UHT4 67 aa12.04□□□□□ -0.48
RAB39A-201ENST00000320578 UPK3BQ9BT76 320 aa12.03□□□□□ -0.48
RAB39A-201ENST00000320578 LINC00588Q9Y4M8 146 aa12.02□□□□□ -0.48
RAB39A-201ENST00000320578 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.49
RAB39A-201ENST00000320578 PGPEP1Q9NXJ5 209 aa12.02□□□□□ -0.49
RAB39A-201ENST00000320578 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
RAB39A-201ENST00000320578 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
RAB39A-201ENST00000320578 KRTAP26-1Q6PEX3 210 aa12□□□□□ -0.49
RAB39A-201ENST00000320578 GAGE10A6NGK3 116 aa12□□□□□ -0.49
RAB39A-201ENST00000320578 K7EP34 96 aa12□□□□□ -0.49
RAB39A-201ENST00000320578 CKS1BP61024 79 aa12□□□□□ -0.49
RAB39A-201ENST00000320578 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
RAB39A-201ENST00000320578 TSPAN13O95857 204 aa11.99□□□□□ -0.49
RAB39A-201ENST00000320578 DAND5Q8N907 189 aa11.99□□□□□ -0.49
RAB39A-201ENST00000320578 NAA38Q9BRA0 125 aaKnown RBP11.99□□□□□ -0.49
RAB39A-201ENST00000320578 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
RAB39A-201ENST00000320578 COX17Q14061 63 aa11.98□□□□□ -0.49
RAB39A-201ENST00000320578 SPCS1Q9Y6A9 102 aa11.97□□□□□ -0.49
RAB39A-201ENST00000320578 SOSTDC1Q6X4U4 206 aa11.97□□□□□ -0.49
RAB39A-201ENST00000320578 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
RAB39A-201ENST00000320578 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
RAB39A-201ENST00000320578 A0A0U1RRA0 63 aa11.96□□□□□ -0.49
RAB39A-201ENST00000320578 LINC00158P58513 81 aa11.96□□□□□ -0.49
RAB39A-201ENST00000320578 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.49
RAB39A-201ENST00000320578 SPAG11BQ08648 103 aa11.95□□□□□ -0.5
RAB39A-201ENST00000320578 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
RAB39A-201ENST00000320578 NPC2P61916 151 aa11.95□□□□□ -0.5
RAB39A-201ENST00000320578 LOC107984156A0A0G2JMH3 177 aa11.94□□□□□ -0.5
RAB39A-201ENST00000320578 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
RAB39A-201ENST00000320578 ARL17AQ8IVW1 177 aa11.94□□□□□ -0.5
RAB39A-201ENST00000320578 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
RAB39A-201ENST00000320578 APLNQ9ULZ1 77 aa11.93□□□□□ -0.5
RAB39A-201ENST00000320578 F8WDY8 70 aa11.93□□□□□ -0.5
RAB39A-201ENST00000320578 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
RAB39A-201ENST00000320578 PFN2P35080 140 aa11.91□□□□□ -0.5
RAB39A-201ENST00000320578 NUPR2A6NF83 97 aa11.9□□□□□ -0.5
RAB39A-201ENST00000320578 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
RAB39A-201ENST00000320578 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
RAB39A-201ENST00000320578 RMI2Q96E14 147 aa11.9□□□□□ -0.5
RAB39A-201ENST00000320578 IGKV2D-24A0A075B6R9 120 aa11.89□□□□□ -0.51
RAB39A-201ENST00000320578 C2orf48Q96LS8 159 aa11.89□□□□□ -0.51
RAB39A-201ENST00000320578 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
RAB39A-201ENST00000320578 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
RAB39A-201ENST00000320578 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
RAB39A-201ENST00000320578 ZNF561-AS1K7EIQ3 104 aa11.87□□□□□ -0.51
RAB39A-201ENST00000320578 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
RAB39A-201ENST00000320578 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
RAB39A-201ENST00000320578 DNHD1Q96M86 4753 aa11.87□□□□□ -0.51
RAB39A-201ENST00000320578 COL7A1Q02388 2944 aa11.86□□□□□ -0.51
RAB39A-201ENST00000320578 Q1RN00 199 aa11.86□□□□□ -0.51
RAB39A-201ENST00000320578 C6orf223Q8N319 242 aa11.86□□□□□ -0.51
RAB39A-201ENST00000320578 DYNC2H1Q8NCM8 4307 aaKnown RBP11.86□□□□□ -0.51
RAB39A-201ENST00000320578 RPL13AP40429 203 aaKnown RBP11.86□□□□□ -0.51
RAB39A-201ENST00000320578 C10orf25Q5T742 122 aa11.86□□□□□ -0.51
RAB39A-201ENST00000320578 PSMB2P49721 201 aa11.85□□□□□ -0.51
RAB39A-201ENST00000320578 NDUFC2O95298 119 aa11.84□□□□□ -0.51
RAB39A-201ENST00000320578 SCGB1C2P0DMR2 95 aa11.84□□□□□ -0.51
RAB39A-201ENST00000320578 H7C2G1 150 aa11.83□□□□□ -0.51
RAB39A-201ENST00000320578 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
RAB39A-201ENST00000320578 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
RAB39A-201ENST00000320578 COX6CP09669 75 aa11.83□□□□□ -0.52
RAB39A-201ENST00000320578 Q9HAA7 133 aa11.83□□□□□ -0.52
RAB39A-201ENST00000320578 TRIAP1O43715 76 aa11.82□□□□□ -0.52
RAB39A-201ENST00000320578 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
RAB39A-201ENST00000320578 F8W1H4 67 aa11.81□□□□□ -0.52
RAB39A-201ENST00000320578 C9orf116Q5BN46 136 aaPredicted RBP11.81□□□□□ -0.52
RAB39A-201ENST00000320578 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
RAB39A-201ENST00000320578 CAMK2N2Q96S95 79 aa11.81□□□□□ -0.52
RAB39A-201ENST00000320578 H3BMG7 143 aa11.81□□□□□ -0.52
RAB39A-201ENST00000320578 UBE2DNLQ8IWF7 75 aa11.81□□□□□ -0.52
RAB39A-201ENST00000320578 TCL1BO95988 128 aa11.8□□□□□ -0.52
RAB39A-201ENST00000320578 HIGD2BQ4VC39 106 aa11.8□□□□□ -0.52
RAB39A-201ENST00000320578 LINC00337Q8N6G1 96 aa11.79□□□□□ -0.52
RAB39A-201ENST00000320578 RPL28P46779 137 aaKnown RBP11.77□□□□□ -0.52
RAB39A-201ENST00000320578 RNF151Q2KHN1 245 aa11.77□□□□□ -0.52
RAB39A-201ENST00000320578 PRO0461Q9UI25 63 aa11.77□□□□□ -0.52
RAB39A-201ENST00000320578 ATXN8Q156A1 80 aa11.76□□□□□ -0.53
RAB39A-201ENST00000320578 Q6ZRU5 148 aa11.76□□□□□ -0.53
RAB39A-201ENST00000320578 MEGF8Q7Z7M0 2845 aa11.76□□□□□ -0.53
RAB39A-201ENST00000320578 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
RAB39A-201ENST00000320578 PRKDCP78527 4128 aaKnown RBP11.75□□□□□ -0.53
RAB39A-201ENST00000320578 USP17L23D6RBM5 183 aa11.74□□□□□ -0.53
RAB39A-201ENST00000320578 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
RAB39A-201ENST00000320578 NDUFC2-KCTD14E9PQ53 114 aa11.73□□□□□ -0.53
RAB39A-201ENST00000320578 KRTAP1-5Q9BYS1 174 aa11.73□□□□□ -0.53
RAB39A-201ENST00000320578 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
RAB39A-201ENST00000320578 TRBV10-2A0A0K0K1G8 114 aa11.72□□□□□ -0.53
RAB39A-201ENST00000320578 M0QXV9 152 aa11.72□□□□□ -0.53
RAB39A-201ENST00000320578 LST1O00453 97 aa11.72□□□□□ -0.53
RAB39A-201ENST00000320578 TLX1NBP0CAT3 122 aa11.71□□□□□ -0.54
RAB39A-201ENST00000320578 LINC01600Q96MT4 127 aa11.71□□□□□ -0.54
RAB39A-201ENST00000320578 TMEM126AQ9H061 195 aa11.71□□□□□ -0.54
RAB39A-201ENST00000320578 CASC10Q5T4H9 136 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms