RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PRM2P04554 102 aa7.37□□□□□ -1.23
SKA1-201ENST00000285116 TMEM258P61165 79 aa7.37□□□□□ -1.23
SKA1-201ENST00000285116 CDC42SE2Q9NRR3 84 aa7.37□□□□□ -1.23
SKA1-201ENST00000285116 Q6JHZ5 121 aa7.37□□□□□ -1.23
SKA1-201ENST00000285116 Q9HAA7 133 aa7.37□□□□□ -1.23
SKA1-201ENST00000285116 CMC4P56277 68 aaPredicted RBP7.36□□□□□ -1.23
SKA1-201ENST00000285116 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
SKA1-201ENST00000285116 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
SKA1-201ENST00000285116 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
SKA1-201ENST00000285116 A0A1W2PRX2 142 aa7.35□□□□□ -1.23
SKA1-201ENST00000285116 CRPP02741 224 aa7.35□□□□□ -1.23
SKA1-201ENST00000285116 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
SKA1-201ENST00000285116 KRTAP1-3Q8IUG1 177 aa7.35□□□□□ -1.23
SKA1-201ENST00000285116 STHQ8IWL8 128 aa7.34□□□□□ -1.23
SKA1-201ENST00000285116 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
SKA1-201ENST00000285116 WIPF1O43516 503 aa7.34□□□□□ -1.24
SKA1-201ENST00000285116 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.24
SKA1-201ENST00000285116 UPK3BQ9BT76 320 aa7.34□□□□□ -1.24
SKA1-201ENST00000285116 INAFM1C9JVW0 142 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 CYSTM1Q9H1C7 97 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 TRGV1A0A0A0MS02 117 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 IGKV3D-7A0A0C4DH55 119 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 H0YGX0 51 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 C14orf132Q9NPU4 83 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 XCL2Q9UBD3 114 aa7.33□□□□□ -1.24
SKA1-201ENST00000285116 TMEM243Q9BU79 118 aa7.32□□□□□ -1.24
SKA1-201ENST00000285116 LINC00846Q9NV44 126 aa7.32□□□□□ -1.24
SKA1-201ENST00000285116 TRBV6-4A0A1B0GX49 114 aa7.32□□□□□ -1.24
SKA1-201ENST00000285116 LINC00337Q8N6G1 96 aa7.32□□□□□ -1.24
SKA1-201ENST00000285116 C16orf74Q96GX8 76 aa7.32□□□□□ -1.24
SKA1-201ENST00000285116 A0A087WYN8 130 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 USP17L23D6RBM5 183 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 Q6ZTI0 123 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 SND1-IT1Q9HBX3 110 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 IGKV2-28A0A075B6P5 120 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 PLAC8L1A1L4L8 177 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 IGKV2D-28P01615 120 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
SKA1-201ENST00000285116 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
SKA1-201ENST00000285116 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
SKA1-201ENST00000285116 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
SKA1-201ENST00000285116 A0A087WVE0 104 aa7.29□□□□□ -1.24
SKA1-201ENST00000285116 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
SKA1-201ENST00000285116 UBE2L6O14933 153 aa7.28□□□□□ -1.24
SKA1-201ENST00000285116 COX7B2Q8TF08 81 aa7.28□□□□□ -1.24
SKA1-201ENST00000285116 C1orf43Q9BWL3 253 aa7.28□□□□□ -1.24
SKA1-201ENST00000285116 CCL24O00175 119 aa7.28□□□□□ -1.24
SKA1-201ENST00000285116 LY6G6DO95868 133 aa7.28□□□□□ -1.24
SKA1-201ENST00000285116 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
SKA1-201ENST00000285116 IBA57-AS1B1ANH7 110 aa7.27□□□□□ -1.25
SKA1-201ENST00000285116 LECT2O14960 151 aa7.27□□□□□ -1.25
SKA1-201ENST00000285116 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
SKA1-201ENST00000285116 OXTP01178 125 aa7.27□□□□□ -1.25
SKA1-201ENST00000285116 CSNK1G2-AS1Q8NCQ2 148 aa7.27□□□□□ -1.25
SKA1-201ENST00000285116 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
SKA1-201ENST00000285116 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 NCR3O14931 201 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 C16orf95Q9H693 158 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 A0A087WZ39 114 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 DNAJC9-AS1A6NH13 148 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 NDUFC2-KCTD14E9PQ53 114 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 ZNF561-AS1K7EIQ3 104 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 LINC00158P58513 81 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 NOP10Q9NPE3 64 aaKnown RBP7.26□□□□□ -1.25
SKA1-201ENST00000285116 C19orf73Q9NVV2 129 aa7.26□□□□□ -1.25
SKA1-201ENST00000285116 CCKP06307 115 aa7.25□□□□□ -1.25
SKA1-201ENST00000285116 CCL18P55774 89 aa7.25□□□□□ -1.25
SKA1-201ENST00000285116 ATP5EP2Q5VTU8 51 aa7.25□□□□□ -1.25
SKA1-201ENST00000285116 ORMDL1Q9P0S3 153 aa7.25□□□□□ -1.25
SKA1-201ENST00000285116 TRBV6-8A0A0A6YYG3 113 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 NDUFC2O95298 119 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 IGLV1-51P01701 117 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 LINC00612Q8N6U2 182 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 FHL2Q14192 279 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 Q5XG85 94 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 TOMM7Q9P0U1 55 aa7.24□□□□□ -1.25
SKA1-201ENST00000285116 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
SKA1-201ENST00000285116 GHRHP01286 108 aa7.23□□□□□ -1.25
SKA1-201ENST00000285116 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
SKA1-201ENST00000285116 KRTAP1-1Q07627 177 aa7.22□□□□□ -1.25
SKA1-201ENST00000285116 TRGV2A0A075B6R0 118 aa7.22□□□□□ -1.25
SKA1-201ENST00000285116 PAX4O43316 350 aa7.22□□□□□ -1.25
SKA1-201ENST00000285116 SLPIP03973 132 aa7.22□□□□□ -1.25
SKA1-201ENST00000285116 SS18Q15532 418 aa7.22□□□□□ -1.25
SKA1-201ENST00000285116 A0A1B0GUV1 79 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 LINC00167Q96N53 147 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 IGLV4-60A0A075B6I1 120 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 TRGV4A0A0C4DH28 118 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 HILS1P60008 231 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 LYPD5Q6UWN5 251 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.26
SKA1-201ENST00000285116 LOC100131303A0A0U1RQF7 123 aa7.2□□□□□ -1.26
SKA1-201ENST00000285116 RNASE1P07998 156 aaKnown RBP7.2□□□□□ -1.26
SKA1-201ENST00000285116 SPATA3Q8NHX4 192 aa7.2□□□□□ -1.26
SKA1-201ENST00000285116 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
SKA1-201ENST00000285116 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
SKA1-201ENST00000285116 PFN2P35080 140 aa7.19□□□□□ -1.26
SKA1-201ENST00000285116 Q8IZM0 81 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms