RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CSPG4Q6UVK1 2322 aa7.47□□□□□ -1.21
CLIP1-201ENST00000302528 BRI3O95415 125 aa7.46□□□□□ -1.21
CLIP1-201ENST00000302528 MED12LQ86YW9 2145 aa7.46□□□□□ -1.22
CLIP1-201ENST00000302528 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
CLIP1-201ENST00000302528 VPREB1P12018 145 aa7.45□□□□□ -1.22
CLIP1-201ENST00000302528 Q8N6K4 173 aa7.45□□□□□ -1.22
CLIP1-201ENST00000302528 EIF4EBP1Q13541 118 aaPredicted RBP7.45□□□□□ -1.22
CLIP1-201ENST00000302528 OTOGLQ3ZCN5 2332 aa7.45□□□□□ -1.22
CLIP1-201ENST00000302528 ACACBO00763 2458 aa7.45□□□□□ -1.22
CLIP1-201ENST00000302528 Q6ZTC4 211 aa7.45□□□□□ -1.22
CLIP1-201ENST00000302528 IGLV1-40P01703 118 aa7.44□□□□□ -1.22
CLIP1-201ENST00000302528 F8WDY8 70 aa7.44□□□□□ -1.22
CLIP1-201ENST00000302528 C11orf71Q6IPW1 123 aa7.44□□□□□ -1.22
CLIP1-201ENST00000302528 C10orf142B7Z368 130 aa7.44□□□□□ -1.22
CLIP1-201ENST00000302528 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
CLIP1-201ENST00000302528 ACYP2P14621 99 aa7.43□□□□□ -1.22
CLIP1-201ENST00000302528 EML5Q05BV3 1969 aa7.43□□□□□ -1.22
CLIP1-201ENST00000302528 DNAH12Q6ZR08 3092 aa7.42□□□□□ -1.22
CLIP1-201ENST00000302528 Q8N2B8 174 aa7.42□□□□□ -1.22
CLIP1-201ENST00000302528 ZFHX2Q9C0A1 2572 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-201ENST00000302528 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
CLIP1-201ENST00000302528 ODF3L2Q3SX64 289 aa7.42□□□□□ -1.22
CLIP1-201ENST00000302528 PTPRSQ13332 1948 aa7.41□□□□□ -1.22
CLIP1-201ENST00000302528 MUC4Q99102 2169 aa7.41□□□□□ -1.22
CLIP1-201ENST00000302528 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
CLIP1-201ENST00000302528 PTPN13Q12923 2485 aa7.41□□□□□ -1.22
CLIP1-201ENST00000302528 ATP11AUNQ6ZP68 121 aa7.41□□□□□ -1.22
CLIP1-201ENST00000302528 ADAMTSL4-AS1Q5T5F5 129 aa7.4□□□□□ -1.22
CLIP1-201ENST00000302528 MYO18BQ8IUG5 2567 aa7.4□□□□□ -1.22
CLIP1-201ENST00000302528 CXCL6P80162 114 aa7.4□□□□□ -1.22
CLIP1-201ENST00000302528 FHL2Q14192 279 aa7.4□□□□□ -1.22
CLIP1-201ENST00000302528 SMIM29Q86T20 159 aa7.4□□□□□ -1.22
CLIP1-201ENST00000302528 LRP4O75096 1905 aa7.4□□□□□ -1.23
CLIP1-201ENST00000302528 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.23
CLIP1-201ENST00000302528 LINC00846Q9NV44 126 aa7.4□□□□□ -1.23
CLIP1-201ENST00000302528 A8MTW9 85 aa7.39□□□□□ -1.23
CLIP1-201ENST00000302528 PRO0628Q9UI54 55 aa7.39□□□□□ -1.23
CLIP1-201ENST00000302528 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
CLIP1-201ENST00000302528 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
CLIP1-201ENST00000302528 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
CLIP1-201ENST00000302528 MUC6Q6W4X9 2439 aa7.38□□□□□ -1.23
CLIP1-201ENST00000302528 C8orf87E5RJ46 101 aa7.38□□□□□ -1.23
CLIP1-201ENST00000302528 PLXNB1O43157 2135 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 Q6ZRU5 148 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 ATG2AQ2TAZ0 1938 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 EDN2P20800 178 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 IGLV8-61A0A075B6I0 122 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 IGLV1-51P01701 117 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 HIVEP3Q5T1R4 2406 aa7.37□□□□□ -1.23
CLIP1-201ENST00000302528 CPAMD8Q8IZJ3 1885 aa7.36□□□□□ -1.23
CLIP1-201ENST00000302528 LYPD5Q6UWN5 251 aa7.36□□□□□ -1.23
CLIP1-201ENST00000302528 SMR3AQ99954 134 aa7.36□□□□□ -1.23
CLIP1-201ENST00000302528 ZNF580Q9UK33 172 aa7.36□□□□□ -1.23
CLIP1-201ENST00000302528 ANKHD1Q8IWZ3 2542 aaKnown RBP7.36□□□□□ -1.23
CLIP1-201ENST00000302528 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
CLIP1-201ENST00000302528 CCDC168Q8NDH2 2452 aa7.35□□□□□ -1.23
CLIP1-201ENST00000302528 UTRNP46939 3433 aa7.35□□□□□ -1.23
CLIP1-201ENST00000302528 MOBPQ13875 183 aa7.35□□□□□ -1.23
CLIP1-201ENST00000302528 AMELXQ99217 191 aa7.35□□□□□ -1.23
CLIP1-201ENST00000302528 BDP1A6H8Y1 2624 aa7.35□□□□□ -1.23
CLIP1-201ENST00000302528 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
CLIP1-201ENST00000302528 A0A1B0GUV1 79 aa7.34□□□□□ -1.23
CLIP1-201ENST00000302528 CEP350Q5VT06 3117 aa7.34□□□□□ -1.23
CLIP1-201ENST00000302528 C2CD3Q4AC94 2353 aa7.34□□□□□ -1.23
CLIP1-201ENST00000302528 SSBP3-AS1Q7Z2R9 100 aa7.34□□□□□ -1.23
CLIP1-201ENST00000302528 PRO3102Q9H379 93 aa7.34□□□□□ -1.23
CLIP1-201ENST00000302528 PCNTO95613 3336 aa7.33□□□□□ -1.24
CLIP1-201ENST00000302528 DSCAMO60469 2012 aa7.33□□□□□ -1.24
CLIP1-201ENST00000302528 BPTFQ12830 3046 aa7.32□□□□□ -1.24
CLIP1-201ENST00000302528 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
CLIP1-201ENST00000302528 ARHGAP32A7KAX9 2087 aa7.32□□□□□ -1.24
CLIP1-201ENST00000302528 CUL9Q8IWT3 2517 aa7.31□□□□□ -1.24
CLIP1-201ENST00000302528 AVPP01185 164 aa7.31□□□□□ -1.24
CLIP1-201ENST00000302528 TECTAO75443 2155 aa7.31□□□□□ -1.24
CLIP1-201ENST00000302528 CEP192Q8TEP8 1941 aa7.31□□□□□ -1.24
CLIP1-201ENST00000302528 COL5A1P20908 1838 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-201ENST00000302528 SPATA3Q8NHX4 192 aa7.31□□□□□ -1.24
CLIP1-201ENST00000302528 URB1-AS1Q96HZ7 61 aa7.3□□□□□ -1.24
CLIP1-201ENST00000302528 TANC2Q9HCD6 1990 aa7.3□□□□□ -1.24
CLIP1-201ENST00000302528 Q6ZSN1 163 aa7.29□□□□□ -1.24
CLIP1-201ENST00000302528 HCFC1P51610 2035 aa7.29□□□□□ -1.24
CLIP1-201ENST00000302528 LINC00313P59037 77 aa7.29□□□□□ -1.24
CLIP1-201ENST00000302528 KIAA1549Q9HCM3 1950 aa7.29□□□□□ -1.24
CLIP1-201ENST00000302528 FAM229AH3BQW9 127 aa7.28□□□□□ -1.24
CLIP1-201ENST00000302528 NHLRC4P0CG21 123 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-201ENST00000302528 LINC00310P59036 64 aa7.28□□□□□ -1.24
CLIP1-201ENST00000302528 NAV3Q8IVL0 2385 aa7.28□□□□□ -1.24
CLIP1-201ENST00000302528 WDR87Q6ZQQ6 2873 aa7.27□□□□□ -1.25
CLIP1-201ENST00000302528 CENPFP49454 3210 aa7.27□□□□□ -1.25
CLIP1-201ENST00000302528 H3BPC8 53 aa7.27□□□□□ -1.25
CLIP1-201ENST00000302528 LINC00167Q96N53 147 aa7.27□□□□□ -1.25
CLIP1-201ENST00000302528 MDFIQ99750 246 aa7.26□□□□□ -1.25
CLIP1-201ENST00000302528 ABCA2Q9BZC7 2435 aa7.26□□□□□ -1.25
CLIP1-201ENST00000302528 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
CLIP1-201ENST00000302528 EXPH5Q8NEV8 1989 aa7.26□□□□□ -1.25
CLIP1-201ENST00000302528 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
CLIP1-201ENST00000302528 TYMSOSQ8TAI1 123 aa7.25□□□□□ -1.25
CLIP1-201ENST00000302528 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
CLIP1-201ENST00000302528 C16orf95Q9H693 158 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms