RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 C1orf158Q8N1D5 194 aa11.35□□□□□ -0.59
CRAT-201ENST00000318080 MAST4O15021 2626 aa11.35□□□□□ -0.59
CRAT-201ENST00000318080 HILS1P60008 231 aa11.34□□□□□ -0.59
CRAT-201ENST00000318080 DNAL4O96015 105 aa11.34□□□□□ -0.59
CRAT-201ENST00000318080 DYNLRB2Q8TF09 96 aa11.34□□□□□ -0.59
CRAT-201ENST00000318080 DEFB114Q30KQ6 69 aa11.33□□□□□ -0.59
CRAT-201ENST00000318080 C11orf44Q8N8P7 122 aa11.33□□□□□ -0.59
CRAT-201ENST00000318080 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
CRAT-201ENST00000318080 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
CRAT-201ENST00000318080 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
CRAT-201ENST00000318080 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
CRAT-201ENST00000318080 TMEM258P61165 79 aa11.33□□□□□ -0.6
CRAT-201ENST00000318080 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
CRAT-201ENST00000318080 SMIM11BQ8TCY0 68 aa11.32□□□□□ -0.6
CRAT-201ENST00000318080 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
CRAT-201ENST00000318080 LINC01561Q8N1V8 128 aa11.32□□□□□ -0.6
CRAT-201ENST00000318080 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
CRAT-201ENST00000318080 CDC42SE2Q9NRR3 84 aa11.32□□□□□ -0.6
CRAT-201ENST00000318080 LOC100131303A0A0U1RQF7 123 aa11.31□□□□□ -0.6
CRAT-201ENST00000318080 HIST1H4AP62805 103 aaKnown RBP11.31□□□□□ -0.6
CRAT-201ENST00000318080 LECT2O14960 151 aa11.31□□□□□ -0.6
CRAT-201ENST00000318080 PRO0628Q9UI54 55 aa11.31□□□□□ -0.6
CRAT-201ENST00000318080 CXCL5P42830 114 aa11.3□□□□□ -0.6
CRAT-201ENST00000318080 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
CRAT-201ENST00000318080 TENM1Q9UKZ4 2725 aa11.3□□□□□ -0.6
CRAT-201ENST00000318080 ATOX1O00244 68 aa11.29□□□□□ -0.6
CRAT-201ENST00000318080 CRPP02741 224 aa11.29□□□□□ -0.6
CRAT-201ENST00000318080 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
CRAT-201ENST00000318080 PFN2P35080 140 aa11.29□□□□□ -0.6
CRAT-201ENST00000318080 K7EQD1 137 aa11.29□□□□□ -0.6
CRAT-201ENST00000318080 RPL36AP83881 106 aaKnown RBP11.29□□□□□ -0.6
CRAT-201ENST00000318080 RPL36ALQ969Q0 106 aaKnown RBP11.29□□□□□ -0.6
CRAT-201ENST00000318080 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
CRAT-201ENST00000318080 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
CRAT-201ENST00000318080 LINC00158P58513 81 aa11.28□□□□□ -0.6
CRAT-201ENST00000318080 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
CRAT-201ENST00000318080 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.61
CRAT-201ENST00000318080 IL17DQ8TAD2 202 aa11.27□□□□□ -0.61
CRAT-201ENST00000318080 USP17L23D6RBM5 183 aa11.27□□□□□ -0.61
CRAT-201ENST00000318080 STHQ8IWL8 128 aa11.27□□□□□ -0.61
CRAT-201ENST00000318080 C4orf3Q8WVX3 66 aa11.26□□□□□ -0.61
CRAT-201ENST00000318080 UPK3BQ9BT76 320 aa11.26□□□□□ -0.61
CRAT-201ENST00000318080 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
CRAT-201ENST00000318080 ATRQ13535 2644 aa11.25□□□□□ -0.61
CRAT-201ENST00000318080 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
CRAT-201ENST00000318080 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
CRAT-201ENST00000318080 TRAV23DV6A0A075B6W5 121 aa11.24□□□□□ -0.61
CRAT-201ENST00000318080 FHL2Q14192 279 aa11.24□□□□□ -0.61
CRAT-201ENST00000318080 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
CRAT-201ENST00000318080 CCL18P55774 89 aa11.23□□□□□ -0.61
CRAT-201ENST00000318080 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
CRAT-201ENST00000318080 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
CRAT-201ENST00000318080 SERP2Q8N6R1 65 aa11.23□□□□□ -0.61
CRAT-201ENST00000318080 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
CRAT-201ENST00000318080 VWFP04275 2813 aa11.23□□□□□ -0.61
CRAT-201ENST00000318080 IGLV4-60A0A075B6I1 120 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 V9GYY9 64 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 FAM236DA0A1B0GTK5 79 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 UBE2L6O14933 153 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 FAM236CP0DP71 79 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 PAX4O43316 350 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 COX7B2Q8TF08 81 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 TMEM243Q9BU79 118 aa11.22□□□□□ -0.61
CRAT-201ENST00000318080 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.61
CRAT-201ENST00000318080 GIG44P09565 113 aaPredicted RBP11.21□□□□□ -0.61
CRAT-201ENST00000318080 COPS9Q8WXC6 57 aa11.2□□□□□ -0.62
CRAT-201ENST00000318080 A0A0U1RQV1 116 aa11.19□□□□□ -0.62
CRAT-201ENST00000318080 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
CRAT-201ENST00000318080 SS18Q15532 418 aa11.19□□□□□ -0.62
CRAT-201ENST00000318080 Q6JHZ5 121 aa11.19□□□□□ -0.62
CRAT-201ENST00000318080 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
CRAT-201ENST00000318080 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
CRAT-201ENST00000318080 FBN1P35555 2871 aaKnown RBP11.18□□□□□ -0.62
CRAT-201ENST00000318080 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
CRAT-201ENST00000318080 GHRHP01286 108 aa11.17□□□□□ -0.62
CRAT-201ENST00000318080 LINC01006Q8NI28 216 aa11.16□□□□□ -0.62
CRAT-201ENST00000318080 C20orf197Q8N268 126 aa11.16□□□□□ -0.62
CRAT-201ENST00000318080 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.63
CRAT-201ENST00000318080 OBSCN-AS1Q96MR7 158 aa11.14□□□□□ -0.63
CRAT-201ENST00000318080 CCL24O00175 119 aa11.13□□□□□ -0.63
CRAT-201ENST00000318080 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
CRAT-201ENST00000318080 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
CRAT-201ENST00000318080 PF4P02776 101 aa11.13□□□□□ -0.63
CRAT-201ENST00000318080 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
CRAT-201ENST00000318080 TRBV6-8A0A0A6YYG3 113 aa11.1□□□□□ -0.63
CRAT-201ENST00000318080 M0R2N4 97 aa11.1□□□□□ -0.63
CRAT-201ENST00000318080 C1orf195Q5TG92 126 aa11.1□□□□□ -0.63
CRAT-201ENST00000318080 STAB1Q9NY15 2570 aa11.09□□□□□ -0.63
CRAT-201ENST00000318080 H0YGX0 51 aa11.09□□□□□ -0.63
CRAT-201ENST00000318080 CCKP06307 115 aa11.09□□□□□ -0.63
CRAT-201ENST00000318080 KRTAP10-3P60369 221 aa11.09□□□□□ -0.63
CRAT-201ENST00000318080 TRBV6-4A0A1B0GX49 114 aa11.09□□□□□ -0.63
CRAT-201ENST00000318080 A0A087WZ39 114 aa11.08□□□□□ -0.64
CRAT-201ENST00000318080 XCL1P47992 114 aa11.08□□□□□ -0.64
CRAT-201ENST00000318080 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.64
CRAT-201ENST00000318080 BRK1Q8WUW1 75 aa11.07□□□□□ -0.64
CRAT-201ENST00000318080 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
CRAT-201ENST00000318080 IBA57-AS1B1ANH7 110 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms