RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 HERVK_113P63121 156 aa10.03□□□□□ -0.8
HDDC2-201ENST00000318787 SEC11AP67812 179 aa10.03□□□□□ -0.8
HDDC2-201ENST00000318787 KIAA0087Q14695 138 aa10.03□□□□□ -0.8
HDDC2-201ENST00000318787 Q6ZRP5 223 aa10.02□□□□□ -0.8
HDDC2-201ENST00000318787 CDKN2A-AS1Q9UH64 79 aa10.02□□□□□ -0.8
HDDC2-201ENST00000318787 C6orf226Q5I0X4 101 aa10.01□□□□□ -0.81
HDDC2-201ENST00000318787 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
HDDC2-201ENST00000318787 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
HDDC2-201ENST00000318787 LINC00469Q8N7U9 141 aa10.01□□□□□ -0.81
HDDC2-201ENST00000318787 FAM168BA1KXE4 195 aa10.01□□□□□ -0.81
HDDC2-201ENST00000318787 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
HDDC2-201ENST00000318787 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
HDDC2-201ENST00000318787 NDUFA6P56556 154 aa10□□□□□ -0.81
HDDC2-201ENST00000318787 LINC01546A6NGU7 62 aa9.99□□□□□ -0.81
HDDC2-201ENST00000318787 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
HDDC2-201ENST00000318787 FAM19A3Q7Z5A8 133 aa9.99□□□□□ -0.81
HDDC2-201ENST00000318787 TLX1NBP0CAT3 122 aa9.98□□□□□ -0.81
HDDC2-201ENST00000318787 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
HDDC2-201ENST00000318787 Q8IZM0 81 aa9.98□□□□□ -0.81
HDDC2-201ENST00000318787 C18orf32Q8TCD1 76 aa9.98□□□□□ -0.81
HDDC2-201ENST00000318787 PMVKQ15126 192 aa9.97□□□□□ -0.81
HDDC2-201ENST00000318787 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
HDDC2-201ENST00000318787 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
HDDC2-201ENST00000318787 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
HDDC2-201ENST00000318787 LINC00614P0C842 121 aa9.96□□□□□ -0.82
HDDC2-201ENST00000318787 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.82
HDDC2-201ENST00000318787 SPINK8P0C7L1 97 aa9.95□□□□□ -0.82
HDDC2-201ENST00000318787 C1orf137Q5JT78 98 aa9.95□□□□□ -0.82
HDDC2-201ENST00000318787 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
HDDC2-201ENST00000318787 M0QXV9 152 aa9.94□□□□□ -0.82
HDDC2-201ENST00000318787 GHRHP01286 108 aa9.94□□□□□ -0.82
HDDC2-201ENST00000318787 HBDP02042 147 aa9.94□□□□□ -0.82
HDDC2-201ENST00000318787 URB1-AS1Q96HZ7 61 aa9.94□□□□□ -0.82
HDDC2-201ENST00000318787 F8VRH5 84 aa9.93□□□□□ -0.82
HDDC2-201ENST00000318787 UBE2BP63146 152 aa9.93□□□□□ -0.82
HDDC2-201ENST00000318787 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
HDDC2-201ENST00000318787 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
HDDC2-201ENST00000318787 A0A096LNJ9 63 aa9.92□□□□□ -0.82
HDDC2-201ENST00000318787 RAB5BP61020 215 aa9.92□□□□□ -0.82
HDDC2-201ENST00000318787 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
HDDC2-201ENST00000318787 CBLN2Q8IUK8 224 aa9.92□□□□□ -0.82
HDDC2-201ENST00000318787 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
HDDC2-201ENST00000318787 H3BRM9 83 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 CXCL5P42830 114 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 XP32Q5T750 250 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 SERTAD4-AS1Q5TG53 156 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 REG3GQ6UW15 175 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 HMCN2Q8NDA2 5059 aa9.91□□□□□ -0.82
HDDC2-201ENST00000318787 IGLV5-45A0A087WSX0 123 aa9.89□□□□□ -0.83
HDDC2-201ENST00000318787 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
HDDC2-201ENST00000318787 BAGE3Q86Y29 109 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 KRTAP7-1Q8IUC3 87 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 SLC7A5P1Q8MH63 180 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 ATP5LO75964 103 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 IGLC3P0DOY3 106 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 SRSF9Q13242 221 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDDC2-201ENST00000318787 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 YPEL4Q96NS1 127 aa9.88□□□□□ -0.83
HDDC2-201ENST00000318787 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
HDDC2-201ENST00000318787 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
HDDC2-201ENST00000318787 TMEM170BQ5T4T1 132 aa9.86□□□□□ -0.83
HDDC2-201ENST00000318787 LINC01600Q96MT4 127 aa9.86□□□□□ -0.83
HDDC2-201ENST00000318787 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
HDDC2-201ENST00000318787 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
HDDC2-201ENST00000318787 C11orf86A6NJI1 115 aa9.83□□□□□ -0.84
HDDC2-201ENST00000318787 HSBP1O75506 76 aa9.83□□□□□ -0.84
HDDC2-201ENST00000318787 PFN2P35080 140 aa9.83□□□□□ -0.84
HDDC2-201ENST00000318787 ODF1Q14990 250 aa9.83□□□□□ -0.84
HDDC2-201ENST00000318787 CHCHD1Q96BP2 118 aaKnown RBP9.83□□□□□ -0.84
HDDC2-201ENST00000318787 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
HDDC2-201ENST00000318787 H0Y8G0 127 aa9.82□□□□□ -0.84
HDDC2-201ENST00000318787 TRGC2P03986 189 aa9.82□□□□□ -0.84
HDDC2-201ENST00000318787 FAM19A2Q8N3H0 131 aa9.82□□□□□ -0.84
HDDC2-201ENST00000318787 DIRC1Q969H9 104 aa9.81□□□□□ -0.84
HDDC2-201ENST00000318787 IFI27L1Q96BM0 104 aa9.81□□□□□ -0.84
HDDC2-201ENST00000318787 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
HDDC2-201ENST00000318787 LBHQ53QV2 105 aaPredicted RBP9.8□□□□□ -0.84
HDDC2-201ENST00000318787 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
HDDC2-201ENST00000318787 TNXBP22105 4242 aa9.79□□□□□ -0.84
HDDC2-201ENST00000318787 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
HDDC2-201ENST00000318787 IGLV5-39A0A0G2JS06 123 aa9.78□□□□□ -0.84
HDDC2-201ENST00000318787 RPL37AP8A6NKH3 93 aa9.78□□□□□ -0.84
HDDC2-201ENST00000318787 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
HDDC2-201ENST00000318787 UBR4Q5T4S7 5183 aa9.78□□□□□ -0.84
HDDC2-201ENST00000318787 H0Y9J4 135 aa9.77□□□□□ -0.84
HDDC2-201ENST00000318787 ERG28Q9UKR5 140 aa9.77□□□□□ -0.84
HDDC2-201ENST00000318787 SERF1AO75920 110 aa9.75□□□□□ -0.85
HDDC2-201ENST00000318787 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
HDDC2-201ENST00000318787 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
HDDC2-201ENST00000318787 LINC00167Q96N53 147 aa9.75□□□□□ -0.85
HDDC2-201ENST00000318787 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
HDDC2-201ENST00000318787 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
HDDC2-201ENST00000318787 NUPR1O60356 82 aa9.74□□□□□ -0.85
HDDC2-201ENST00000318787 SCO1O75880 301 aa9.74□□□□□ -0.85
HDDC2-201ENST00000318787 LEPROTL1O95214 131 aa9.74□□□□□ -0.85
HDDC2-201ENST00000318787 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
HDDC2-201ENST00000318787 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
HDDC2-201ENST00000318787 FABP4P15090 132 aa9.73□□□□□ -0.85
HDDC2-201ENST00000318787 SND1-IT1Q9HBX3 110 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms