RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 UBE2WQ96B02 151 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 PRO0255Q9UI72 69 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 C11orf68Q9H3H3 251 aaKnown RBP8.96□□□□□ -0.97
CPSF6-201ENST00000266679 H3BT86 120 aa8.96□□□□□ -0.98
CPSF6-201ENST00000266679 LINC01600Q96MT4 127 aa8.96□□□□□ -0.98
CPSF6-201ENST00000266679 A0A087WZ39 114 aa8.95□□□□□ -0.98
CPSF6-201ENST00000266679 PAX4O43316 350 aa8.95□□□□□ -0.98
CPSF6-201ENST00000266679 XCL1P47992 114 aa8.95□□□□□ -0.98
CPSF6-201ENST00000266679 LINC00158P58513 81 aa8.95□□□□□ -0.98
CPSF6-201ENST00000266679 LYRM9A8MSI8 78 aa8.95□□□□□ -0.98
CPSF6-201ENST00000266679 COX7A2LO14548 114 aa8.95□□□□□ -0.98
CPSF6-201ENST00000266679 NBEAL2Q6ZNJ1 2754 aa8.94□□□□□ -0.98
CPSF6-201ENST00000266679 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
CPSF6-201ENST00000266679 APOC4P55056 127 aa8.93□□□□□ -0.98
CPSF6-201ENST00000266679 DNAH3Q8TD57 4116 aa8.93□□□□□ -0.98
CPSF6-201ENST00000266679 PFN2P35080 140 aa8.93□□□□□ -0.98
CPSF6-201ENST00000266679 SS18Q15532 418 aa8.93□□□□□ -0.98
CPSF6-201ENST00000266679 CRPP02741 224 aa8.92□□□□□ -0.98
CPSF6-201ENST00000266679 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
CPSF6-201ENST00000266679 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
CPSF6-201ENST00000266679 DAD1P61803 113 aa8.92□□□□□ -0.98
CPSF6-201ENST00000266679 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
CPSF6-201ENST00000266679 CELA1Q9UNI1 258 aa8.92□□□□□ -0.98
CPSF6-201ENST00000266679 A0A1B0GUV1 79 aa8.91□□□□□ -0.98
CPSF6-201ENST00000266679 TRAV13-2A0A0B4J235 113 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 LINC00337Q8N6G1 96 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 IGKV2-28A0A075B6P5 120 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 IBA57-AS1B1ANH7 110 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 IGKV2D-28P01615 120 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 CCL18P55774 89 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 Q8N3U1 123 aa8.9□□□□□ -0.98
CPSF6-201ENST00000266679 HTN3P15516 51 aa8.89□□□□□ -0.99
CPSF6-201ENST00000266679 LINC00269Q8N2A0 174 aa8.89□□□□□ -0.99
CPSF6-201ENST00000266679 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
CPSF6-201ENST00000266679 TRAV26-1A0A087WT03 109 aa8.88□□□□□ -0.99
CPSF6-201ENST00000266679 Q8NAQ8 132 aa8.88□□□□□ -0.99
CPSF6-201ENST00000266679 PRB2P02812 416 aaPredicted RBP8.88□□□□□ -0.99
CPSF6-201ENST00000266679 IGLV10-54A0A075B6I4 117 aa8.86□□□□□ -0.99
CPSF6-201ENST00000266679 ANGP03950 147 aaKnown RBP8.86□□□□□ -0.99
CPSF6-201ENST00000266679 ATP5G1P05496 136 aa8.86□□□□□ -0.99
CPSF6-201ENST00000266679 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
CPSF6-201ENST00000266679 Q8IZM0 81 aa8.86□□□□□ -0.99
CPSF6-201ENST00000266679 MIFP14174 115 aa8.86□□□□□ -0.99
CPSF6-201ENST00000266679 TRACP01848 142 aa8.85□□□□□ -0.99
CPSF6-201ENST00000266679 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
CPSF6-201ENST00000266679 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
CPSF6-201ENST00000266679 CHCHD10Q8WYQ3 142 aaPredicted RBP8.85□□□□□ -0.99
CPSF6-201ENST00000266679 CKS1BP61024 79 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 DEFB121Q5J5C9 76 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 SPART-AS1P0CW21 52 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 REG3AQ06141 175 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 CD164L2Q6UWJ8 174 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 OR13C6PQ8NH95 151 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 Q9HAA7 133 aa8.84□□□□□ -0.99
CPSF6-201ENST00000266679 A0A1B0GV72 72 aa8.83□□□□□ -1
CPSF6-201ENST00000266679 SNCGO76070 127 aa8.83□□□□□ -1
CPSF6-201ENST00000266679 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
CPSF6-201ENST00000266679 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
CPSF6-201ENST00000266679 CFAP161Q6P656 301 aa8.82□□□□□ -1
CPSF6-201ENST00000266679 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
CPSF6-201ENST00000266679 COL7A1Q02388 2944 aa8.82□□□□□ -1
CPSF6-201ENST00000266679 A0A087WYN8 130 aa8.81□□□□□ -1
CPSF6-201ENST00000266679 MALP21145 153 aa8.81□□□□□ -1
CPSF6-201ENST00000266679 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
CPSF6-201ENST00000266679 TTC32Q5I0X7 151 aa8.81□□□□□ -1
CPSF6-201ENST00000266679 WFDC9Q8NEX5 89 aa8.81□□□□□ -1
CPSF6-201ENST00000266679 KIAA0087Q14695 138 aa8.81□□□□□ -1
CPSF6-201ENST00000266679 C22orf24Q9Y442 160 aa8.8□□□□□ -1
CPSF6-201ENST00000266679 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
CPSF6-201ENST00000266679 LELP1Q5T871 98 aa8.79□□□□□ -1
CPSF6-201ENST00000266679 DNAL4O96015 105 aa8.78□□□□□ -1
CPSF6-201ENST00000266679 C9orf116Q5BN46 136 aaPredicted RBP8.78□□□□□ -1
CPSF6-201ENST00000266679 RETNQ9HD89 108 aa8.78□□□□□ -1
CPSF6-201ENST00000266679 CXCL5P42830 114 aa8.78□□□□□ -1
CPSF6-201ENST00000266679 GAGE2BQ13066 116 aa8.78□□□□□ -1
CPSF6-201ENST00000266679 GAGE2EQ4V326 116 aa8.78□□□□□ -1
CPSF6-201ENST00000266679 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
CPSF6-201ENST00000266679 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
CPSF6-201ENST00000266679 H0YGX0 51 aa8.77□□□□□ -1.01
CPSF6-201ENST00000266679 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
CPSF6-201ENST00000266679 LECT2O14960 151 aa8.76□□□□□ -1.01
CPSF6-201ENST00000266679 KPRPQ5T749 579 aaPredicted RBP8.76□□□□□ -1.01
CPSF6-201ENST00000266679 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
CPSF6-201ENST00000266679 C6orf223Q8N319 242 aa8.76□□□□□ -1.01
CPSF6-201ENST00000266679 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
CPSF6-201ENST00000266679 DNAH9Q9NYC9 4486 aa8.75□□□□□ -1.01
CPSF6-201ENST00000266679 KRTAP10-11P60412 298 aa8.75□□□□□ -1.01
CPSF6-201ENST00000266679 COX17Q14061 63 aa8.74□□□□□ -1.01
CPSF6-201ENST00000266679 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
CPSF6-201ENST00000266679 NCR3O14931 201 aa8.74□□□□□ -1.01
CPSF6-201ENST00000266679 SLPIP03973 132 aa8.74□□□□□ -1.01
CPSF6-201ENST00000266679 C10orf25Q5T742 122 aa8.74□□□□□ -1.01
CPSF6-201ENST00000266679 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
CPSF6-201ENST00000266679 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
CPSF6-201ENST00000266679 MRAPQ8TCY5 172 aa8.73□□□□□ -1.01
CPSF6-201ENST00000266679 ACYP1P07311 99 aa8.73□□□□□ -1.01
CPSF6-201ENST00000266679 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
CPSF6-201ENST00000266679 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms