RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 LMO4P61968 165 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 ZNF702PQ9H963 129 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 C7orf65Q6ZTY9 151 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 KPRPQ5T749 579 aaPredicted RBP4.06□□□□□ -1.76
CPSF2-201ENST00000298875 CHCHD7Q9BUK0 85 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 GAS8-AS1O95177 125 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 SOSTDC1Q6X4U4 206 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 CDIP1Q9H305 208 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 LELP1Q5T871 98 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 LINC00337Q8N6G1 96 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 PCNX3Q9H6A9 2034 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 PRR3P79522 188 aaKnown RBP4.05□□□□□ -1.76
CPSF2-201ENST00000298875 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 PTPRBP23467 1997 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 Q8IZM0 81 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 LINC01546A6NGU7 62 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 MUC22E2RYF6 1773 aaPredicted RBP4.05□□□□□ -1.76
CPSF2-201ENST00000298875 A0A087WVE0 104 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
CPSF2-201ENST00000298875 Q6ZSV7 163 aa4.05□□□□□ -1.76
CPSF2-201ENST00000298875 PTPRSQ13332 1948 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 Q8N814 137 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 C11orf21Q9P2W6 132 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 SPAG11AQ6PDA7 123 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 LY6G6CO95867 125 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 Q8N3U1 123 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 Q8NA96 180 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 COX6A2Q02221 97 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 EGFEM1PQ0D2K5 195 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 EP400Q96L91 3159 aa4.04□□□□□ -1.76
CPSF2-201ENST00000298875 C1orf137Q5JT78 98 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 SPINK1P00995 79 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 SPTBN4Q9H254 2564 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
CPSF2-201ENST00000298875 MUC6Q6W4X9 2439 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 LINC01547P58512 204 aaPredicted RBP4.03□□□□□ -1.76
CPSF2-201ENST00000298875 CYSRT1A8MQ03 144 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 LY6G6DO95868 133 aa4.03□□□□□ -1.76
CPSF2-201ENST00000298875 CRIP2P52943 208 aaPredicted RBP4.03□□□□□ -1.76
CPSF2-201ENST00000298875 COX8CQ7Z4L0 72 aa4.03□□□□□ -1.77
CPSF2-201ENST00000298875 C11orf71Q6IPW1 123 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 PSMG3-AS1Q96PY0 264 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 KLLNB2CW77 178 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 H0Y9P7 68 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
CPSF2-201ENST00000298875 DEFB116Q30KQ4 102 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 UNQ6190/PRO20217Q6UXQ8 127 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 LINC00575Q6W349 94 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 ZFYVE26Q68DK2 2539 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 SMIM1B2RUZ4 78 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 EIF4EBP3O60516 100 aaPredicted RBP4.01□□□□□ -1.77
CPSF2-201ENST00000298875 LRP4O75096 1905 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 USP9XQ93008 2570 aaPredicted RBP4.01□□□□□ -1.77
CPSF2-201ENST00000298875 SBSPONQ8IVN8 264 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 ZNF580Q9UK33 172 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 EDN2P20800 178 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 Q9BRP9 147 aa4.01□□□□□ -1.77
CPSF2-201ENST00000298875 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
CPSF2-201ENST00000298875 PCOTHQ58A44 107 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 MUC4Q99102 2169 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 IGLV1-40P01703 118 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 IGIPA6NJ69 53 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 TSPEAR-AS2P59090 65 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 ADAMTSL4-AS1Q5T5F5 129 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 LINC00310P59036 64 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 LINC01006Q8NI28 216 aa4□□□□□ -1.77
CPSF2-201ENST00000298875 ABCA12Q86UK0 2595 aa3.99□□□□□ -1.77
CPSF2-201ENST00000298875 C10orf142B7Z368 130 aa3.99□□□□□ -1.77
CPSF2-201ENST00000298875 KLKP1Q107X0 134 aa3.99□□□□□ -1.77
CPSF2-201ENST00000298875 LCA10Q71F78 164 aa3.99□□□□□ -1.77
CPSF2-201ENST00000298875 PLA2G1BP04054 148 aaKnown RBP3.99□□□□□ -1.77
CPSF2-201ENST00000298875 TET2Q6N021 2002 aaPredicted RBP3.99□□□□□ -1.77
CPSF2-201ENST00000298875 POLQO75417 2590 aa3.99□□□□□ -1.77
CPSF2-201ENST00000298875 MTORP42345 2549 aa3.99□□□□□ -1.77
CPSF2-201ENST00000298875 LINC00242Q5T6M2 205 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 PRO0461Q9UI25 63 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 FN1P02751 2386 aaKnown RBP3.98□□□□□ -1.77
CPSF2-201ENST00000298875 AMELXQ99217 191 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 IGLV5-52A0A0A0MRZ9 124 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 ACANP16112 2415 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 Q9UF83 564 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 URB1-AS1Q96HZ7 61 aa3.98□□□□□ -1.77
CPSF2-201ENST00000298875 A0A087WSZ3 146 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 A8MTW9 85 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 PRLHP81277 87 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 C2orf48Q96LS8 159 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 ACYP2P14621 99 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 LINC01556Q5JQF7 62 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 MOBPQ13875 183 aa3.97□□□□□ -1.77
CPSF2-201ENST00000298875 Q8N2B8 174 aa3.96□□□□□ -1.77
CPSF2-201ENST00000298875 IGLV4-60A0A075B6I1 120 aa3.96□□□□□ -1.78
CPSF2-201ENST00000298875 C11orf72Q8NBR9 251 aa3.96□□□□□ -1.78
CPSF2-201ENST00000298875 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
CPSF2-201ENST00000298875 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms