RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GTF2H5Q6ZYL4 71 aa7.09□□□□□ -1.27
RFC4-201ENST00000296273 SH2D6Q7Z4S9 175 aa7.09□□□□□ -1.27
RFC4-201ENST00000296273 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
RFC4-201ENST00000296273 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
RFC4-201ENST00000296273 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
RFC4-201ENST00000296273 LINC00694P0DN24 101 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 SRSF9Q13242 221 aaKnown RBP eCLIP7.08□□□□□ -1.28
RFC4-201ENST00000296273 VAMP3Q15836 100 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 AMMECR1LQ6DCA0 310 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 FAM104AQ969W3 186 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
RFC4-201ENST00000296273 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 IGHV3-38A0A0C4DH36 116 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 A0A1B0GWB2 263 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 CCL25O15444 150 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
RFC4-201ENST00000296273 GYPEP15421 78 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 CDC42SE2Q9NRR3 84 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 Q9UF83 564 aa7.08□□□□□ -1.28
RFC4-201ENST00000296273 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
RFC4-201ENST00000296273 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
RFC4-201ENST00000296273 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
RFC4-201ENST00000296273 HAMPP81172 84 aa7.07□□□□□ -1.28
RFC4-201ENST00000296273 NTM-AS1Q6ZSK4 140 aa7.07□□□□□ -1.28
RFC4-201ENST00000296273 Q6ZUT4 128 aa7.07□□□□□ -1.28
RFC4-201ENST00000296273 COPS9Q8WXC6 57 aa7.07□□□□□ -1.28
RFC4-201ENST00000296273 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
RFC4-201ENST00000296273 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
RFC4-201ENST00000296273 TIMM17BO60830 172 aa7.06□□□□□ -1.28
RFC4-201ENST00000296273 IGHV3-30-3P0DP02 117 aa7.06□□□□□ -1.28
RFC4-201ENST00000296273 SERTAD4-AS1Q5TG53 156 aa7.06□□□□□ -1.28
RFC4-201ENST00000296273 Q8N814 137 aa7.06□□□□□ -1.28
RFC4-201ENST00000296273 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
RFC4-201ENST00000296273 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
RFC4-201ENST00000296273 A0A0J9YXY3 114 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 A0A1B0GUV1 79 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 IBA57-AS1B1ANH7 110 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 FABP2P12104 132 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 FXYD2P54710 66 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 LINC01556Q5JQF7 62 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 SFTA2Q6UW10 78 aa7.05□□□□□ -1.28
RFC4-201ENST00000296273 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
RFC4-201ENST00000296273 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
RFC4-201ENST00000296273 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
RFC4-201ENST00000296273 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
RFC4-201ENST00000296273 LYRM7Q5U5X0 104 aa7.04□□□□□ -1.28
RFC4-201ENST00000296273 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
RFC4-201ENST00000296273 NHP2Q9NX24 153 aaKnown RBP7.04□□□□□ -1.28
RFC4-201ENST00000296273 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.03□□□□□ -1.28
RFC4-201ENST00000296273 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
RFC4-201ENST00000296273 IFITM1P13164 125 aa7.03□□□□□ -1.28
RFC4-201ENST00000296273 HERV-K104P63124 156 aa7.03□□□□□ -1.28
RFC4-201ENST00000296273 LINC00242Q5T6M2 205 aa7.03□□□□□ -1.28
RFC4-201ENST00000296273 FAM30AQ9NZY2 134 aa7.03□□□□□ -1.28
RFC4-201ENST00000296273 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 H3BUT2 72 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 NDUFA1O15239 70 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 TSPEAR-AS2P59090 65 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 LINC01561Q8N1V8 128 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 CHCHD5Q9BSY4 110 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 SPANXDQ9BXN6 97 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 NDUFA12Q9UI09 145 aa7.02□□□□□ -1.29
RFC4-201ENST00000296273 K7EP34 96 aa7.01□□□□□ -1.29
RFC4-201ENST00000296273 Q6ZSA8 131 aa7.01□□□□□ -1.29
RFC4-201ENST00000296273 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
RFC4-201ENST00000296273 RAB37Q96AX2 223 aa7□□□□□ -1.29
RFC4-201ENST00000296273 Q9HAA7 133 aa7□□□□□ -1.29
RFC4-201ENST00000296273 LOC100131303A0A0U1RQF7 123 aa6.99□□□□□ -1.29
RFC4-201ENST00000296273 RNASE13Q5GAN3 156 aaKnown RBP6.99□□□□□ -1.29
RFC4-201ENST00000296273 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 OXTP01178 125 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 GAGE6Q13070 117 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 SS18Q15532 418 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 LELP1Q5T871 98 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 PRO1854Q9UHT4 67 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
RFC4-201ENST00000296273 TRAV8-3A0A0A6YYJ7 113 aa6.97□□□□□ -1.29
RFC4-201ENST00000296273 SMIM1B2RUZ4 78 aa6.97□□□□□ -1.29
RFC4-201ENST00000296273 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
RFC4-201ENST00000296273 MIAQ16674 131 aa6.97□□□□□ -1.29
RFC4-201ENST00000296273 DNAH8Q96JB1 4490 aa6.97□□□□□ -1.29
RFC4-201ENST00000296273 TRBV20-1A0A075B6N2 111 aa6.96□□□□□ -1.29
RFC4-201ENST00000296273 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.29
RFC4-201ENST00000296273 A0A087WZ39 114 aa6.96□□□□□ -1.29
RFC4-201ENST00000296273 COX6A2Q02221 97 aa6.96□□□□□ -1.29
RFC4-201ENST00000296273 IGHV3OR16-9A0A0B4J2B5 98 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 F8W1H4 67 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 RBX1P62877 108 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 MUSTN1Q8IVN3 82 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 LITAFQ99732 161 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 K7ERJ3 54 aa6.95□□□□□ -1.3
RFC4-201ENST00000296273 PRSS2P07478 247 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms