RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 HIVEP3Q5T1R4 2406 aa12.56□□□□□ -0.4
PCDHA13-201ENST00000289272 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
PCDHA13-201ENST00000289272 EDN2P20800 178 aa12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 LINC00575Q6W349 94 aa12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 IGLV5-45A0A087WSX0 123 aa12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 HIGD2AQ9BW72 106 aa12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 DNAH12Q6ZR08 3092 aa12.54□□□□□ -0.4
PCDHA13-201ENST00000289272 hDV103S1A0JD37 113 aa12.53□□□□□ -0.4
PCDHA13-201ENST00000289272 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
PCDHA13-201ENST00000289272 SOSTDC1Q6X4U4 206 aa12.53□□□□□ -0.4
PCDHA13-201ENST00000289272 PRM2P04554 102 aa12.53□□□□□ -0.4
PCDHA13-201ENST00000289272 CASC2Q6XLA1 102 aa12.53□□□□□ -0.4
PCDHA13-201ENST00000289272 A0A1B0GUV1 79 aa12.52□□□□□ -0.4
PCDHA13-201ENST00000289272 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
PCDHA13-201ENST00000289272 ZNF706Q9Y5V0 76 aaPredicted RBP12.52□□□□□ -0.41
PCDHA13-201ENST00000289272 LIMD2Q9BT23 127 aa12.51□□□□□ -0.41
PCDHA13-201ENST00000289272 WFDC13Q8IUB5 93 aa12.5□□□□□ -0.41
PCDHA13-201ENST00000289272 FAM19A4Q96LR4 140 aa12.5□□□□□ -0.41
PCDHA13-201ENST00000289272 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
PCDHA13-201ENST00000289272 CYSRT1A8MQ03 144 aa12.5□□□□□ -0.41
PCDHA13-201ENST00000289272 LINC00337Q8N6G1 96 aa12.48□□□□□ -0.41
PCDHA13-201ENST00000289272 LINC00315P59091 139 aa12.48□□□□□ -0.41
PCDHA13-201ENST00000289272 IGLV1-51P01701 117 aa12.47□□□□□ -0.41
PCDHA13-201ENST00000289272 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
PCDHA13-201ENST00000289272 KPRPQ5T749 579 aaPredicted RBP12.47□□□□□ -0.41
PCDHA13-201ENST00000289272 KRTAP10-9P60411 292 aa12.47□□□□□ -0.41
PCDHA13-201ENST00000289272 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
PCDHA13-201ENST00000289272 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.41
PCDHA13-201ENST00000289272 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.42
PCDHA13-201ENST00000289272 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
PCDHA13-201ENST00000289272 MYO18BQ8IUG5 2567 aa12.45□□□□□ -0.42
PCDHA13-201ENST00000289272 PLAC8L1A1L4L8 177 aa12.44□□□□□ -0.42
PCDHA13-201ENST00000289272 LOC110117498A0A087WWA1 95 aa12.44□□□□□ -0.42
PCDHA13-201ENST00000289272 LINC00208Q96KT6 92 aa12.43□□□□□ -0.42
PCDHA13-201ENST00000289272 IGHV4-30-4P0DP06 118 aa12.42□□□□□ -0.42
PCDHA13-201ENST00000289272 PRR4Q16378 134 aa12.41□□□□□ -0.42
PCDHA13-201ENST00000289272 ERC2-IT1O76042 136 aa12.41□□□□□ -0.42
PCDHA13-201ENST00000289272 C2orf48Q96LS8 159 aa12.41□□□□□ -0.42
PCDHA13-201ENST00000289272 ABCA2Q9BZC7 2435 aa12.41□□□□□ -0.42
PCDHA13-201ENST00000289272 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.42
PCDHA13-201ENST00000289272 IGKV2D-28P01615 120 aa12.4□□□□□ -0.42
PCDHA13-201ENST00000289272 PRRC2AP48634 2157 aaKnown RBP12.4□□□□□ -0.42
PCDHA13-201ENST00000289272 C4orf26Q17RF5 130 aa12.4□□□□□ -0.42
PCDHA13-201ENST00000289272 UNQ6190/PRO20217Q6UXQ8 127 aa12.4□□□□□ -0.42
PCDHA13-201ENST00000289272 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
PCDHA13-201ENST00000289272 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
PCDHA13-201ENST00000289272 H3BPC8 53 aa12.39□□□□□ -0.43
PCDHA13-201ENST00000289272 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
PCDHA13-201ENST00000289272 FHL2Q14192 279 aa12.38□□□□□ -0.43
PCDHA13-201ENST00000289272 KLK9Q2XQG4 91 aa12.37□□□□□ -0.43
PCDHA13-201ENST00000289272 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
PCDHA13-201ENST00000289272 A0A096LNI7 61 aa12.37□□□□□ -0.43
PCDHA13-201ENST00000289272 LINC00474Q9P2X8 69 aa12.37□□□□□ -0.43
PCDHA13-201ENST00000289272 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
PCDHA13-201ENST00000289272 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
PCDHA13-201ENST00000289272 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
PCDHA13-201ENST00000289272 RETNQ9HD89 108 aa12.35□□□□□ -0.43
PCDHA13-201ENST00000289272 USP9XQ93008 2570 aaPredicted RBP12.35□□□□□ -0.43
PCDHA13-201ENST00000289272 PSPHP1O15172 72 aa12.35□□□□□ -0.43
PCDHA13-201ENST00000289272 Q6ZSN1 163 aa12.34□□□□□ -0.43
PCDHA13-201ENST00000289272 PCSK5Q92824 1860 aa12.33□□□□□ -0.44
PCDHA13-201ENST00000289272 H0Y9P7 68 aa12.33□□□□□ -0.44
PCDHA13-201ENST00000289272 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
PCDHA13-201ENST00000289272 Q8N2B8 174 aa12.33□□□□□ -0.44
PCDHA13-201ENST00000289272 C6orf223Q8N319 242 aa12.33□□□□□ -0.44
PCDHA13-201ENST00000289272 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
PCDHA13-201ENST00000289272 A0A0J9YWU9 116 aa12.32□□□□□ -0.44
PCDHA13-201ENST00000289272 Q6ZQT0 140 aa12.32□□□□□ -0.44
PCDHA13-201ENST00000289272 SMR3AQ99954 134 aa12.32□□□□□ -0.44
PCDHA13-201ENST00000289272 IGHV3OR16-9A0A0B4J2B5 98 aa12.32□□□□□ -0.44
PCDHA13-201ENST00000289272 SPATA3Q8NHX4 192 aa12.32□□□□□ -0.44
PCDHA13-201ENST00000289272 LITAFQ99732 161 aa12.31□□□□□ -0.44
PCDHA13-201ENST00000289272 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
PCDHA13-201ENST00000289272 FAM218AQ96MZ4 157 aa12.3□□□□□ -0.44
PCDHA13-201ENST00000289272 C11orf72Q8NBR9 251 aa12.3□□□□□ -0.44
PCDHA13-201ENST00000289272 REG3GQ6UW15 175 aa12.3□□□□□ -0.44
PCDHA13-201ENST00000289272 PRR3P79522 188 aaKnown RBP12.29□□□□□ -0.44
PCDHA13-201ENST00000289272 USP9YO00507 2555 aaPredicted RBP12.29□□□□□ -0.44
PCDHA13-201ENST00000289272 TLN2Q9Y4G6 2542 aa12.29□□□□□ -0.44
PCDHA13-201ENST00000289272 NANOS2P60321 138 aaKnown RBP12.28□□□□□ -0.44
PCDHA13-201ENST00000289272 UTRNP46939 3433 aa12.28□□□□□ -0.44
PCDHA13-201ENST00000289272 C9orf116Q5BN46 136 aaPredicted RBP12.28□□□□□ -0.44
PCDHA13-201ENST00000289272 AGRNO00468 2067 aa12.27□□□□□ -0.44
PCDHA13-201ENST00000289272 LINC01600Q96MT4 127 aa12.27□□□□□ -0.45
PCDHA13-201ENST00000289272 FHL3Q13643 280 aa12.25□□□□□ -0.45
PCDHA13-201ENST00000289272 RPL37AP8A6NKH3 93 aa12.24□□□□□ -0.45
PCDHA13-201ENST00000289272 TP53AIP1Q9HCN2 124 aa12.24□□□□□ -0.45
PCDHA13-201ENST00000289272 ABCA12Q86UK0 2595 aa12.24□□□□□ -0.45
PCDHA13-201ENST00000289272 PTPRBP23467 1997 aa12.23□□□□□ -0.45
PCDHA13-201ENST00000289272 SMCR5Q8TEV8 140 aa12.23□□□□□ -0.45
PCDHA13-201ENST00000289272 KLKP1Q107X0 134 aa12.22□□□□□ -0.45
PCDHA13-201ENST00000289272 SMIM29Q86T20 159 aa12.21□□□□□ -0.45
PCDHA13-201ENST00000289272 WIPF1O43516 503 aa12.2□□□□□ -0.46
PCDHA13-201ENST00000289272 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
PCDHA13-201ENST00000289272 LY6G6CO95867 125 aa12.19□□□□□ -0.46
PCDHA13-201ENST00000289272 CHD8Q9HCK8 2581 aa12.19□□□□□ -0.46
PCDHA13-201ENST00000289272 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
PCDHA13-201ENST00000289272 SPTBN4Q9H254 2564 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms