RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ESRGQ1W209 222 aa6.9□□□□□ -1.3
C9orf43-201ENST00000288462 DEFB121Q5J5C9 76 aa6.9□□□□□ -1.3
C9orf43-201ENST00000288462 ENHOQ6UWT2 76 aa6.9□□□□□ -1.3
C9orf43-201ENST00000288462 MRAPQ8TCY5 172 aa6.9□□□□□ -1.3
C9orf43-201ENST00000288462 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
C9orf43-201ENST00000288462 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
C9orf43-201ENST00000288462 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
C9orf43-201ENST00000288462 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
C9orf43-201ENST00000288462 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
C9orf43-201ENST00000288462 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 H3BMG7 143 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 CXCL5P42830 114 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 TRAV8-4A0A0B4J246 113 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 CRPP02741 224 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 C15orf53Q8NAA6 179 aa6.88□□□□□ -1.31
C9orf43-201ENST00000288462 TRBV20-1A0A075B6N2 111 aa6.87□□□□□ -1.31
C9orf43-201ENST00000288462 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
C9orf43-201ENST00000288462 MALP21145 153 aa6.87□□□□□ -1.31
C9orf43-201ENST00000288462 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
C9orf43-201ENST00000288462 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
C9orf43-201ENST00000288462 KLK5Q9Y337 293 aaPredicted RBP6.87□□□□□ -1.31
C9orf43-201ENST00000288462 H7C2G1 150 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 TCL1BO95988 128 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
C9orf43-201ENST00000288462 LINC00158P58513 81 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 Q1RN00 199 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 UBE2WQ96B02 151 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 TRIAP1O43715 76 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 PSMB2P49721 201 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 CKS1BP61024 79 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 CFAP161Q6P656 301 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
C9orf43-201ENST00000288462 F8W1H4 67 aa6.85□□□□□ -1.31
C9orf43-201ENST00000288462 KRTAP26-1Q6PEX3 210 aa6.85□□□□□ -1.31
C9orf43-201ENST00000288462 DNAH10OSP0CZ25 163 aa6.84□□□□□ -1.31
C9orf43-201ENST00000288462 PFN2P35080 140 aa6.84□□□□□ -1.31
C9orf43-201ENST00000288462 CCL18P55774 89 aa6.84□□□□□ -1.31
C9orf43-201ENST00000288462 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
C9orf43-201ENST00000288462 SCGB1C2P0DMR2 95 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 COX17Q14061 63 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 B9D2Q9BPU9 175 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 WFDC2Q14508 124 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 OCIAD2Q56VL3 154 aa6.83□□□□□ -1.32
C9orf43-201ENST00000288462 IGKV2-28A0A075B6P5 120 aa6.82□□□□□ -1.32
C9orf43-201ENST00000288462 IGKV2D-28P01615 120 aa6.82□□□□□ -1.32
C9orf43-201ENST00000288462 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
C9orf43-201ENST00000288462 MTURNQ8N3F0 131 aa6.82□□□□□ -1.32
C9orf43-201ENST00000288462 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
C9orf43-201ENST00000288462 TRAV13-2A0A0B4J235 113 aa6.81□□□□□ -1.32
C9orf43-201ENST00000288462 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
C9orf43-201ENST00000288462 LINC00337Q8N6G1 96 aa6.81□□□□□ -1.32
C9orf43-201ENST00000288462 CBY1Q9Y3M2 126 aa6.81□□□□□ -1.32
C9orf43-201ENST00000288462 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
C9orf43-201ENST00000288462 GVQW2A0A096LPI5 108 aaPredicted RBP6.8□□□□□ -1.32
C9orf43-201ENST00000288462 COX6CP09669 75 aa6.8□□□□□ -1.32
C9orf43-201ENST00000288462 C10orf25Q5T742 122 aa6.8□□□□□ -1.32
C9orf43-201ENST00000288462 C6orf223Q8N319 242 aa6.8□□□□□ -1.32
C9orf43-201ENST00000288462 MUC7Q8TAX7 377 aa6.8□□□□□ -1.32
C9orf43-201ENST00000288462 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
C9orf43-201ENST00000288462 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
C9orf43-201ENST00000288462 NTN5Q8WTR8 489 aaPredicted RBP6.8□□□□□ -1.32
C9orf43-201ENST00000288462 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 C9orf116Q5BN46 136 aaPredicted RBP6.79□□□□□ -1.32
C9orf43-201ENST00000288462 UPK3BQ9BT76 320 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 K7ERU9 68 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 LINC00526Q96FQ7 95 aa6.79□□□□□ -1.32
C9orf43-201ENST00000288462 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
C9orf43-201ENST00000288462 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
C9orf43-201ENST00000288462 M0QXV9 152 aa6.78□□□□□ -1.32
C9orf43-201ENST00000288462 LST1O00453 97 aa6.78□□□□□ -1.32
C9orf43-201ENST00000288462 NDUFC2O95298 119 aa6.78□□□□□ -1.32
C9orf43-201ENST00000288462 LINC01600Q96MT4 127 aa6.78□□□□□ -1.32
C9orf43-201ENST00000288462 C9JAW5 83 aa6.77□□□□□ -1.33
C9orf43-201ENST00000288462 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
C9orf43-201ENST00000288462 ETDBQ3ZM63 59 aa6.77□□□□□ -1.33
C9orf43-201ENST00000288462 CLEC2BQ92478 149 aa6.77□□□□□ -1.33
C9orf43-201ENST00000288462 IGKV2D-24A0A075B6R9 120 aa6.77□□□□□ -1.33
C9orf43-201ENST00000288462 C6orf48Q9UBA6 75 aa6.77□□□□□ -1.33
C9orf43-201ENST00000288462 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
C9orf43-201ENST00000288462 SLC25A20O43772 301 aa6.76□□□□□ -1.33
C9orf43-201ENST00000288462 PCP4P48539 62 aa6.76□□□□□ -1.33
C9orf43-201ENST00000288462 HIGD2BQ4VC39 106 aa6.76□□□□□ -1.33
C9orf43-201ENST00000288462 C2orf48Q96LS8 159 aa6.76□□□□□ -1.33
C9orf43-201ENST00000288462 F8WDY8 70 aa6.75□□□□□ -1.33
C9orf43-201ENST00000288462 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
C9orf43-201ENST00000288462 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
C9orf43-201ENST00000288462 TRBV10-2A0A0K0K1G8 114 aa6.74□□□□□ -1.33
C9orf43-201ENST00000288462 TEN1Q86WV5 123 aa6.74□□□□□ -1.33
C9orf43-201ENST00000288462 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
C9orf43-201ENST00000288462 Q9HAA7 133 aa6.74□□□□□ -1.33
C9orf43-201ENST00000288462 NHLRC4P0CG21 123 aaPredicted RBP6.74□□□□□ -1.33
C9orf43-201ENST00000288462 Q8NDZ9 215 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 385.4 ms