RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 C15orf53Q8NAA6 179 aa15.06■□□□□ 0
SMAD1-201ENST00000302085 UBE2WQ96B02 151 aa15.06■□□□□ 0
SMAD1-201ENST00000302085 SPCS1Q9Y6A9 102 aa15.06■□□□□ 0
SMAD1-201ENST00000302085 KIAA0087Q14695 138 aa15.05■□□□□ -0
SMAD1-201ENST00000302085 SOSTDC1Q6X4U4 206 aa15.05■□□□□ -0
SMAD1-201ENST00000302085 MALP21145 153 aa15.04■□□□□ -0
SMAD1-201ENST00000302085 GTF2H5Q6ZYL4 71 aa15.04■□□□□ -0
SMAD1-201ENST00000302085 CRPP02741 224 aa15.03■□□□□ -0
SMAD1-201ENST00000302085 C2orf82Q6UX34 121 aa15.02■□□□□ -0
SMAD1-201ENST00000302085 TRAV8-4A0A0B4J246 113 aa15.02□□□□□ -0.01
SMAD1-201ENST00000302085 LINC01556Q5JQF7 62 aa15.02□□□□□ -0.01
SMAD1-201ENST00000302085 SFTA2Q6UW10 78 aa15.02□□□□□ -0.01
SMAD1-201ENST00000302085 IBA57-AS1B1ANH7 110 aa15□□□□□ -0.01
SMAD1-201ENST00000302085 KLK5Q9Y337 293 aaPredicted RBP15□□□□□ -0.01
SMAD1-201ENST00000302085 LINC00588Q9Y4M8 146 aa15□□□□□ -0.01
SMAD1-201ENST00000302085 LINC00158P58513 81 aa14.99□□□□□ -0.01
SMAD1-201ENST00000302085 MIR7-3HGQ8N6C7 128 aa14.99□□□□□ -0.01
SMAD1-201ENST00000302085 COPS9Q8WXC6 57 aa14.98□□□□□ -0.01
SMAD1-201ENST00000302085 ERG28Q9UKR5 140 aa14.98□□□□□ -0.01
SMAD1-201ENST00000302085 CKS1BP61024 79 aa14.98□□□□□ -0.01
SMAD1-201ENST00000302085 KRTAP26-1Q6PEX3 210 aa14.98□□□□□ -0.01
SMAD1-201ENST00000302085 PFN2P35080 140 aa14.97□□□□□ -0.01
SMAD1-201ENST00000302085 CFAP161Q6P656 301 aa14.97□□□□□ -0.01
SMAD1-201ENST00000302085 H7C2G1 150 aa14.96□□□□□ -0.01
SMAD1-201ENST00000302085 DNAH10OSP0CZ25 163 aa14.96□□□□□ -0.01
SMAD1-201ENST00000302085 PPDPFQ9H3Y8 114 aa14.96□□□□□ -0.01
SMAD1-201ENST00000302085 LOC107984156A0A0G2JMH3 177 aa14.95□□□□□ -0.02
SMAD1-201ENST00000302085 ARL17AQ8IVW1 177 aa14.95□□□□□ -0.02
SMAD1-201ENST00000302085 CXCL5P42830 114 aa14.94□□□□□ -0.02
SMAD1-201ENST00000302085 CCL18P55774 89 aa14.93□□□□□ -0.02
SMAD1-201ENST00000302085 C6orf223Q8N319 242 aa14.93□□□□□ -0.02
SMAD1-201ENST00000302085 SPAG11BQ08648 103 aa14.93□□□□□ -0.02
SMAD1-201ENST00000302085 LINC00526Q96FQ7 95 aa14.91□□□□□ -0.02
SMAD1-201ENST00000302085 DNAH9Q9NYC9 4486 aa14.91□□□□□ -0.02
SMAD1-201ENST00000302085 COL7A1Q02388 2944 aa14.91□□□□□ -0.02
SMAD1-201ENST00000302085 STAB2Q8WWQ8 2551 aa14.9□□□□□ -0.02
SMAD1-201ENST00000302085 Q1RN00 199 aa14.9□□□□□ -0.02
SMAD1-201ENST00000302085 H3BMG7 143 aa14.89□□□□□ -0.03
SMAD1-201ENST00000302085 NHLRC4P0CG21 123 aaPredicted RBP14.89□□□□□ -0.03
SMAD1-201ENST00000302085 C10orf25Q5T742 122 aa14.89□□□□□ -0.03
SMAD1-201ENST00000302085 UNQ6190/PRO20217Q6UXQ8 127 aa14.89□□□□□ -0.03
SMAD1-201ENST00000302085 RPL13AP40429 203 aaKnown RBP14.89□□□□□ -0.03
SMAD1-201ENST00000302085 PSMB2P49721 201 aa14.89□□□□□ -0.03
SMAD1-201ENST00000302085 C9orf116Q5BN46 136 aaPredicted RBP14.88□□□□□ -0.03
SMAD1-201ENST00000302085 SCGB1C2P0DMR2 95 aa14.87□□□□□ -0.03
SMAD1-201ENST00000302085 C1orf43Q9BWL3 253 aa14.87□□□□□ -0.03
SMAD1-201ENST00000302085 SND1-IT1Q9HBX3 110 aa14.87□□□□□ -0.03
SMAD1-201ENST00000302085 COX17Q14061 63 aa14.86□□□□□ -0.03
SMAD1-201ENST00000302085 LYRM7Q5U5X0 104 aa14.86□□□□□ -0.03
SMAD1-201ENST00000302085 NTN5Q8WTR8 489 aaPredicted RBP14.86□□□□□ -0.03
SMAD1-201ENST00000302085 UPK3BQ9BT76 320 aa14.86□□□□□ -0.03
SMAD1-201ENST00000302085 IGKV2D-24A0A075B6R9 120 aa14.85□□□□□ -0.03
SMAD1-201ENST00000302085 TRBV30A0A0K0K1B3 111 aa14.85□□□□□ -0.03
SMAD1-201ENST00000302085 TCL1BO95988 128 aa14.85□□□□□ -0.03
SMAD1-201ENST00000302085 TRIAP1O43715 76 aa14.85□□□□□ -0.03
SMAD1-201ENST00000302085 Q9HAA7 133 aa14.84□□□□□ -0.03
SMAD1-201ENST00000302085 IGKV2-28A0A075B6P5 120 aa14.84□□□□□ -0.03
SMAD1-201ENST00000302085 IGKV2D-28P01615 120 aa14.84□□□□□ -0.03
SMAD1-201ENST00000302085 C15orf56Q8N910 161 aa14.83□□□□□ -0.04
SMAD1-201ENST00000302085 APLNQ9ULZ1 77 aa14.83□□□□□ -0.04
SMAD1-201ENST00000302085 HIGD2BQ4VC39 106 aa14.82□□□□□ -0.04
SMAD1-201ENST00000302085 TRBV20-1A0A075B6N2 111 aa14.82□□□□□ -0.04
SMAD1-201ENST00000302085 PRO0461Q9UI25 63 aa14.81□□□□□ -0.04
SMAD1-201ENST00000302085 LINC00337Q8N6G1 96 aa14.8□□□□□ -0.04
SMAD1-201ENST00000302085 GVQW2A0A096LPI5 108 aaPredicted RBP14.79□□□□□ -0.04
SMAD1-201ENST00000302085 ZNF561-AS1K7EIQ3 104 aa14.79□□□□□ -0.04
SMAD1-201ENST00000302085 C6orf48Q9UBA6 75 aa14.79□□□□□ -0.04
SMAD1-201ENST00000302085 TRAV13-2A0A0B4J235 113 aa14.78□□□□□ -0.04
SMAD1-201ENST00000302085 F8W1H4 67 aa14.78□□□□□ -0.04
SMAD1-201ENST00000302085 MTURNQ8N3F0 131 aa14.78□□□□□ -0.04
SMAD1-201ENST00000302085 WFDC2Q14508 124 aa14.77□□□□□ -0.04
SMAD1-201ENST00000302085 KRTAP21-3Q3LHN1 58 aa14.76□□□□□ -0.05
SMAD1-201ENST00000302085 CAMK2N2Q96S95 79 aa14.75□□□□□ -0.05
SMAD1-201ENST00000302085 COX6CP09669 75 aa14.74□□□□□ -0.05
SMAD1-201ENST00000302085 C2orf48Q96LS8 159 aa14.74□□□□□ -0.05
SMAD1-201ENST00000302085 DNHD1Q96M86 4753 aa14.73□□□□□ -0.05
SMAD1-201ENST00000302085 CASC10Q5T4H9 136 aa14.73□□□□□ -0.05
SMAD1-201ENST00000302085 MUC7Q8TAX7 377 aa14.73□□□□□ -0.05
SMAD1-201ENST00000302085 SMCPP49901 116 aaPredicted RBP14.72□□□□□ -0.05
SMAD1-201ENST00000302085 PRR3P79522 188 aaKnown RBP14.72□□□□□ -0.05
SMAD1-201ENST00000302085 ATXN8Q156A1 80 aa14.72□□□□□ -0.05
SMAD1-201ENST00000302085 Q6ZRU5 148 aa14.72□□□□□ -0.05
SMAD1-201ENST00000302085 CLEC2BQ92478 149 aa14.71□□□□□ -0.05
SMAD1-201ENST00000302085 Q8NDZ9 215 aa14.71□□□□□ -0.06
SMAD1-201ENST00000302085 NUPR2A6NF83 97 aa14.7□□□□□ -0.06
SMAD1-201ENST00000302085 NDUFC2O95298 119 aa14.7□□□□□ -0.06
SMAD1-201ENST00000302085 RMI2Q96E14 147 aa14.7□□□□□ -0.06
SMAD1-201ENST00000302085 UBE2DNLQ8IWF7 75 aa14.69□□□□□ -0.06
SMAD1-201ENST00000302085 RPL28P46779 137 aaKnown RBP14.69□□□□□ -0.06
SMAD1-201ENST00000302085 KRTAP1-5Q9BYS1 174 aa14.69□□□□□ -0.06
SMAD1-201ENST00000302085 MEGF8Q7Z7M0 2845 aa14.68□□□□□ -0.06
SMAD1-201ENST00000302085 F8WDY8 70 aa14.67□□□□□ -0.06
SMAD1-201ENST00000302085 OCIAD2Q56VL3 154 aa14.67□□□□□ -0.06
SMAD1-201ENST00000302085 SMIM11BQ8TCY0 68 aa14.67□□□□□ -0.06
SMAD1-201ENST00000302085 LINC01620Q4KN68 170 aa14.67□□□□□ -0.06
SMAD1-201ENST00000302085 OR13C6PQ8NH95 151 aa14.67□□□□□ -0.06
SMAD1-201ENST00000302085 USP17L23D6RBM5 183 aa14.65□□□□□ -0.06
SMAD1-201ENST00000302085 LST1O00453 97 aa14.65□□□□□ -0.06
SMAD1-201ENST00000302085 C9JAW5 83 aa14.65□□□□□ -0.06
SMAD1-201ENST00000302085 SYCNQ0VAF6 134 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms