RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
CLCF1-201ENST00000312438 A0A1W2PPM0 123 aa11.28□□□□□ -0.6
CLCF1-201ENST00000312438 UBE2V1Q13404 147 aa11.28□□□□□ -0.6
CLCF1-201ENST00000312438 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
CLCF1-201ENST00000312438 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 CXCL5P42830 114 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 CKS1BP61024 79 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 NPC2P61916 151 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 PRO1854Q9UHT4 67 aa11.27□□□□□ -0.61
CLCF1-201ENST00000312438 A0A0B4J2C4 111 aa11.26□□□□□ -0.61
CLCF1-201ENST00000312438 HUWE1Q7Z6Z7 4374 aaKnown RBP11.26□□□□□ -0.61
CLCF1-201ENST00000312438 FABP2P12104 132 aa11.25□□□□□ -0.61
CLCF1-201ENST00000312438 PPDPFQ9H3Y8 114 aa11.25□□□□□ -0.61
CLCF1-201ENST00000312438 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
CLCF1-201ENST00000312438 LINC00158P58513 81 aa11.24□□□□□ -0.61
CLCF1-201ENST00000312438 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
CLCF1-201ENST00000312438 GAGE10A6NGK3 116 aa11.23□□□□□ -0.61
CLCF1-201ENST00000312438 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
CLCF1-201ENST00000312438 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
CLCF1-201ENST00000312438 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
CLCF1-201ENST00000312438 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
CLCF1-201ENST00000312438 GTF2H5Q6ZYL4 71 aa11.23□□□□□ -0.61
CLCF1-201ENST00000312438 TSPAN13O95857 204 aa11.22□□□□□ -0.61
CLCF1-201ENST00000312438 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CLCF1-201ENST00000312438 C1orf43Q9BWL3 253 aa11.22□□□□□ -0.61
CLCF1-201ENST00000312438 PFN2P35080 140 aa11.21□□□□□ -0.61
CLCF1-201ENST00000312438 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
CLCF1-201ENST00000312438 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
CLCF1-201ENST00000312438 SPCS1Q9Y6A9 102 aa11.21□□□□□ -0.62
CLCF1-201ENST00000312438 K7EP34 96 aa11.2□□□□□ -0.62
CLCF1-201ENST00000312438 COX17Q14061 63 aa11.2□□□□□ -0.62
CLCF1-201ENST00000312438 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
CLCF1-201ENST00000312438 IGKV2D-24A0A075B6R9 120 aa11.19□□□□□ -0.62
CLCF1-201ENST00000312438 NUPR2A6NF83 97 aa11.16□□□□□ -0.62
CLCF1-201ENST00000312438 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
CLCF1-201ENST00000312438 NTN5Q8WTR8 489 aaPredicted RBP11.16□□□□□ -0.62
CLCF1-201ENST00000312438 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
CLCF1-201ENST00000312438 Q9HAA7 133 aa11.16□□□□□ -0.62
CLCF1-201ENST00000312438 LOC107984156A0A0G2JMH3 177 aa11.15□□□□□ -0.62
CLCF1-201ENST00000312438 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
CLCF1-201ENST00000312438 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.62
CLCF1-201ENST00000312438 ARL17AQ8IVW1 177 aa11.15□□□□□ -0.62
CLCF1-201ENST00000312438 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.62
CLCF1-201ENST00000312438 H7C2G1 150 aa11.14□□□□□ -0.63
CLCF1-201ENST00000312438 Q1RN00 199 aa11.14□□□□□ -0.63
CLCF1-201ENST00000312438 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
CLCF1-201ENST00000312438 DNAH9Q9NYC9 4486 aa11.14□□□□□ -0.63
CLCF1-201ENST00000312438 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
CLCF1-201ENST00000312438 RMI2Q96E14 147 aa11.14□□□□□ -0.63
CLCF1-201ENST00000312438 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
CLCF1-201ENST00000312438 PSMB2P49721 201 aa11.13□□□□□ -0.63
CLCF1-201ENST00000312438 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
CLCF1-201ENST00000312438 SCGB1C2P0DMR2 95 aa11.12□□□□□ -0.63
CLCF1-201ENST00000312438 C9orf116Q5BN46 136 aaPredicted RBP11.12□□□□□ -0.63
CLCF1-201ENST00000312438 UBE2DNLQ8IWF7 75 aa11.12□□□□□ -0.63
CLCF1-201ENST00000312438 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
CLCF1-201ENST00000312438 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
CLCF1-201ENST00000312438 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
CLCF1-201ENST00000312438 TRBV30A0A0K0K1B3 111 aa11.11□□□□□ -0.63
CLCF1-201ENST00000312438 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
CLCF1-201ENST00000312438 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
CLCF1-201ENST00000312438 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
CLCF1-201ENST00000312438 F8WDY8 70 aa11.1□□□□□ -0.63
CLCF1-201ENST00000312438 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
CLCF1-201ENST00000312438 COL7A1Q02388 2944 aa11.1□□□□□ -0.63
CLCF1-201ENST00000312438 TRBV20-1A0A075B6N2 111 aa11.09□□□□□ -0.63
CLCF1-201ENST00000312438 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
CLCF1-201ENST00000312438 H3BMG7 143 aa11.08□□□□□ -0.64
CLCF1-201ENST00000312438 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
CLCF1-201ENST00000312438 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
CLCF1-201ENST00000312438 COX6CP09669 75 aa11.07□□□□□ -0.64
CLCF1-201ENST00000312438 DNHD1Q96M86 4753 aa11.07□□□□□ -0.64
CLCF1-201ENST00000312438 TRIAP1O43715 76 aa11.07□□□□□ -0.64
CLCF1-201ENST00000312438 NDUFC2O95298 119 aa11.05□□□□□ -0.64
CLCF1-201ENST00000312438 TCL1BO95988 128 aa11.05□□□□□ -0.64
CLCF1-201ENST00000312438 Q6ZRU5 148 aa11.05□□□□□ -0.64
CLCF1-201ENST00000312438 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
CLCF1-201ENST00000312438 F8W1H4 67 aa11.03□□□□□ -0.64
CLCF1-201ENST00000312438 SYCNQ0VAF6 134 aa11.02□□□□□ -0.64
CLCF1-201ENST00000312438 MEGF8Q7Z7M0 2845 aa11.02□□□□□ -0.64
CLCF1-201ENST00000312438 USP17L23D6RBM5 183 aa11.02□□□□□ -0.65
CLCF1-201ENST00000312438 CASC10Q5T4H9 136 aa11.02□□□□□ -0.65
CLCF1-201ENST00000312438 KRTAP1-5Q9BYS1 174 aa11.02□□□□□ -0.65
CLCF1-201ENST00000312438 ATXN8Q156A1 80 aa11□□□□□ -0.65
CLCF1-201ENST00000312438 RPL28P46779 137 aaKnown RBP11□□□□□ -0.65
CLCF1-201ENST00000312438 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
CLCF1-201ENST00000312438 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
CLCF1-201ENST00000312438 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
CLCF1-201ENST00000312438 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
CLCF1-201ENST00000312438 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
CLCF1-201ENST00000312438 PRO0461Q9UI25 63 aa10.98□□□□□ -0.65
CLCF1-201ENST00000312438 SMIM11BQ8TCY0 68 aa10.97□□□□□ -0.65
CLCF1-201ENST00000312438 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
CLCF1-201ENST00000312438 NBDYA0A0U1RRE5 68 aa10.96□□□□□ -0.65
CLCF1-201ENST00000312438 WFDC2Q14508 124 aa10.96□□□□□ -0.65
CLCF1-201ENST00000312438 TMEM126AQ9H061 195 aa10.96□□□□□ -0.65
CLCF1-201ENST00000312438 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
CLCF1-201ENST00000312438 PSCAO43653 123 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 459.3 ms