RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
CLIP4-201ENST00000320081 H7C423 109 aa11.84□□□□□ -0.51
CLIP4-201ENST00000320081 ACYP1P07311 99 aa11.84□□□□□ -0.51
CLIP4-201ENST00000320081 SMIM11BQ8TCY0 68 aa11.84□□□□□ -0.51
CLIP4-201ENST00000320081 SMIM1B2RUZ4 78 aa11.83□□□□□ -0.51
CLIP4-201ENST00000320081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.83□□□□□ -0.51
CLIP4-201ENST00000320081 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.51
CLIP4-201ENST00000320081 WFDC9Q8NEX5 89 aa11.83□□□□□ -0.52
CLIP4-201ENST00000320081 NREPQ16612 68 aa11.83□□□□□ -0.52
CLIP4-201ENST00000320081 IGSF10Q6WRI0 2623 aa11.82□□□□□ -0.52
CLIP4-201ENST00000320081 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
CLIP4-201ENST00000320081 HILS1P60008 231 aa11.82□□□□□ -0.52
CLIP4-201ENST00000320081 IBA57-AS1B1ANH7 110 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 LST1O00453 97 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 BRI3O95415 125 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 UNQ6190/PRO20217Q6UXQ8 127 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 Q6ZQY7 126 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 COL27A1Q8IZC6 1860 aaPredicted RBP11.81□□□□□ -0.52
CLIP4-201ENST00000320081 CCDC179H3BU77 68 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 LINC00315P59091 139 aa11.81□□□□□ -0.52
CLIP4-201ENST00000320081 LINC00643Q86TS7 51 aa11.8□□□□□ -0.52
CLIP4-201ENST00000320081 A8MTW9 85 aa11.8□□□□□ -0.52
CLIP4-201ENST00000320081 C20orf197Q8N268 126 aa11.79□□□□□ -0.52
CLIP4-201ENST00000320081 RMI2Q96E14 147 aa11.79□□□□□ -0.52
CLIP4-201ENST00000320081 LAMA5O15230 3695 aa11.79□□□□□ -0.52
CLIP4-201ENST00000320081 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
CLIP4-201ENST00000320081 TMEM256-PLSCR3K7ERE1 68 aa11.79□□□□□ -0.52
CLIP4-201ENST00000320081 FUSP35637 526 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLIP4-201ENST00000320081 CXCL5P42830 114 aa11.79□□□□□ -0.52
CLIP4-201ENST00000320081 KPRPQ5T749 579 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-201ENST00000320081 LYRM9A8MSI8 78 aa11.78□□□□□ -0.52
CLIP4-201ENST00000320081 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
CLIP4-201ENST00000320081 IGHV4-30-4P0DP06 118 aa11.77□□□□□ -0.52
CLIP4-201ENST00000320081 COX7BP24311 80 aa11.77□□□□□ -0.52
CLIP4-201ENST00000320081 C3orf84H3BNL1 204 aa11.77□□□□□ -0.53
CLIP4-201ENST00000320081 NDUFS5O43920 106 aa11.76□□□□□ -0.53
CLIP4-201ENST00000320081 IGLV1-51P01701 117 aa11.76□□□□□ -0.53
CLIP4-201ENST00000320081 NANOS2P60321 138 aaKnown RBP11.76□□□□□ -0.53
CLIP4-201ENST00000320081 FAM19A5Q7Z5A7 132 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-201ENST00000320081 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
CLIP4-201ENST00000320081 ATOX1O00244 68 aa11.75□□□□□ -0.53
CLIP4-201ENST00000320081 CDIP1Q9H305 208 aa11.75□□□□□ -0.53
CLIP4-201ENST00000320081 RPL37AP8A6NKH3 93 aa11.75□□□□□ -0.53
CLIP4-201ENST00000320081 CYSRT1A8MQ03 144 aa11.75□□□□□ -0.53
CLIP4-201ENST00000320081 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
CLIP4-201ENST00000320081 C6orf223Q8N319 242 aa11.74□□□□□ -0.53
CLIP4-201ENST00000320081 A0A087WVE0 104 aa11.74□□□□□ -0.53
CLIP4-201ENST00000320081 AMELXQ99217 191 aa11.73□□□□□ -0.53
CLIP4-201ENST00000320081 UTP20O75691 2785 aaKnown RBP11.73□□□□□ -0.53
CLIP4-201ENST00000320081 SMIM9A6NGZ8 99 aa11.73□□□□□ -0.53
CLIP4-201ENST00000320081 UPK3BQ9BT76 320 aa11.72□□□□□ -0.53
CLIP4-201ENST00000320081 FHL2Q14192 279 aa11.72□□□□□ -0.53
CLIP4-201ENST00000320081 NSD1Q96L73 2696 aaPredicted RBP11.72□□□□□ -0.53
CLIP4-201ENST00000320081 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
CLIP4-201ENST00000320081 SMCPP49901 116 aaPredicted RBP11.72□□□□□ -0.53
CLIP4-201ENST00000320081 MIFP14174 115 aa11.71□□□□□ -0.53
CLIP4-201ENST00000320081 A0A087WYN8 130 aa11.71□□□□□ -0.54
CLIP4-201ENST00000320081 NTM-AS1Q6ZSK4 140 aa11.71□□□□□ -0.54
CLIP4-201ENST00000320081 Q8N2B8 174 aa11.71□□□□□ -0.54
CLIP4-201ENST00000320081 PPDPFQ9H3Y8 114 aa11.7□□□□□ -0.54
CLIP4-201ENST00000320081 BAHCC1Q9P281 2608 aa11.69□□□□□ -0.54
CLIP4-201ENST00000320081 M0R2N4 97 aa11.69□□□□□ -0.54
CLIP4-201ENST00000320081 UBE2AP49459 152 aa11.69□□□□□ -0.54
CLIP4-201ENST00000320081 A0A0J9YWU9 116 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 CCKP06307 115 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 SYCNQ0VAF6 134 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 Q6ZTC4 211 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 Q8N3U1 123 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 PRO0461Q9UI25 63 aa11.68□□□□□ -0.54
CLIP4-201ENST00000320081 TIMM17BO60830 172 aa11.67□□□□□ -0.54
CLIP4-201ENST00000320081 LINC00337Q8N6G1 96 aa11.66□□□□□ -0.54
CLIP4-201ENST00000320081 BPY2O14599 106 aa11.65□□□□□ -0.55
CLIP4-201ENST00000320081 CELSR2Q9HCU4 2923 aa11.64□□□□□ -0.55
CLIP4-201ENST00000320081 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
CLIP4-201ENST00000320081 SNURFQ9Y675 71 aa11.64□□□□□ -0.55
CLIP4-201ENST00000320081 A0A087WZ39 114 aa11.63□□□□□ -0.55
CLIP4-201ENST00000320081 LELP1Q5T871 98 aa11.63□□□□□ -0.55
CLIP4-201ENST00000320081 FAM19A1Q7Z5A9 133 aa11.63□□□□□ -0.55
CLIP4-201ENST00000320081 PRR4Q16378 134 aa11.62□□□□□ -0.55
CLIP4-201ENST00000320081 TRBV10-3A0A0K0K1G6 114 aa11.62□□□□□ -0.55
CLIP4-201ENST00000320081 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
CLIP4-201ENST00000320081 USP17L23D6RBM5 183 aa11.62□□□□□ -0.55
CLIP4-201ENST00000320081 WFDC10BQ8IUB3 73 aa11.62□□□□□ -0.55
CLIP4-201ENST00000320081 FAM19A4Q96LR4 140 aa11.61□□□□□ -0.55
CLIP4-201ENST00000320081 H0Y9J4 135 aa11.61□□□□□ -0.55
CLIP4-201ENST00000320081 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
CLIP4-201ENST00000320081 ITPR2Q14571 2701 aa11.6□□□□□ -0.55
CLIP4-201ENST00000320081 Q8IZM0 81 aa11.6□□□□□ -0.55
CLIP4-201ENST00000320081 ZFHX4Q86UP3 3567 aa11.6□□□□□ -0.55
CLIP4-201ENST00000320081 EIF4EBP3O60516 100 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-201ENST00000320081 RELNP78509 3460 aa11.59□□□□□ -0.55
CLIP4-201ENST00000320081 C5orf47Q569G3 176 aa11.59□□□□□ -0.55
CLIP4-201ENST00000320081 SOSTDC1Q6X4U4 206 aa11.58□□□□□ -0.56
CLIP4-201ENST00000320081 SHISA2Q6UWI4 295 aa11.58□□□□□ -0.56
CLIP4-201ENST00000320081 ZNF73O43830 326 aaPredicted RBP11.57□□□□□ -0.56
CLIP4-201ENST00000320081 FHL3Q13643 280 aa11.57□□□□□ -0.56
CLIP4-201ENST00000320081 SVIPQ8NHG7 77 aa11.57□□□□□ -0.56
CLIP4-201ENST00000320081 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
CLIP4-201ENST00000320081 UQCRQO14949 82 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms