RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
ITGB5-201ENST00000296181 LOC107984640A0A0U1RRK4 108 aa13.18□□□□□ -0.3
ITGB5-201ENST00000296181 PDE6GP18545 87 aa13.16□□□□□ -0.3
ITGB5-201ENST00000296181 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
ITGB5-201ENST00000296181 FAM110AQ9BQ89 295 aa13.16□□□□□ -0.3
ITGB5-201ENST00000296181 LINC00846Q9NV44 126 aa13.16□□□□□ -0.3
ITGB5-201ENST00000296181 ATP5EP2Q5VTU8 51 aa13.15□□□□□ -0.3
ITGB5-201ENST00000296181 Q6JHZ5 121 aa13.15□□□□□ -0.3
ITGB5-201ENST00000296181 BEAN1Q3B7T3 259 aa13.15□□□□□ -0.3
ITGB5-201ENST00000296181 C5orf47Q569G3 176 aa13.14□□□□□ -0.31
ITGB5-201ENST00000296181 CD164L2Q6UWJ8 174 aa13.14□□□□□ -0.31
ITGB5-201ENST00000296181 LINC01006Q8NI28 216 aa13.13□□□□□ -0.31
ITGB5-201ENST00000296181 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
ITGB5-201ENST00000296181 SOSTDC1Q6X4U4 206 aa13.13□□□□□ -0.31
ITGB5-201ENST00000296181 BPY2O14599 106 aa13.13□□□□□ -0.31
ITGB5-201ENST00000296181 PPDPFQ9H3Y8 114 aa13.12□□□□□ -0.31
ITGB5-201ENST00000296181 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
ITGB5-201ENST00000296181 A0A087WZ39 114 aa13.12□□□□□ -0.31
ITGB5-201ENST00000296181 BRK1Q8WUW1 75 aa13.12□□□□□ -0.31
ITGB5-201ENST00000296181 MPLKIPQ8TAP9 179 aa13.11□□□□□ -0.31
ITGB5-201ENST00000296181 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
ITGB5-201ENST00000296181 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
ITGB5-201ENST00000296181 NTM-AS1Q6ZSK4 140 aa13.11□□□□□ -0.31
ITGB5-201ENST00000296181 UNQ6190/PRO20217Q6UXQ8 127 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 FAM218AQ96MZ4 157 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 DMXL2Q8TDJ6 3036 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 KALRNO60229 2985 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 CCKP06307 115 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 ATMQ13315 3056 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 EIF4EBP3O60516 100 aaPredicted RBP13.1□□□□□ -0.31
ITGB5-201ENST00000296181 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
ITGB5-201ENST00000296181 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
ITGB5-201ENST00000296181 C3orf84H3BNL1 204 aa13.09□□□□□ -0.31
ITGB5-201ENST00000296181 FAM19A1Q7Z5A9 133 aa13.09□□□□□ -0.31
ITGB5-201ENST00000296181 Q8IZM0 81 aa13.09□□□□□ -0.31
ITGB5-201ENST00000296181 A8MTW9 85 aa13.08□□□□□ -0.32
ITGB5-201ENST00000296181 H3BQ85 93 aa13.08□□□□□ -0.32
ITGB5-201ENST00000296181 FAM19A5Q7Z5A7 132 aaPredicted RBP13.08□□□□□ -0.32
ITGB5-201ENST00000296181 NDUFC2O95298 119 aa13.08□□□□□ -0.32
ITGB5-201ENST00000296181 Q8N814 137 aa13.08□□□□□ -0.32
ITGB5-201ENST00000296181 HRCT1Q6UXD1 115 aa13.08□□□□□ -0.32
ITGB5-201ENST00000296181 LOC400499M0QZD8 3231 aa13.07□□□□□ -0.32
ITGB5-201ENST00000296181 HILS1P60008 231 aa13.06□□□□□ -0.32
ITGB5-201ENST00000296181 LYRM9A8MSI8 78 aa13.06□□□□□ -0.32
ITGB5-201ENST00000296181 LITAFQ99732 161 aa13.06□□□□□ -0.32
ITGB5-201ENST00000296181 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
ITGB5-201ENST00000296181 CYSRT1A8MQ03 144 aa13.05□□□□□ -0.32
ITGB5-201ENST00000296181 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
ITGB5-201ENST00000296181 FHL2Q14192 279 aa13.04□□□□□ -0.32
ITGB5-201ENST00000296181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.04□□□□□ -0.32
ITGB5-201ENST00000296181 CDK2AP2O75956 126 aa13.04□□□□□ -0.32
ITGB5-201ENST00000296181 ZZEF1O43149 2961 aa13.04□□□□□ -0.32
ITGB5-201ENST00000296181 SMR3AQ99954 134 aa13.04□□□□□ -0.32
ITGB5-201ENST00000296181 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
ITGB5-201ENST00000296181 IGKV2-28A0A075B6P5 120 aa13.03□□□□□ -0.32
ITGB5-201ENST00000296181 IGKV2D-28P01615 120 aa13.03□□□□□ -0.32
ITGB5-201ENST00000296181 PKIGQ9Y2B9 76 aa13.02□□□□□ -0.32
ITGB5-201ENST00000296181 A0A0U1RQV1 116 aa13.02□□□□□ -0.33
ITGB5-201ENST00000296181 INAFM1C9JVW0 142 aa13.02□□□□□ -0.33
ITGB5-201ENST00000296181 NHLRC4P0CG21 123 aaPredicted RBP13.01□□□□□ -0.33
ITGB5-201ENST00000296181 USP34Q70CQ2 3546 aa13□□□□□ -0.33
ITGB5-201ENST00000296181 TACC2O95359 2948 aa13□□□□□ -0.33
ITGB5-201ENST00000296181 IGHV3OR16-9A0A0B4J2B5 98 aa12.99□□□□□ -0.33
ITGB5-201ENST00000296181 RMI2Q96E14 147 aa12.99□□□□□ -0.33
ITGB5-201ENST00000296181 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
ITGB5-201ENST00000296181 ZNF73O43830 326 aaPredicted RBP12.98□□□□□ -0.33
ITGB5-201ENST00000296181 C6orf223Q8N319 242 aa12.98□□□□□ -0.33
ITGB5-201ENST00000296181 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
ITGB5-201ENST00000296181 ATRQ13535 2644 aa12.97□□□□□ -0.33
ITGB5-201ENST00000296181 KLK9Q2XQG4 91 aa12.97□□□□□ -0.33
ITGB5-201ENST00000296181 COX17Q14061 63 aa12.97□□□□□ -0.33
ITGB5-201ENST00000296181 SVIPQ8NHG7 77 aa12.97□□□□□ -0.33
ITGB5-201ENST00000296181 MP68P56378 58 aa12.97□□□□□ -0.33
ITGB5-201ENST00000296181 IGKV2-24A0A0C4DH68 120 aa12.96□□□□□ -0.34
ITGB5-201ENST00000296181 IGLV1-51P01701 117 aa12.95□□□□□ -0.34
ITGB5-201ENST00000296181 CHD6Q8TD26 2715 aa12.95□□□□□ -0.34
ITGB5-201ENST00000296181 PRR4Q16378 134 aa12.95□□□□□ -0.34
ITGB5-201ENST00000296181 HIGD2AQ9BW72 106 aa12.95□□□□□ -0.34
ITGB5-201ENST00000296181 Q8N3U1 123 aa12.94□□□□□ -0.34
ITGB5-201ENST00000296181 A0A096LNI7 61 aa12.94□□□□□ -0.34
ITGB5-201ENST00000296181 NDUFS5O43920 106 aa12.93□□□□□ -0.34
ITGB5-201ENST00000296181 COL12A1Q99715 3063 aa12.93□□□□□ -0.34
ITGB5-201ENST00000296181 SMCR5Q8TEV8 140 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 TRAV7A0A075B6U4 112 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 LELP1Q5T871 98 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 DMXL1Q9Y485 3027 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 SYCNQ0VAF6 134 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 CELA1Q9UNI1 258 aa12.92□□□□□ -0.34
ITGB5-201ENST00000296181 NDUFC2-KCTD14E9PQ53 114 aa12.91□□□□□ -0.34
ITGB5-201ENST00000296181 FAM19A3Q7Z5A8 133 aa12.91□□□□□ -0.34
ITGB5-201ENST00000296181 LRBAP50851 2863 aa12.91□□□□□ -0.34
ITGB5-201ENST00000296181 MIFP14174 115 aa12.91□□□□□ -0.34
ITGB5-201ENST00000296181 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
ITGB5-201ENST00000296181 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
ITGB5-201ENST00000296181 M0R378 163 aa12.89□□□□□ -0.35
ITGB5-201ENST00000296181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.89□□□□□ -0.35
ITGB5-201ENST00000296181 FLNCQ14315 2725 aa12.89□□□□□ -0.35
ITGB5-201ENST00000296181 LY6G6DO95868 133 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms