RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 SFTA2Q6UW10 78 aa9.21□□□□□ -0.94
CHMP4C-201ENST00000297265 KLK12Q9UKR0 248 aa9.21□□□□□ -0.94
CHMP4C-201ENST00000297265 DNAH9Q9NYC9 4486 aa9.2□□□□□ -0.94
CHMP4C-201ENST00000297265 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
CHMP4C-201ENST00000297265 Q8IZM0 81 aa9.19□□□□□ -0.94
CHMP4C-201ENST00000297265 H3BMG7 143 aa9.19□□□□□ -0.94
CHMP4C-201ENST00000297265 COX7A2LO14548 114 aa9.17□□□□□ -0.94
CHMP4C-201ENST00000297265 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
CHMP4C-201ENST00000297265 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
CHMP4C-201ENST00000297265 PPDPFQ9H3Y8 114 aa9.17□□□□□ -0.94
CHMP4C-201ENST00000297265 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
CHMP4C-201ENST00000297265 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
CHMP4C-201ENST00000297265 IBA57-AS1B1ANH7 110 aa9.16□□□□□ -0.94
CHMP4C-201ENST00000297265 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
CHMP4C-201ENST00000297265 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
CHMP4C-201ENST00000297265 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
CHMP4C-201ENST00000297265 GAGE12HA6NDE8 117 aa9.15□□□□□ -0.94
CHMP4C-201ENST00000297265 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
CHMP4C-201ENST00000297265 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.95
CHMP4C-201ENST00000297265 H7C2G1 150 aa9.15□□□□□ -0.95
CHMP4C-201ENST00000297265 TCL1BO95988 128 aa9.15□□□□□ -0.95
CHMP4C-201ENST00000297265 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 UBE2WQ96B02 151 aa9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 TRIAP1O43715 76 aa9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 PFN2P35080 140 aa9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 LINC00158P58513 81 aa9.13□□□□□ -0.95
CHMP4C-201ENST00000297265 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 F8W1H4 67 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 MALP21145 153 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 PSMB2P49721 201 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 CCL18P55774 89 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 WFDC2Q14508 124 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
CHMP4C-201ENST00000297265 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 LINC01556Q5JQF7 62 aa9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 DNAH1Q9P2D7 4330 aa9.11□□□□□ -0.95
CHMP4C-201ENST00000297265 TRBV20-1A0A075B6N2 111 aa9.1□□□□□ -0.95
CHMP4C-201ENST00000297265 CKS1BP61024 79 aa9.1□□□□□ -0.95
CHMP4C-201ENST00000297265 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
CHMP4C-201ENST00000297265 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
CHMP4C-201ENST00000297265 CRPP02741 224 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 CXCL5P42830 114 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 Q1RN00 199 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 LINC00588Q9Y4M8 146 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 LYSTQ99698 3801 aa9.09□□□□□ -0.95
CHMP4C-201ENST00000297265 DNAH10OSP0CZ25 163 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 OCIAD2Q56VL3 154 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 SND1-IT1Q9HBX3 110 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 LYRM7Q5U5X0 104 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
CHMP4C-201ENST00000297265 SPAG11BQ08648 103 aa9.07□□□□□ -0.96
CHMP4C-201ENST00000297265 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
CHMP4C-201ENST00000297265 DYNC2H1Q8NCM8 4307 aaKnown RBP9.07□□□□□ -0.96
CHMP4C-201ENST00000297265 COX17Q14061 63 aa9.06□□□□□ -0.96
CHMP4C-201ENST00000297265 B9D2Q9BPU9 175 aa9.06□□□□□ -0.96
CHMP4C-201ENST00000297265 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
CHMP4C-201ENST00000297265 PRKDCP78527 4128 aaKnown RBP9.05□□□□□ -0.96
CHMP4C-201ENST00000297265 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
CHMP4C-201ENST00000297265 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
CHMP4C-201ENST00000297265 Q8NDZ9 215 aa9.03□□□□□ -0.96
CHMP4C-201ENST00000297265 CLEC2BQ92478 149 aa9.03□□□□□ -0.96
CHMP4C-201ENST00000297265 GVQW2A0A096LPI5 108 aaPredicted RBP9.02□□□□□ -0.96
CHMP4C-201ENST00000297265 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.96
CHMP4C-201ENST00000297265 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.97
CHMP4C-201ENST00000297265 DNAH7Q8WXX0 4024 aa9.01□□□□□ -0.97
CHMP4C-201ENST00000297265 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
CHMP4C-201ENST00000297265 ATXN8Q156A1 80 aa9.01□□□□□ -0.97
CHMP4C-201ENST00000297265 LINC01620Q4KN68 170 aa9.01□□□□□ -0.97
CHMP4C-201ENST00000297265 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
CHMP4C-201ENST00000297265 C1orf43Q9BWL3 253 aa9.01□□□□□ -0.97
CHMP4C-201ENST00000297265 LST1O00453 97 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 COX6CP09669 75 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 RPL28P46779 137 aaKnown RBP9□□□□□ -0.97
CHMP4C-201ENST00000297265 HIGD2BQ4VC39 106 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 C9JAW5 83 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 LINC01600Q96MT4 127 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 MEGF8Q7Z7M0 2845 aa9□□□□□ -0.97
CHMP4C-201ENST00000297265 NDUFC2O95298 119 aa8.99□□□□□ -0.97
CHMP4C-201ENST00000297265 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
CHMP4C-201ENST00000297265 K7ERU9 68 aa8.98□□□□□ -0.97
CHMP4C-201ENST00000297265 SLC25A20O43772 301 aa8.98□□□□□ -0.97
CHMP4C-201ENST00000297265 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
CHMP4C-201ENST00000297265 FAM218AQ96MZ4 157 aa8.98□□□□□ -0.97
CHMP4C-201ENST00000297265 Q9HAA7 133 aa8.98□□□□□ -0.97
CHMP4C-201ENST00000297265 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
CHMP4C-201ENST00000297265 ZNF561-AS1K7EIQ3 104 aa8.97□□□□□ -0.97
CHMP4C-201ENST00000297265 M0QXV9 152 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms