RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 OBSCN-AS1Q96MR7 158 aa9.39□□□□□ -0.91
SKA3-202ENST00000314759 UPK3BQ9BT76 320 aa9.39□□□□□ -0.91
SKA3-202ENST00000314759 OXTP01178 125 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 Q6JHZ5 121 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 PAX4O43316 350 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 FHL2Q14192 279 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 DPH3Q96FX2 82 aa9.38□□□□□ -0.91
SKA3-202ENST00000314759 RPS28P62857 69 aaKnown RBP9.37□□□□□ -0.91
SKA3-202ENST00000314759 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
SKA3-202ENST00000314759 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
SKA3-202ENST00000314759 DEFB113Q30KQ7 82 aa9.37□□□□□ -0.91
SKA3-202ENST00000314759 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
SKA3-202ENST00000314759 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
SKA3-202ENST00000314759 DNAJC9-AS1A6NH13 148 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 HILS1P60008 231 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 TMEM86BQ8N661 226 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
SKA3-202ENST00000314759 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 SS18Q15532 418 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 WFDC9Q8NEX5 89 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
SKA3-202ENST00000314759 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
SKA3-202ENST00000314759 PRB1P04280 392 aa9.34□□□□□ -0.91
SKA3-202ENST00000314759 ESM1Q9NQ30 184 aa9.34□□□□□ -0.91
SKA3-202ENST00000314759 LY6G6DO95868 133 aa9.33□□□□□ -0.92
SKA3-202ENST00000314759 ITPR3Q14573 2671 aa9.33□□□□□ -0.92
SKA3-202ENST00000314759 CMC4P56277 68 aaPredicted RBP9.32□□□□□ -0.92
SKA3-202ENST00000314759 TMEM258P61165 79 aa9.32□□□□□ -0.92
SKA3-202ENST00000314759 XCL1P47992 114 aa9.32□□□□□ -0.92
SKA3-202ENST00000314759 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
SKA3-202ENST00000314759 FN1P02751 2386 aaKnown RBP9.32□□□□□ -0.92
SKA3-202ENST00000314759 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
SKA3-202ENST00000314759 APCP25054 2843 aa9.31□□□□□ -0.92
SKA3-202ENST00000314759 IGLV1-51P01701 117 aa9.3□□□□□ -0.92
SKA3-202ENST00000314759 DEFB130BP0DP73 79 aa9.3□□□□□ -0.92
SKA3-202ENST00000314759 DEFB130AP0DP74 79 aa9.3□□□□□ -0.92
SKA3-202ENST00000314759 UBR5O95071 2799 aaPredicted RBP9.3□□□□□ -0.92
SKA3-202ENST00000314759 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
SKA3-202ENST00000314759 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
SKA3-202ENST00000314759 CCKP06307 115 aa9.29□□□□□ -0.92
SKA3-202ENST00000314759 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
SKA3-202ENST00000314759 TRAV23DV6A0A075B6W5 121 aa9.28□□□□□ -0.92
SKA3-202ENST00000314759 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
SKA3-202ENST00000314759 CLPSL2Q6UWE3 100 aa9.28□□□□□ -0.92
SKA3-202ENST00000314759 Q8IZM0 81 aa9.28□□□□□ -0.92
SKA3-202ENST00000314759 USP24Q9UPU5 2620 aa9.28□□□□□ -0.92
SKA3-202ENST00000314759 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
SKA3-202ENST00000314759 GYPEP15421 78 aa9.27□□□□□ -0.93
SKA3-202ENST00000314759 FLNAP21333 2647 aaKnown RBP9.27□□□□□ -0.93
SKA3-202ENST00000314759 GHRHP01286 108 aa9.27□□□□□ -0.93
SKA3-202ENST00000314759 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
SKA3-202ENST00000314759 A0A1B0GUV1 79 aa9.26□□□□□ -0.93
SKA3-202ENST00000314759 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
SKA3-202ENST00000314759 Q5XG85 94 aa9.25□□□□□ -0.93
SKA3-202ENST00000314759 Q8N814 137 aa9.25□□□□□ -0.93
SKA3-202ENST00000314759 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
SKA3-202ENST00000314759 MTORP42345 2549 aa9.25□□□□□ -0.93
SKA3-202ENST00000314759 A0A096LPF7 62 aa9.25□□□□□ -0.93
SKA3-202ENST00000314759 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
SKA3-202ENST00000314759 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
SKA3-202ENST00000314759 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
SKA3-202ENST00000314759 RNASE1P07998 156 aaKnown RBP9.24□□□□□ -0.93
SKA3-202ENST00000314759 GCN1Q92616 2671 aaKnown RBP9.24□□□□□ -0.93
SKA3-202ENST00000314759 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
SKA3-202ENST00000314759 LINC00612Q8N6U2 182 aa9.23□□□□□ -0.93
SKA3-202ENST00000314759 ACANP16112 2415 aa9.22□□□□□ -0.93
SKA3-202ENST00000314759 JMJD7-PLA2G4BH0Y9G9 81 aa9.22□□□□□ -0.93
SKA3-202ENST00000314759 TMEM256-PLSCR3K7ERE1 68 aa9.22□□□□□ -0.93
SKA3-202ENST00000314759 NDUFC2O95298 119 aa9.21□□□□□ -0.93
SKA3-202ENST00000314759 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.93
SKA3-202ENST00000314759 C20orf197Q8N268 126 aa9.21□□□□□ -0.93
SKA3-202ENST00000314759 LINC00269Q8N2A0 174 aa9.21□□□□□ -0.93
SKA3-202ENST00000314759 Q8NDZ9 215 aa9.21□□□□□ -0.94
SKA3-202ENST00000314759 C16orf95Q9H693 158 aa9.21□□□□□ -0.94
SKA3-202ENST00000314759 COX17Q14061 63 aa9.2□□□□□ -0.94
SKA3-202ENST00000314759 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
SKA3-202ENST00000314759 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
SKA3-202ENST00000314759 IGLV10-54A0A075B6I4 117 aa9.19□□□□□ -0.94
SKA3-202ENST00000314759 CD164L2Q6UWJ8 174 aa9.19□□□□□ -0.94
SKA3-202ENST00000314759 Q8N3U1 123 aa9.19□□□□□ -0.94
SKA3-202ENST00000314759 ZNF843Q8N446 348 aa9.19□□□□□ -0.94
SKA3-202ENST00000314759 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
SKA3-202ENST00000314759 S100A7L2Q5SY68 101 aa9.19□□□□□ -0.94
SKA3-202ENST00000314759 CHCHD10Q8WYQ3 142 aaPredicted RBP9.19□□□□□ -0.94
SKA3-202ENST00000314759 WIPF1O43516 503 aa9.18□□□□□ -0.94
SKA3-202ENST00000314759 M0R2N4 97 aa9.18□□□□□ -0.94
SKA3-202ENST00000314759 X6R8D5 127 aa9.18□□□□□ -0.94
SKA3-202ENST00000314759 IGHV4-28A0A0C4DH34 117 aa9.18□□□□□ -0.94
SKA3-202ENST00000314759 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
SKA3-202ENST00000314759 ANK3Q12955 4377 aaKnown RBP9.16□□□□□ -0.94
SKA3-202ENST00000314759 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
SKA3-202ENST00000314759 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.94
SKA3-202ENST00000314759 REG3AQ06141 175 aa9.15□□□□□ -0.94
SKA3-202ENST00000314759 LINC00575Q6W349 94 aa9.15□□□□□ -0.94
SKA3-202ENST00000314759 KRTAP1-1Q07627 177 aa9.14□□□□□ -0.95
SKA3-202ENST00000314759 SPATA3Q8NHX4 192 aa9.14□□□□□ -0.95
SKA3-202ENST00000314759 C10orf25Q5T742 122 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms