RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 IGKV3D-7A0A0C4DH55 119 aa11.76□□□□□ -0.53
RTN1-201ENST00000267484 OVOL2Q9BRP0 275 aa11.76□□□□□ -0.53
RTN1-201ENST00000267484 IMUPQ9GZP8 106 aa11.76□□□□□ -0.53
RTN1-201ENST00000267484 LRRC75A-AS1Q8N1F1 130 aa11.75□□□□□ -0.53
RTN1-201ENST00000267484 TMEM86BQ8N661 226 aa11.75□□□□□ -0.53
RTN1-201ENST00000267484 IBA57-AS1B1ANH7 110 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 IGLV1-51P01701 117 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 GYPEP15421 78 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 ITPR2Q14571 2701 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 ZNF843Q8N446 348 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 HIVEP2P31629 2446 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 VWFP04275 2813 aa11.74□□□□□ -0.53
RTN1-201ENST00000267484 C9orf153Q5TBE3 101 aa11.73□□□□□ -0.53
RTN1-201ENST00000267484 Q8N3U1 123 aa11.73□□□□□ -0.53
RTN1-201ENST00000267484 LINC00846Q9NV44 126 aa11.73□□□□□ -0.53
RTN1-201ENST00000267484 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
RTN1-201ENST00000267484 A0A087WVE0 104 aa11.71□□□□□ -0.54
RTN1-201ENST00000267484 IGLV10-54A0A075B6I4 117 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 PPDPFQ9H3Y8 114 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 H0YGX0 51 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 C3orf22Q8N5N4 141 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 NOTCH2Q04721 2471 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 TENM4Q6N022 2769 aa11.7□□□□□ -0.54
RTN1-201ENST00000267484 DEFB4AO15263 64 aa11.69□□□□□ -0.54
RTN1-201ENST00000267484 C9orf116Q5BN46 136 aaPredicted RBP11.69□□□□□ -0.54
RTN1-201ENST00000267484 ANK3Q12955 4377 aaKnown RBP11.68□□□□□ -0.54
RTN1-201ENST00000267484 SS18Q15532 418 aa11.67□□□□□ -0.54
RTN1-201ENST00000267484 CXCL5P42830 114 aa11.66□□□□□ -0.54
RTN1-201ENST00000267484 CMC4P56277 68 aaPredicted RBP11.66□□□□□ -0.54
RTN1-201ENST00000267484 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
RTN1-201ENST00000267484 LINC00269Q8N2A0 174 aa11.65□□□□□ -0.54
RTN1-201ENST00000267484 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.54
RTN1-201ENST00000267484 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
RTN1-201ENST00000267484 UQCRQO14949 82 aa11.64□□□□□ -0.55
RTN1-201ENST00000267484 OBSCN-AS1Q96MR7 158 aa11.64□□□□□ -0.55
RTN1-201ENST00000267484 PDZD2O15018 2839 aa11.64□□□□□ -0.55
RTN1-201ENST00000267484 CYSTM1Q9H1C7 97 aa11.64□□□□□ -0.55
RTN1-201ENST00000267484 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
RTN1-201ENST00000267484 LINC00482Q8N8I6 264 aa11.63□□□□□ -0.55
RTN1-201ENST00000267484 Q8NDZ9 215 aa11.63□□□□□ -0.55
RTN1-201ENST00000267484 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
RTN1-201ENST00000267484 C2orf48Q96LS8 159 aa11.63□□□□□ -0.55
RTN1-201ENST00000267484 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
RTN1-201ENST00000267484 TMEM126AQ9H061 195 aa11.63□□□□□ -0.55
RTN1-201ENST00000267484 LY6G6DO95868 133 aa11.62□□□□□ -0.55
RTN1-201ENST00000267484 SPATA3Q8NHX4 192 aa11.62□□□□□ -0.55
RTN1-201ENST00000267484 Q8IZM0 81 aa11.62□□□□□ -0.55
RTN1-201ENST00000267484 WFDC9Q8NEX5 89 aa11.62□□□□□ -0.55
RTN1-201ENST00000267484 COX7CP15954 63 aa11.61□□□□□ -0.55
RTN1-201ENST00000267484 hADV29S1A0JD25 119 aa11.61□□□□□ -0.55
RTN1-201ENST00000267484 A0A1B0GX51 115 aa11.6□□□□□ -0.55
RTN1-201ENST00000267484 X6R8D5 127 aa11.6□□□□□ -0.55
RTN1-201ENST00000267484 HIST1H4AP62805 103 aaKnown RBP11.6□□□□□ -0.55
RTN1-201ENST00000267484 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
RTN1-201ENST00000267484 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
RTN1-201ENST00000267484 KRTAP10-3P60369 221 aa11.59□□□□□ -0.55
RTN1-201ENST00000267484 KIR2DL5BQ8NHK3 375 aa11.59□□□□□ -0.55
RTN1-201ENST00000267484 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
RTN1-201ENST00000267484 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
RTN1-201ENST00000267484 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
RTN1-201ENST00000267484 A0A1B0GUV1 79 aa11.58□□□□□ -0.55
RTN1-201ENST00000267484 Q8N814 137 aa11.58□□□□□ -0.55
RTN1-201ENST00000267484 PRO0255Q9UI72 69 aa11.58□□□□□ -0.55
RTN1-201ENST00000267484 C16orf95Q9H693 158 aa11.58□□□□□ -0.56
RTN1-201ENST00000267484 HILS1P60008 231 aa11.58□□□□□ -0.56
RTN1-201ENST00000267484 Q6JHZ5 121 aa11.58□□□□□ -0.56
RTN1-201ENST00000267484 RPL18AQ02543 176 aaKnown RBP11.57□□□□□ -0.56
RTN1-201ENST00000267484 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
RTN1-201ENST00000267484 SMR3AQ99954 134 aa11.57□□□□□ -0.56
RTN1-201ENST00000267484 FASNP49327 2511 aaKnown RBP11.57□□□□□ -0.56
RTN1-201ENST00000267484 ATOX1O00244 68 aa11.57□□□□□ -0.56
RTN1-201ENST00000267484 C6orf99Q4VX62 202 aa11.57□□□□□ -0.56
RTN1-201ENST00000267484 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
RTN1-201ENST00000267484 LINC00612Q8N6U2 182 aa11.56□□□□□ -0.56
RTN1-201ENST00000267484 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
RTN1-201ENST00000267484 CCKP06307 115 aa11.55□□□□□ -0.56
RTN1-201ENST00000267484 REG3AQ06141 175 aa11.55□□□□□ -0.56
RTN1-201ENST00000267484 TENM1Q9UKZ4 2725 aa11.54□□□□□ -0.56
RTN1-201ENST00000267484 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
RTN1-201ENST00000267484 USP17L23D6RBM5 183 aa11.53□□□□□ -0.56
RTN1-201ENST00000267484 UNQ6190/PRO20217Q6UXQ8 127 aa11.53□□□□□ -0.56
RTN1-201ENST00000267484 HTN3P15516 51 aa11.53□□□□□ -0.56
RTN1-201ENST00000267484 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
RTN1-201ENST00000267484 FAM19A1Q7Z5A9 133 aa11.51□□□□□ -0.57
RTN1-201ENST00000267484 HELZ2Q9BYK8 2649 aaKnown RBP11.51□□□□□ -0.57
RTN1-201ENST00000267484 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
RTN1-201ENST00000267484 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
RTN1-201ENST00000267484 CRYGAP11844 174 aa11.5□□□□□ -0.57
RTN1-201ENST00000267484 CELA1Q9UNI1 258 aa11.5□□□□□ -0.57
RTN1-201ENST00000267484 TRAV23DV6A0A075B6W5 121 aa11.49□□□□□ -0.57
RTN1-201ENST00000267484 TMEM256-PLSCR3K7ERE1 68 aa11.49□□□□□ -0.57
RTN1-201ENST00000267484 ENHOQ6UWT2 76 aa11.49□□□□□ -0.57
RTN1-201ENST00000267484 TRRAPQ9Y4A5 3859 aa11.49□□□□□ -0.57
RTN1-201ENST00000267484 M0R2N4 97 aa11.48□□□□□ -0.57
RTN1-201ENST00000267484 NDUFC2O95298 119 aa11.48□□□□□ -0.57
RTN1-201ENST00000267484 JMJD7-PLA2G4BH0Y9G9 81 aa11.47□□□□□ -0.57
RTN1-201ENST00000267484 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
RTN1-201ENST00000267484 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
RTN1-201ENST00000267484 DAD1P61803 113 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms