RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
PPP1CA-201ENST00000312989 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
PPP1CA-201ENST00000312989 LINC01600Q96MT4 127 aa8.96□□□□□ -0.98
PPP1CA-201ENST00000312989 CST9LQ9H4G1 147 aa8.96□□□□□ -0.98
PPP1CA-201ENST00000312989 NDUFC2-KCTD14E9PQ53 114 aa8.95□□□□□ -0.98
PPP1CA-201ENST00000312989 TINCRA0A1B0GVN0 87 aa8.94□□□□□ -0.98
PPP1CA-201ENST00000312989 SEC11AP67812 179 aa8.94□□□□□ -0.98
PPP1CA-201ENST00000312989 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
PPP1CA-201ENST00000312989 SERTAD4-AS1Q5TG53 156 aa8.94□□□□□ -0.98
PPP1CA-201ENST00000312989 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
PPP1CA-201ENST00000312989 LINC01549A6NIU2 74 aa8.93□□□□□ -0.98
PPP1CA-201ENST00000312989 FA2HQ7L5A8 372 aa8.93□□□□□ -0.98
PPP1CA-201ENST00000312989 SVBPQ8N300 66 aa8.93□□□□□ -0.98
PPP1CA-201ENST00000312989 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
PPP1CA-201ENST00000312989 KRTAP10-8P60410 259 aa8.92□□□□□ -0.98
PPP1CA-201ENST00000312989 ODF1Q14990 250 aa8.92□□□□□ -0.98
PPP1CA-201ENST00000312989 FAM19A5Q7Z5A7 132 aaPredicted RBP8.92□□□□□ -0.98
PPP1CA-201ENST00000312989 TRAPPC1Q9Y5R8 145 aa8.92□□□□□ -0.98
PPP1CA-201ENST00000312989 SNAPINO95295 136 aa8.91□□□□□ -0.98
PPP1CA-201ENST00000312989 PMVKQ15126 192 aa8.91□□□□□ -0.98
PPP1CA-201ENST00000312989 PDZD11Q5EBL8 140 aa8.91□□□□□ -0.98
PPP1CA-201ENST00000312989 LINC00469Q8N7U9 141 aa8.91□□□□□ -0.98
PPP1CA-201ENST00000312989 PACRGQ96M98 296 aaPredicted RBP8.91□□□□□ -0.98
PPP1CA-201ENST00000312989 GEMIN7Q9H840 131 aaKnown RBP8.91□□□□□ -0.98
PPP1CA-201ENST00000312989 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
PPP1CA-201ENST00000312989 F8VRH5 84 aa8.89□□□□□ -0.99
PPP1CA-201ENST00000312989 PRSS2P07478 247 aa8.89□□□□□ -0.99
PPP1CA-201ENST00000312989 LINC00614P0C842 121 aa8.89□□□□□ -0.99
PPP1CA-201ENST00000312989 IGLC3P0DOY3 106 aa8.89□□□□□ -0.99
PPP1CA-201ENST00000312989 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
PPP1CA-201ENST00000312989 SMCO4Q9NRQ5 59 aa8.89□□□□□ -0.99
PPP1CA-201ENST00000312989 LRP2P98164 4655 aa8.88□□□□□ -0.99
PPP1CA-201ENST00000312989 M0QXV9 152 aa8.88□□□□□ -0.99
PPP1CA-201ENST00000312989 CKS1BP61024 79 aa8.88□□□□□ -0.99
PPP1CA-201ENST00000312989 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
PPP1CA-201ENST00000312989 IGLV5-39A0A0G2JS06 123 aa8.87□□□□□ -0.99
PPP1CA-201ENST00000312989 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
PPP1CA-201ENST00000312989 SPINK8P0C7L1 97 aa8.87□□□□□ -0.99
PPP1CA-201ENST00000312989 CXCL5P42830 114 aa8.87□□□□□ -0.99
PPP1CA-201ENST00000312989 NDUFA5Q16718 116 aa8.87□□□□□ -0.99
PPP1CA-201ENST00000312989 HBDP02042 147 aa8.86□□□□□ -0.99
PPP1CA-201ENST00000312989 ZNF22P17026 224 aaPredicted RBP8.86□□□□□ -0.99
PPP1CA-201ENST00000312989 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
PPP1CA-201ENST00000312989 XAGE1AQ9HD64 81 aa8.86□□□□□ -0.99
PPP1CA-201ENST00000312989 CBLN2Q8IUK8 224 aa8.86□□□□□ -0.99
PPP1CA-201ENST00000312989 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
PPP1CA-201ENST00000312989 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
PPP1CA-201ENST00000312989 C22orf24Q9Y442 160 aa8.84□□□□□ -0.99
PPP1CA-201ENST00000312989 C11orf86A6NJI1 115 aa8.83□□□□□ -1
PPP1CA-201ENST00000312989 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
PPP1CA-201ENST00000312989 LINC00310P59036 64 aa8.82□□□□□ -1
PPP1CA-201ENST00000312989 H0Y9J4 135 aa8.81□□□□□ -1
PPP1CA-201ENST00000312989 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
PPP1CA-201ENST00000312989 ATP5LO75964 103 aa8.8□□□□□ -1
PPP1CA-201ENST00000312989 RAB5BP61020 215 aa8.8□□□□□ -1
PPP1CA-201ENST00000312989 UBE2BP63146 152 aa8.8□□□□□ -1
PPP1CA-201ENST00000312989 SLC7A5P1Q8MH63 180 aa8.8□□□□□ -1
PPP1CA-201ENST00000312989 IGLV5-37A0A075B6J1 123 aa8.79□□□□□ -1
PPP1CA-201ENST00000312989 H3BRM9 83 aa8.79□□□□□ -1
PPP1CA-201ENST00000312989 BAGE3Q86Y29 109 aa8.79□□□□□ -1
PPP1CA-201ENST00000312989 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
PPP1CA-201ENST00000312989 NDUFA6P56556 154 aa8.78□□□□□ -1
PPP1CA-201ENST00000312989 DIRC1Q969H9 104 aa8.78□□□□□ -1
PPP1CA-201ENST00000312989 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
PPP1CA-201ENST00000312989 Q8NDZ9 215 aa8.77□□□□□ -1.01
PPP1CA-201ENST00000312989 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
PPP1CA-201ENST00000312989 RNF213Q63HN8 5207 aa8.77□□□□□ -1.01
PPP1CA-201ENST00000312989 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
PPP1CA-201ENST00000312989 TRGC2P03986 189 aa8.76□□□□□ -1.01
PPP1CA-201ENST00000312989 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
PPP1CA-201ENST00000312989 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
PPP1CA-201ENST00000312989 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
PPP1CA-201ENST00000312989 TMEM223A0PJW6 202 aa8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 COLCA2A8K830 154 aa8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 NUPR1O60356 82 aa8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 ZNF861PO60384 105 aa8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 LBHQ53QV2 105 aaPredicted RBP8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 FAM19A2Q8N3H0 131 aa8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 IFI27L1Q96BM0 104 aa8.74□□□□□ -1.01
PPP1CA-201ENST00000312989 SCO1O75880 301 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 TMEM170BQ5T4T1 132 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 KRTAP13-1Q8IUC0 172 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 LPAP08519 4548 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 VPREB1P12018 145 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 PFN2P35080 140 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 SND1-IT1Q9HBX3 110 aa8.73□□□□□ -1.01
PPP1CA-201ENST00000312989 RPL37AP8A6NKH3 93 aa8.72□□□□□ -1.01
PPP1CA-201ENST00000312989 BCE1O60756 84 aa8.72□□□□□ -1.01
PPP1CA-201ENST00000312989 GAGE10A6NGK3 116 aa8.71□□□□□ -1.02
PPP1CA-201ENST00000312989 SERF1AO75920 110 aa8.71□□□□□ -1.02
PPP1CA-201ENST00000312989 HSBP1O75506 76 aa8.7□□□□□ -1.02
PPP1CA-201ENST00000312989 COX17Q14061 63 aa8.7□□□□□ -1.02
PPP1CA-201ENST00000312989 IGLV1-50A0A075B6I6 118 aa8.69□□□□□ -1.02
PPP1CA-201ENST00000312989 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
PPP1CA-201ENST00000312989 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
PPP1CA-201ENST00000312989 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
PPP1CA-201ENST00000312989 A0A087X002 238 aa8.65□□□□□ -1.02
PPP1CA-201ENST00000312989 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
PPP1CA-201ENST00000312989 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms