RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 OBSCN-AS1Q96MR7 158 aa13.33□□□□□ -0.28
LSM12-201ENST00000293406 GYPEP15421 78 aa13.33□□□□□ -0.28
LSM12-201ENST00000293406 SS18Q15532 418 aa13.33□□□□□ -0.28
LSM12-201ENST00000293406 SETD2Q9BYW2 2564 aaPredicted RBP13.32□□□□□ -0.28
LSM12-201ENST00000293406 C3orf22Q8N5N4 141 aa13.32□□□□□ -0.28
LSM12-201ENST00000293406 USP24Q9UPU5 2620 aa13.32□□□□□ -0.28
LSM12-201ENST00000293406 LY6G6DO95868 133 aa13.31□□□□□ -0.28
LSM12-201ENST00000293406 KLK5Q9Y337 293 aaPredicted RBP13.31□□□□□ -0.28
LSM12-201ENST00000293406 RNASE1P07998 156 aaKnown RBP13.31□□□□□ -0.28
LSM12-201ENST00000293406 KIR2DL5BQ8NHK3 375 aa13.31□□□□□ -0.28
LSM12-201ENST00000293406 SLPIP03973 132 aa13.3□□□□□ -0.28
LSM12-201ENST00000293406 C9orf153Q5TBE3 101 aa13.3□□□□□ -0.28
LSM12-201ENST00000293406 UQCRQO14949 82 aa13.3□□□□□ -0.28
LSM12-201ENST00000293406 Q8IZM0 81 aa13.3□□□□□ -0.28
LSM12-201ENST00000293406 A0A1B0GUV1 79 aa13.29□□□□□ -0.28
LSM12-201ENST00000293406 NCR3O14931 201 aa13.29□□□□□ -0.28
LSM12-201ENST00000293406 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
LSM12-201ENST00000293406 ORMDL1Q9P0S3 153 aa13.28□□□□□ -0.28
LSM12-201ENST00000293406 CCDC168Q8NDH2 2452 aa13.27□□□□□ -0.28
LSM12-201ENST00000293406 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.28
LSM12-201ENST00000293406 LINC00846Q9NV44 126 aa13.27□□□□□ -0.28
LSM12-201ENST00000293406 FLNAP21333 2647 aaKnown RBP13.26□□□□□ -0.29
LSM12-201ENST00000293406 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
LSM12-201ENST00000293406 HIST1H4AP62805 103 aaKnown RBP13.25□□□□□ -0.29
LSM12-201ENST00000293406 A0A096LPF7 62 aa13.25□□□□□ -0.29
LSM12-201ENST00000293406 IGKV3D-7A0A0C4DH55 119 aa13.24□□□□□ -0.29
LSM12-201ENST00000293406 Q6JHZ5 121 aa13.24□□□□□ -0.29
LSM12-201ENST00000293406 LINC01561Q8N1V8 128 aa13.24□□□□□ -0.29
LSM12-201ENST00000293406 PRO0255Q9UI72 69 aa13.24□□□□□ -0.29
LSM12-201ENST00000293406 ATOX1O00244 68 aa13.23□□□□□ -0.29
LSM12-201ENST00000293406 COX7CP15954 63 aa13.23□□□□□ -0.29
LSM12-201ENST00000293406 PRR3P79522 188 aaKnown RBP13.23□□□□□ -0.29
LSM12-201ENST00000293406 KRTAP1-1Q07627 177 aa13.23□□□□□ -0.29
LSM12-201ENST00000293406 NANOS2P60321 138 aaKnown RBP13.21□□□□□ -0.29
LSM12-201ENST00000293406 LINC00167Q96N53 147 aa13.21□□□□□ -0.3
LSM12-201ENST00000293406 A0A1B0GX51 115 aa13.2□□□□□ -0.3
LSM12-201ENST00000293406 CFAP161Q6P656 301 aa13.2□□□□□ -0.3
LSM12-201ENST00000293406 LINC00269Q8N2A0 174 aa13.2□□□□□ -0.3
LSM12-201ENST00000293406 C2orf48Q96LS8 159 aa13.2□□□□□ -0.3
LSM12-201ENST00000293406 X6R8D5 127 aa13.2□□□□□ -0.3
LSM12-201ENST00000293406 RPL18AQ02543 176 aaKnown RBP13.19□□□□□ -0.3
LSM12-201ENST00000293406 Q8N814 137 aa13.19□□□□□ -0.3
LSM12-201ENST00000293406 NDUFC2O95298 119 aa13.19□□□□□ -0.3
LSM12-201ENST00000293406 COX17Q14061 63 aa13.19□□□□□ -0.3
LSM12-201ENST00000293406 KIAA0087Q14695 138 aa13.19□□□□□ -0.3
LSM12-201ENST00000293406 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
LSM12-201ENST00000293406 CCKP06307 115 aa13.18□□□□□ -0.3
LSM12-201ENST00000293406 SMIM9A6NGZ8 99 aa13.17□□□□□ -0.3
LSM12-201ENST00000293406 JMJD7-PLA2G4BH0Y9G9 81 aa13.17□□□□□ -0.3
LSM12-201ENST00000293406 CHCHD10Q8WYQ3 142 aaPredicted RBP13.17□□□□□ -0.3
LSM12-201ENST00000293406 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
LSM12-201ENST00000293406 TMEM256-PLSCR3K7ERE1 68 aa13.16□□□□□ -0.3
LSM12-201ENST00000293406 FN1P02751 2386 aaKnown RBP13.15□□□□□ -0.3
LSM12-201ENST00000293406 A0A087WVE0 104 aa13.15□□□□□ -0.3
LSM12-201ENST00000293406 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
LSM12-201ENST00000293406 CRYGAP11844 174 aa13.14□□□□□ -0.31
LSM12-201ENST00000293406 HILS1P60008 231 aa13.14□□□□□ -0.31
LSM12-201ENST00000293406 ANK3Q12955 4377 aaKnown RBP13.14□□□□□ -0.31
LSM12-201ENST00000293406 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
LSM12-201ENST00000293406 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
LSM12-201ENST00000293406 REG3AQ06141 175 aa13.13□□□□□ -0.31
LSM12-201ENST00000293406 Q8N3U1 123 aa13.13□□□□□ -0.31
LSM12-201ENST00000293406 MTORP42345 2549 aa13.13□□□□□ -0.31
LSM12-201ENST00000293406 LYRM9A8MSI8 78 aa13.12□□□□□ -0.31
LSM12-201ENST00000293406 LINC00482Q8N8I6 264 aa13.12□□□□□ -0.31
LSM12-201ENST00000293406 ACANP16112 2415 aa13.12□□□□□ -0.31
LSM12-201ENST00000293406 C6orf99Q4VX62 202 aa13.11□□□□□ -0.31
LSM12-201ENST00000293406 S100A7L2Q5SY68 101 aa13.11□□□□□ -0.31
LSM12-201ENST00000293406 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
LSM12-201ENST00000293406 GCN1Q92616 2671 aaKnown RBP13.1□□□□□ -0.31
LSM12-201ENST00000293406 DEFB4AO15263 64 aa13.1□□□□□ -0.31
LSM12-201ENST00000293406 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
LSM12-201ENST00000293406 USP17L23D6RBM5 183 aa13.09□□□□□ -0.31
LSM12-201ENST00000293406 SERP2Q8N6R1 65 aa13.09□□□□□ -0.31
LSM12-201ENST00000293406 Q8NDZ9 215 aa13.09□□□□□ -0.31
LSM12-201ENST00000293406 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
LSM12-201ENST00000293406 DEFB135Q30KP9 77 aa13.07□□□□□ -0.32
LSM12-201ENST00000293406 PDZD2O15018 2839 aa13.06□□□□□ -0.32
LSM12-201ENST00000293406 DAD1P61803 113 aa13.05□□□□□ -0.32
LSM12-201ENST00000293406 ATP5EP2Q5VTU8 51 aa13.05□□□□□ -0.32
LSM12-201ENST00000293406 LINC00575Q6W349 94 aa13.05□□□□□ -0.32
LSM12-201ENST00000293406 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
LSM12-201ENST00000293406 C6orf223Q8N319 242 aa13.04□□□□□ -0.32
LSM12-201ENST00000293406 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
LSM12-201ENST00000293406 UNQ6190/PRO20217Q6UXQ8 127 aa13.04□□□□□ -0.32
LSM12-201ENST00000293406 CYSTM1Q9H1C7 97 aa13.04□□□□□ -0.32
LSM12-201ENST00000293406 UBL5Q9BZL1 73 aa13.02□□□□□ -0.33
LSM12-201ENST00000293406 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
LSM12-201ENST00000293406 MUC7Q8TAX7 377 aa13.01□□□□□ -0.33
LSM12-201ENST00000293406 UPK3BQ9BT76 320 aa13.01□□□□□ -0.33
LSM12-201ENST00000293406 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
LSM12-201ENST00000293406 LOC107984640A0A0U1RRK4 108 aa13□□□□□ -0.33
LSM12-201ENST00000293406 J3KT08 172 aa13□□□□□ -0.33
LSM12-201ENST00000293406 C9orf66Q5T8R8 295 aa13□□□□□ -0.33
LSM12-201ENST00000293406 SPATA3Q8NHX4 192 aa13□□□□□ -0.33
LSM12-201ENST00000293406 CYSRT1A8MQ03 144 aa12.99□□□□□ -0.33
LSM12-201ENST00000293406 APOC4P55056 127 aa12.99□□□□□ -0.33
LSM12-201ENST00000293406 RBM3P98179 157 aaKnown RBP12.99□□□□□ -0.33
LSM12-201ENST00000293406 ENHOQ6UWT2 76 aa12.99□□□□□ -0.33
LSM12-201ENST00000293406 CELA1Q9UNI1 258 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms