RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
KRT28-201ENST00000306658 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
KRT28-201ENST00000306658 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
KRT28-201ENST00000306658 SPANXDQ9BXN6 97 aa11.68□□□□□ -0.54
KRT28-201ENST00000306658 SPANXCQ9NY87 97 aa11.68□□□□□ -0.54
KRT28-201ENST00000306658 PLECQ15149 4684 aaKnown RBP11.68□□□□□ -0.54
KRT28-201ENST00000306658 A6NDN8 102 aa11.68□□□□□ -0.54
KRT28-201ENST00000306658 FXYD2P54710 66 aa11.68□□□□□ -0.54
KRT28-201ENST00000306658 TTC32Q5I0X7 151 aa11.68□□□□□ -0.54
KRT28-201ENST00000306658 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
KRT28-201ENST00000306658 C2orf82Q6UX34 121 aa11.67□□□□□ -0.54
KRT28-201ENST00000306658 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
KRT28-201ENST00000306658 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
KRT28-201ENST00000306658 A6NJY4 79 aa11.66□□□□□ -0.54
KRT28-201ENST00000306658 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
KRT28-201ENST00000306658 KRTAP1-5Q9BYS1 174 aa11.65□□□□□ -0.54
KRT28-201ENST00000306658 A0A0U1RRA0 63 aa11.65□□□□□ -0.55
KRT28-201ENST00000306658 SMIM13P0DJ93 91 aa11.65□□□□□ -0.55
KRT28-201ENST00000306658 MUSTN1Q8IVN3 82 aa11.65□□□□□ -0.55
KRT28-201ENST00000306658 NBDYA0A0U1RRE5 68 aa11.64□□□□□ -0.55
KRT28-201ENST00000306658 IFITM1P13164 125 aa11.64□□□□□ -0.55
KRT28-201ENST00000306658 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
KRT28-201ENST00000306658 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
KRT28-201ENST00000306658 COPS9Q8WXC6 57 aa11.64□□□□□ -0.55
KRT28-201ENST00000306658 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
KRT28-201ENST00000306658 LINC00158P58513 81 aa11.63□□□□□ -0.55
KRT28-201ENST00000306658 C6orf223Q8N319 242 aa11.63□□□□□ -0.55
KRT28-201ENST00000306658 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
KRT28-201ENST00000306658 LYSTQ99698 3801 aa11.63□□□□□ -0.55
KRT28-201ENST00000306658 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
KRT28-201ENST00000306658 DAND5Q8N907 189 aa11.62□□□□□ -0.55
KRT28-201ENST00000306658 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
KRT28-201ENST00000306658 PFN2P35080 140 aa11.62□□□□□ -0.55
KRT28-201ENST00000306658 COX17Q14061 63 aa11.62□□□□□ -0.55
KRT28-201ENST00000306658 NHP2Q9NX24 153 aaKnown RBP11.62□□□□□ -0.55
KRT28-201ENST00000306658 GVQW2A0A096LPI5 108 aaPredicted RBP11.61□□□□□ -0.55
KRT28-201ENST00000306658 F8WDY8 70 aa11.61□□□□□ -0.55
KRT28-201ENST00000306658 CASC10Q5T4H9 136 aa11.61□□□□□ -0.55
KRT28-201ENST00000306658 UNQ6190/PRO20217Q6UXQ8 127 aa11.61□□□□□ -0.55
KRT28-201ENST00000306658 C2orf48Q96LS8 159 aa11.61□□□□□ -0.55
KRT28-201ENST00000306658 C3orf84H3BNL1 204 aa11.6□□□□□ -0.55
KRT28-201ENST00000306658 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
KRT28-201ENST00000306658 NPC2P61916 151 aa11.59□□□□□ -0.55
KRT28-201ENST00000306658 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
KRT28-201ENST00000306658 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
KRT28-201ENST00000306658 A4D1N5 150 aa11.59□□□□□ -0.55
KRT28-201ENST00000306658 PSCAO43653 123 aa11.59□□□□□ -0.55
KRT28-201ENST00000306658 C10orf25Q5T742 122 aa11.59□□□□□ -0.55
KRT28-201ENST00000306658 DNAH1Q9P2D7 4330 aa11.58□□□□□ -0.56
KRT28-201ENST00000306658 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
KRT28-201ENST00000306658 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
KRT28-201ENST00000306658 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.57□□□□□ -0.56
KRT28-201ENST00000306658 TRBV30A0A0K0K1B3 111 aa11.57□□□□□ -0.56
KRT28-201ENST00000306658 A0A1B0GWB2 263 aa11.57□□□□□ -0.56
KRT28-201ENST00000306658 VPS13DQ5THJ4 4388 aa11.56□□□□□ -0.56
KRT28-201ENST00000306658 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
KRT28-201ENST00000306658 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
KRT28-201ENST00000306658 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
KRT28-201ENST00000306658 K7ERJ3 54 aa11.54□□□□□ -0.56
KRT28-201ENST00000306658 EIF4EBP3O60516 100 aaPredicted RBP11.54□□□□□ -0.56
KRT28-201ENST00000306658 CFC1BP0CG36 223 aa11.54□□□□□ -0.56
KRT28-201ENST00000306658 CFC1P0CG37 223 aa11.54□□□□□ -0.56
KRT28-201ENST00000306658 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
KRT28-201ENST00000306658 SOSTDC1Q6X4U4 206 aa11.54□□□□□ -0.56
KRT28-201ENST00000306658 RAB37Q96AX2 223 aa11.54□□□□□ -0.56
KRT28-201ENST00000306658 Q6ZRU5 148 aa11.53□□□□□ -0.56
KRT28-201ENST00000306658 M0R2N4 97 aa11.52□□□□□ -0.56
KRT28-201ENST00000306658 LY6G6CO95867 125 aa11.52□□□□□ -0.56
KRT28-201ENST00000306658 A0A0B4J2C4 111 aa11.52□□□□□ -0.57
KRT28-201ENST00000306658 LECT2O14960 151 aa11.52□□□□□ -0.57
KRT28-201ENST00000306658 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
KRT28-201ENST00000306658 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
KRT28-201ENST00000306658 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 A0A1B0GV90 55 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 C9orf118A6NHY6 69 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 Q6ZR54 194 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 CARD19Q96LW7 228 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 RNF151Q2KHN1 245 aa11.49□□□□□ -0.57
KRT28-201ENST00000306658 Q6ZRN7 208 aaPredicted RBP11.47□□□□□ -0.57
KRT28-201ENST00000306658 NDUFC2-KCTD14E9PQ53 114 aa11.46□□□□□ -0.57
KRT28-201ENST00000306658 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
KRT28-201ENST00000306658 H3BUT2 72 aa11.46□□□□□ -0.58
KRT28-201ENST00000306658 SLPIP03973 132 aa11.46□□□□□ -0.58
KRT28-201ENST00000306658 WFDC2Q14508 124 aa11.46□□□□□ -0.58
KRT28-201ENST00000306658 NDUFC2O95298 119 aa11.43□□□□□ -0.58
KRT28-201ENST00000306658 NAA38Q9BRA0 125 aaKnown RBP11.43□□□□□ -0.58
KRT28-201ENST00000306658 TRAV13-2A0A0B4J235 113 aa11.43□□□□□ -0.58
KRT28-201ENST00000306658 LRCOL1A6NCL2 159 aa11.43□□□□□ -0.58
KRT28-201ENST00000306658 TSPAN13O95857 204 aa11.43□□□□□ -0.58
KRT28-201ENST00000306658 TLX1NBP0CAT3 122 aa11.42□□□□□ -0.58
KRT28-201ENST00000306658 CNBPP62633 177 aaKnown RBP11.42□□□□□ -0.58
KRT28-201ENST00000306658 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
KRT28-201ENST00000306658 H7C2G1 150 aa11.41□□□□□ -0.58
KRT28-201ENST00000306658 Q1RN00 199 aa11.41□□□□□ -0.58
KRT28-201ENST00000306658 DNAH10Q8IVF4 4471 aa11.41□□□□□ -0.58
KRT28-201ENST00000306658 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.58
KRT28-201ENST00000306658 A0A1W2PPM0 123 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms