RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 HILS1P60008 231 aa8.71□□□□□ -1.02
PDGFD-201ENST00000302251 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
PDGFD-201ENST00000302251 DEFB135Q30KP9 77 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 C4orf3Q8WVX3 66 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 FAM19A4Q96LR4 140 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
PDGFD-201ENST00000302251 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
PDGFD-201ENST00000302251 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
PDGFD-201ENST00000302251 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
PDGFD-201ENST00000302251 A8MTW9 85 aa8.69□□□□□ -1.02
PDGFD-201ENST00000302251 NREPQ16612 68 aa8.69□□□□□ -1.02
PDGFD-201ENST00000302251 FASNP49327 2511 aaKnown RBP8.68□□□□□ -1.02
PDGFD-201ENST00000302251 CHD6Q8TD26 2715 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
PDGFD-201ENST00000302251 CAMK2N2Q96S95 79 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 ZNF702PQ9H963 129 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 CELSR2Q9HCU4 2923 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 CRYBG3Q68DQ2 2970 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 TMEM258P61165 79 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 Q6ZQY7 126 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.68□□□□□ -1.02
PDGFD-201ENST00000302251 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
PDGFD-201ENST00000302251 CHCHD10Q8WYQ3 142 aaPredicted RBP8.68□□□□□ -1.02
PDGFD-201ENST00000302251 NBPF19A0A087WUL8 3843 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 Q6YL49 198 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 LITAFQ99732 161 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 KIR2DL5BQ8NHK3 375 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 ITPR1Q14643 2758 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 USP24Q9UPU5 2620 aa8.67□□□□□ -1.02
PDGFD-201ENST00000302251 FAM222AQ5U5X8 452 aa8.66□□□□□ -1.02
PDGFD-201ENST00000302251 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
PDGFD-201ENST00000302251 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
PDGFD-201ENST00000302251 REG3AQ06141 175 aa8.66□□□□□ -1.02
PDGFD-201ENST00000302251 BBC3Q96PG8 261 aaPredicted RBP8.65□□□□□ -1.02
PDGFD-201ENST00000302251 SMCR5Q8TEV8 140 aa8.65□□□□□ -1.03
PDGFD-201ENST00000302251 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
PDGFD-201ENST00000302251 Q6JHZ5 121 aa8.64□□□□□ -1.03
PDGFD-201ENST00000302251 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
PDGFD-201ENST00000302251 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
PDGFD-201ENST00000302251 CUBNO60494 3623 aa8.64□□□□□ -1.03
PDGFD-201ENST00000302251 TRBV6-4A0A1B0GX49 114 aa8.64□□□□□ -1.03
PDGFD-201ENST00000302251 LINC00482Q8N8I6 264 aa8.63□□□□□ -1.03
PDGFD-201ENST00000302251 DEFB113Q30KQ7 82 aa8.63□□□□□ -1.03
PDGFD-201ENST00000302251 ZNF469Q96JG9 3925 aaPredicted RBP8.63□□□□□ -1.03
PDGFD-201ENST00000302251 CCKP06307 115 aa8.62□□□□□ -1.03
PDGFD-201ENST00000302251 FLNCQ14315 2725 aa8.62□□□□□ -1.03
PDGFD-201ENST00000302251 DNAJC9-AS1A6NH13 148 aa8.62□□□□□ -1.03
PDGFD-201ENST00000302251 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
PDGFD-201ENST00000302251 IGHV4-31P0DP07 118 aa8.61□□□□□ -1.03
PDGFD-201ENST00000302251 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
PDGFD-201ENST00000302251 F8WEM9 126 aa8.6□□□□□ -1.03
PDGFD-201ENST00000302251 Q8N814 137 aa8.6□□□□□ -1.03
PDGFD-201ENST00000302251 COX7BP24311 80 aa8.6□□□□□ -1.03
PDGFD-201ENST00000302251 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
PDGFD-201ENST00000302251 NDUFC2O95298 119 aa8.59□□□□□ -1.03
PDGFD-201ENST00000302251 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
PDGFD-201ENST00000302251 PRR4Q16378 134 aa8.59□□□□□ -1.03
PDGFD-201ENST00000302251 NBEAL2Q6ZNJ1 2754 aa8.59□□□□□ -1.03
PDGFD-201ENST00000302251 LRCOL1A6NCL2 159 aa8.59□□□□□ -1.04
PDGFD-201ENST00000302251 BEAN1Q3B7T3 259 aa8.59□□□□□ -1.04
PDGFD-201ENST00000302251 A0A087WZ39 114 aa8.58□□□□□ -1.04
PDGFD-201ENST00000302251 C4orf26Q17RF5 130 aa8.58□□□□□ -1.04
PDGFD-201ENST00000302251 BPY2O14599 106 aa8.58□□□□□ -1.04
PDGFD-201ENST00000302251 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDGFD-201ENST00000302251 ATP5EP2Q5VTU8 51 aa8.58□□□□□ -1.04
PDGFD-201ENST00000302251 UBE2BP63146 152 aa8.57□□□□□ -1.04
PDGFD-201ENST00000302251 FLNAP21333 2647 aaKnown RBP8.57□□□□□ -1.04
PDGFD-201ENST00000302251 APOC4P55056 127 aa8.56□□□□□ -1.04
PDGFD-201ENST00000302251 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
PDGFD-201ENST00000302251 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
PDGFD-201ENST00000302251 PRORYQ9H606 182 aa8.56□□□□□ -1.04
PDGFD-201ENST00000302251 RMI2Q96E14 147 aa8.55□□□□□ -1.04
PDGFD-201ENST00000302251 ZANQ9Y493 2812 aa8.55□□□□□ -1.04
PDGFD-201ENST00000302251 KRTAP10-9P60411 292 aa8.55□□□□□ -1.04
PDGFD-201ENST00000302251 CD164L2Q6UWJ8 174 aa8.55□□□□□ -1.04
PDGFD-201ENST00000302251 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
PDGFD-201ENST00000302251 Q8N3U1 123 aa8.55□□□□□ -1.04
PDGFD-201ENST00000302251 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 GCN1Q92616 2671 aaKnown RBP8.54□□□□□ -1.04
PDGFD-201ENST00000302251 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 CYSRT1A8MQ03 144 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 CRYGAP11844 174 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 LINC01006Q8NI28 216 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 BRI3O95415 125 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 PDE6GP18545 87 aa8.54□□□□□ -1.04
PDGFD-201ENST00000302251 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
PDGFD-201ENST00000302251 Q8IZM0 81 aa8.53□□□□□ -1.04
PDGFD-201ENST00000302251 FHL2Q14192 279 aa8.53□□□□□ -1.04
PDGFD-201ENST00000302251 C9orf129Q5T035 196 aaKnown RBP8.53□□□□□ -1.04
PDGFD-201ENST00000302251 HECTD1Q9ULT8 2610 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms