RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 Q8NAQ8 132 aa12.87□□□□□ -0.35
RNF139-201ENST00000303545 SND1-IT1Q9HBX3 110 aa12.87□□□□□ -0.35
RNF139-201ENST00000303545 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
RNF139-201ENST00000303545 ANGP03950 147 aaKnown RBP12.86□□□□□ -0.35
RNF139-201ENST00000303545 LINC00337Q8N6G1 96 aa12.86□□□□□ -0.35
RNF139-201ENST00000303545 OXLD1Q5BKU9 147 aa12.85□□□□□ -0.35
RNF139-201ENST00000303545 IGKV2-28A0A075B6P5 120 aa12.85□□□□□ -0.35
RNF139-201ENST00000303545 IGKV2D-28P01615 120 aa12.85□□□□□ -0.35
RNF139-201ENST00000303545 ANK2Q01484 3957 aa12.85□□□□□ -0.35
RNF139-201ENST00000303545 A0A1B0GUV1 79 aa12.84□□□□□ -0.35
RNF139-201ENST00000303545 CCL18P55774 89 aa12.84□□□□□ -0.35
RNF139-201ENST00000303545 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
RNF139-201ENST00000303545 UBE2WQ96B02 151 aa12.84□□□□□ -0.35
RNF139-201ENST00000303545 COX7A2LO14548 114 aa12.83□□□□□ -0.36
RNF139-201ENST00000303545 ATP5G1P05496 136 aa12.83□□□□□ -0.36
RNF139-201ENST00000303545 FAM218AQ96MZ4 157 aa12.83□□□□□ -0.36
RNF139-201ENST00000303545 RETNQ9HD89 108 aa12.83□□□□□ -0.36
RNF139-201ENST00000303545 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
RNF139-201ENST00000303545 STAB1Q9NY15 2570 aa12.82□□□□□ -0.36
RNF139-201ENST00000303545 M0QXV9 152 aa12.82□□□□□ -0.36
RNF139-201ENST00000303545 CRPP02741 224 aa12.82□□□□□ -0.36
RNF139-201ENST00000303545 CHCHD10Q8WYQ3 142 aaPredicted RBP12.8□□□□□ -0.36
RNF139-201ENST00000303545 MIFP14174 115 aa12.8□□□□□ -0.36
RNF139-201ENST00000303545 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
RNF139-201ENST00000303545 SPART-AS1P0CW21 52 aa12.79□□□□□ -0.36
RNF139-201ENST00000303545 REG3AQ06141 175 aa12.79□□□□□ -0.36
RNF139-201ENST00000303545 WFDC9Q8NEX5 89 aa12.79□□□□□ -0.36
RNF139-201ENST00000303545 Q9HAA7 133 aa12.79□□□□□ -0.36
RNF139-201ENST00000303545 TRAV8-4A0A0B4J246 113 aa12.78□□□□□ -0.36
RNF139-201ENST00000303545 H3BT86 120 aa12.78□□□□□ -0.36
RNF139-201ENST00000303545 C9orf116Q5BN46 136 aaPredicted RBP12.78□□□□□ -0.36
RNF139-201ENST00000303545 OR13C6PQ8NH95 151 aa12.78□□□□□ -0.36
RNF139-201ENST00000303545 TRAV13-2A0A0B4J235 113 aa12.77□□□□□ -0.36
RNF139-201ENST00000303545 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.36
RNF139-201ENST00000303545 PRR3P79522 188 aaKnown RBP12.77□□□□□ -0.37
RNF139-201ENST00000303545 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
RNF139-201ENST00000303545 ANAPC13Q9BS18 74 aa12.76□□□□□ -0.37
RNF139-201ENST00000303545 MALP21145 153 aa12.76□□□□□ -0.37
RNF139-201ENST00000303545 KRTAP10-11P60412 298 aa12.76□□□□□ -0.37
RNF139-201ENST00000303545 Q8IZM0 81 aa12.75□□□□□ -0.37
RNF139-201ENST00000303545 CD164L2Q6UWJ8 174 aa12.75□□□□□ -0.37
RNF139-201ENST00000303545 CMYA5Q8N3K9 4069 aa12.74□□□□□ -0.37
RNF139-201ENST00000303545 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
RNF139-201ENST00000303545 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
RNF139-201ENST00000303545 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
RNF139-201ENST00000303545 KLK12Q9UKR0 248 aa12.74□□□□□ -0.37
RNF139-201ENST00000303545 A0A087WYN8 130 aa12.73□□□□□ -0.37
RNF139-201ENST00000303545 KIAA0087Q14695 138 aa12.73□□□□□ -0.37
RNF139-201ENST00000303545 CFAP161Q6P656 301 aa12.73□□□□□ -0.37
RNF139-201ENST00000303545 C6orf223Q8N319 242 aa12.73□□□□□ -0.37
RNF139-201ENST00000303545 RPL28P46779 137 aaKnown RBP12.72□□□□□ -0.37
RNF139-201ENST00000303545 MAST4O15021 2626 aa12.72□□□□□ -0.37
RNF139-201ENST00000303545 BAALC-AS2P0C853 105 aa12.72□□□□□ -0.37
RNF139-201ENST00000303545 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
RNF139-201ENST00000303545 NHLRC4P0CG21 123 aaPredicted RBP12.69□□□□□ -0.38
RNF139-201ENST00000303545 KRTAP24-1Q3LI83 254 aa12.69□□□□□ -0.38
RNF139-201ENST00000303545 LELP1Q5T871 98 aa12.69□□□□□ -0.38
RNF139-201ENST00000303545 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
RNF139-201ENST00000303545 C10orf25Q5T742 122 aa12.68□□□□□ -0.38
RNF139-201ENST00000303545 TRACP01848 142 aa12.68□□□□□ -0.38
RNF139-201ENST00000303545 PPDPFQ9H3Y8 114 aa12.68□□□□□ -0.38
RNF139-201ENST00000303545 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
RNF139-201ENST00000303545 WIPF1O43516 503 aa12.67□□□□□ -0.38
RNF139-201ENST00000303545 C22orf24Q9Y442 160 aa12.67□□□□□ -0.38
RNF139-201ENST00000303545 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
RNF139-201ENST00000303545 UNQ6190/PRO20217Q6UXQ8 127 aa12.66□□□□□ -0.38
RNF139-201ENST00000303545 B5MCH6 92 aa12.66□□□□□ -0.38
RNF139-201ENST00000303545 SLPIP03973 132 aa12.66□□□□□ -0.38
RNF139-201ENST00000303545 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
RNF139-201ENST00000303545 SNCGO76070 127 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 GAGE2EQ4V326 116 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 Q6ZTC4 211 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 GAGE2DQ9UEU5 116 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 ENHOQ6UWT2 76 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 Q8NDZ9 215 aa12.65□□□□□ -0.38
RNF139-201ENST00000303545 LECT2O14960 151 aa12.64□□□□□ -0.39
RNF139-201ENST00000303545 NDUFV3P56181 108 aaKnown RBP12.64□□□□□ -0.39
RNF139-201ENST00000303545 NCR3O14931 201 aa12.63□□□□□ -0.39
RNF139-201ENST00000303545 SPAG11BQ08648 103 aa12.63□□□□□ -0.39
RNF139-201ENST00000303545 WFDC10BQ8IUB3 73 aa12.63□□□□□ -0.39
RNF139-201ENST00000303545 C9orf129Q5T035 196 aaKnown RBP12.63□□□□□ -0.39
RNF139-201ENST00000303545 C3orf56Q8N813 242 aa12.63□□□□□ -0.39
RNF139-201ENST00000303545 DNAL4O96015 105 aa12.62□□□□□ -0.39
RNF139-201ENST00000303545 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
RNF139-201ENST00000303545 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
RNF139-201ENST00000303545 LINC01561Q8N1V8 128 aa12.62□□□□□ -0.39
RNF139-201ENST00000303545 CYSRT1A8MQ03 144 aa12.6□□□□□ -0.39
RNF139-201ENST00000303545 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
RNF139-201ENST00000303545 NANOS2P60321 138 aaKnown RBP12.59□□□□□ -0.39
RNF139-201ENST00000303545 A0A0J9YWU9 116 aa12.58□□□□□ -0.4
RNF139-201ENST00000303545 CCDC179H3BU77 68 aa12.58□□□□□ -0.4
RNF139-201ENST00000303545 CXCL5P42830 114 aa12.58□□□□□ -0.4
RNF139-201ENST00000303545 PRR34Q9NV39 138 aa12.58□□□□□ -0.4
RNF139-201ENST00000303545 COL6A5A8TX70 2615 aa12.57□□□□□ -0.4
RNF139-201ENST00000303545 H0YGX0 51 aa12.57□□□□□ -0.4
RNF139-201ENST00000303545 HIGD2BQ4VC39 106 aa12.57□□□□□ -0.4
RNF139-201ENST00000303545 KLK5Q9Y337 293 aaPredicted RBP12.57□□□□□ -0.4
RNF139-201ENST00000303545 COX17Q14061 63 aa12.56□□□□□ -0.4
RNF139-201ENST00000303545 GAGE2AQ6NT46 116 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms