RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 CMC4P56277 68 aaPredicted RBP14.55□□□□□ -0.08
RELA-201ENST00000308639 COPS9Q8WXC6 57 aa14.54□□□□□ -0.08
RELA-201ENST00000308639 C22orf24Q9Y442 160 aa14.54□□□□□ -0.08
RELA-201ENST00000308639 J3KT08 172 aa14.53□□□□□ -0.08
RELA-201ENST00000308639 LINC00526Q96FQ7 95 aa14.53□□□□□ -0.08
RELA-201ENST00000308639 BAALC-AS2P0C853 105 aa14.52□□□□□ -0.08
RELA-201ENST00000308639 GYPEP15421 78 aa14.52□□□□□ -0.08
RELA-201ENST00000308639 CRPP02741 224 aa14.52□□□□□ -0.09
RELA-201ENST00000308639 XCL1P47992 114 aa14.52□□□□□ -0.09
RELA-201ENST00000308639 CCL18P55774 89 aa14.52□□□□□ -0.09
RELA-201ENST00000308639 NOTCH2Q04721 2471 aa14.52□□□□□ -0.09
RELA-201ENST00000308639 ACYP1P07311 99 aa14.51□□□□□ -0.09
RELA-201ENST00000308639 FAM19A5Q7Z5A7 132 aaPredicted RBP14.51□□□□□ -0.09
RELA-201ENST00000308639 DEFB4AO15263 64 aa14.51□□□□□ -0.09
RELA-201ENST00000308639 LINC00959A0A1B0GUT2 108 aa14.5□□□□□ -0.09
RELA-201ENST00000308639 A0A1B0GX51 115 aa14.5□□□□□ -0.09
RELA-201ENST00000308639 KLK5Q9Y337 293 aaPredicted RBP14.5□□□□□ -0.09
RELA-201ENST00000308639 LINC00482Q8N8I6 264 aa14.49□□□□□ -0.09
RELA-201ENST00000308639 SMIM11BQ8TCY0 68 aa14.49□□□□□ -0.09
RELA-201ENST00000308639 A0A087WZ39 114 aa14.49□□□□□ -0.09
RELA-201ENST00000308639 HILS1P60008 231 aa14.49□□□□□ -0.09
RELA-201ENST00000308639 A0A087WYN8 130 aa14.48□□□□□ -0.09
RELA-201ENST00000308639 SMCR5Q8TEV8 140 aa14.48□□□□□ -0.09
RELA-201ENST00000308639 PF4P02776 101 aa14.48□□□□□ -0.09
RELA-201ENST00000308639 Q8N3U1 123 aa14.48□□□□□ -0.09
RELA-201ENST00000308639 TRAV13-2A0A0B4J235 113 aa14.47□□□□□ -0.09
RELA-201ENST00000308639 TRACP01848 142 aa14.47□□□□□ -0.09
RELA-201ENST00000308639 TENM1Q9UKZ4 2725 aa14.47□□□□□ -0.09
RELA-201ENST00000308639 ATP5G1P05496 136 aa14.47□□□□□ -0.09
RELA-201ENST00000308639 LINC00643Q86TS7 51 aa14.47□□□□□ -0.09
RELA-201ENST00000308639 RPL28P46779 137 aaKnown RBP14.46□□□□□ -0.09
RELA-201ENST00000308639 C9orf129Q5T035 196 aaKnown RBP14.46□□□□□ -0.09
RELA-201ENST00000308639 HECTD1Q9ULT8 2610 aa14.46□□□□□ -0.1
RELA-201ENST00000308639 X6R8D5 127 aa14.46□□□□□ -0.1
RELA-201ENST00000308639 PAX4O43316 350 aa14.45□□□□□ -0.1
RELA-201ENST00000308639 C6orf226Q5I0X4 101 aa14.44□□□□□ -0.1
RELA-201ENST00000308639 COX7CP15954 63 aa14.43□□□□□ -0.1
RELA-201ENST00000308639 OR13C6PQ8NH95 151 aa14.43□□□□□ -0.1
RELA-201ENST00000308639 RPS28P62857 69 aaKnown RBP14.42□□□□□ -0.1
RELA-201ENST00000308639 OTOGQ6ZRI0 2925 aa14.42□□□□□ -0.1
RELA-201ENST00000308639 WIPF1O43516 503 aa14.42□□□□□ -0.1
RELA-201ENST00000308639 FAM222AQ5U5X8 452 aa14.42□□□□□ -0.1
RELA-201ENST00000308639 GAGE2AQ6NT46 116 aa14.42□□□□□ -0.1
RELA-201ENST00000308639 IBA57-AS1B1ANH7 110 aa14.41□□□□□ -0.1
RELA-201ENST00000308639 KIR2DL5BQ8NHK3 375 aa14.41□□□□□ -0.1
RELA-201ENST00000308639 IGLV10-54A0A075B6I4 117 aa14.41□□□□□ -0.1
RELA-201ENST00000308639 PRR3P79522 188 aaKnown RBP14.41□□□□□ -0.1
RELA-201ENST00000308639 MALP21145 153 aa14.4□□□□□ -0.1
RELA-201ENST00000308639 SLPIP03973 132 aa14.39□□□□□ -0.11
RELA-201ENST00000308639 LINC00612Q8N6U2 182 aa14.39□□□□□ -0.11
RELA-201ENST00000308639 CRYGAP11844 174 aa14.39□□□□□ -0.11
RELA-201ENST00000308639 DEFB135Q30KP9 77 aa14.39□□□□□ -0.11
RELA-201ENST00000308639 TRRAPQ9Y4A5 3859 aa14.39□□□□□ -0.11
RELA-201ENST00000308639 CXCL5P42830 114 aa14.38□□□□□ -0.11
RELA-201ENST00000308639 LECT2O14960 151 aa14.38□□□□□ -0.11
RELA-201ENST00000308639 LINC00269Q8N2A0 174 aa14.38□□□□□ -0.11
RELA-201ENST00000308639 C2orf48Q96LS8 159 aa14.38□□□□□ -0.11
RELA-201ENST00000308639 SDIM1Q6ZPB5 146 aa14.37□□□□□ -0.11
RELA-201ENST00000308639 SS18Q15532 418 aa14.37□□□□□ -0.11
RELA-201ENST00000308639 PRO0255Q9UI72 69 aa14.37□□□□□ -0.11
RELA-201ENST00000308639 DNAL4O96015 105 aa14.36□□□□□ -0.11
RELA-201ENST00000308639 C9orf116Q5BN46 136 aaPredicted RBP14.35□□□□□ -0.11
RELA-201ENST00000308639 C14orf132Q9NPU4 83 aa14.34□□□□□ -0.11
RELA-201ENST00000308639 hADV29S1A0JD25 119 aa14.33□□□□□ -0.12
RELA-201ENST00000308639 ATRQ13535 2644 aa14.33□□□□□ -0.12
RELA-201ENST00000308639 A0A1B0GUV1 79 aa14.32□□□□□ -0.12
RELA-201ENST00000308639 ATOX1O00244 68 aa14.32□□□□□ -0.12
RELA-201ENST00000308639 NCR3O14931 201 aa14.3□□□□□ -0.12
RELA-201ENST00000308639 ANGP03950 147 aaKnown RBP14.3□□□□□ -0.12
RELA-201ENST00000308639 HIST1H4AP62805 103 aaKnown RBP14.3□□□□□ -0.12
RELA-201ENST00000308639 Q8IZM0 81 aa14.3□□□□□ -0.12
RELA-201ENST00000308639 CELA1Q9UNI1 258 aa14.3□□□□□ -0.12
RELA-201ENST00000308639 LY6G6DO95868 133 aa14.29□□□□□ -0.12
RELA-201ENST00000308639 CHCHD10Q8WYQ3 142 aaPredicted RBP14.29□□□□□ -0.12
RELA-201ENST00000308639 HTN3P15516 51 aa14.28□□□□□ -0.12
RELA-201ENST00000308639 IGHV4-28A0A0C4DH34 117 aa14.28□□□□□ -0.12
RELA-201ENST00000308639 KIAA0087Q14695 138 aa14.28□□□□□ -0.12
RELA-201ENST00000308639 CYSTM1Q9H1C7 97 aa14.28□□□□□ -0.12
RELA-201ENST00000308639 INAFM2P0DMQ5 153 aa14.28□□□□□ -0.12
RELA-201ENST00000308639 Q8NDZ9 215 aa14.28□□□□□ -0.12
RELA-201ENST00000308639 H0YGX0 51 aa14.27□□□□□ -0.12
RELA-201ENST00000308639 DPH3Q96FX2 82 aa14.27□□□□□ -0.12
RELA-201ENST00000308639 NSD1Q96L73 2696 aaPredicted RBP14.27□□□□□ -0.13
RELA-201ENST00000308639 NANOS2P60321 138 aaKnown RBP14.27□□□□□ -0.13
RELA-201ENST00000308639 HIVEP1P15822 2718 aa14.26□□□□□ -0.13
RELA-201ENST00000308639 REG3AQ06141 175 aa14.26□□□□□ -0.13
RELA-201ENST00000308639 TMEM258P61165 79 aa14.25□□□□□ -0.13
RELA-201ENST00000308639 INAFM1C9JVW0 142 aa14.24□□□□□ -0.13
RELA-201ENST00000308639 C6orf223Q8N319 242 aa14.24□□□□□ -0.13
RELA-201ENST00000308639 DAD1P61803 113 aa14.24□□□□□ -0.13
RELA-201ENST00000308639 CD164L2Q6UWJ8 174 aa14.24□□□□□ -0.13
RELA-201ENST00000308639 LYRM9A8MSI8 78 aa14.22□□□□□ -0.13
RELA-201ENST00000308639 RPL18AQ02543 176 aaKnown RBP14.22□□□□□ -0.13
RELA-201ENST00000308639 C10orf25Q5T742 122 aa14.22□□□□□ -0.13
RELA-201ENST00000308639 C9orf66Q5T8R8 295 aa14.2□□□□□ -0.14
RELA-201ENST00000308639 LINC00846Q9NV44 126 aa14.2□□□□□ -0.14
RELA-201ENST00000308639 TEP1Q99973 2627 aaKnown RBP14.2□□□□□ -0.14
RELA-201ENST00000308639 IGKV3D-7A0A0C4DH55 119 aa14.19□□□□□ -0.14
RELA-201ENST00000308639 OXTP01178 125 aa14.19□□□□□ -0.14
RELA-201ENST00000308639 C4orf26Q17RF5 130 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms