RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 NOTCH3Q9UM47 2321 aa8.67□□□□□ -1.02
BEST3-201ENST00000266661 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
BEST3-201ENST00000266661 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
BEST3-201ENST00000266661 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
BEST3-201ENST00000266661 TRBV7-7A0A0K0K1E9 115 aa8.65□□□□□ -1.02
BEST3-201ENST00000266661 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.02
BEST3-201ENST00000266661 CCL18P55774 89 aa8.65□□□□□ -1.02
BEST3-201ENST00000266661 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
BEST3-201ENST00000266661 ACYP1P07311 99 aa8.64□□□□□ -1.03
BEST3-201ENST00000266661 BAALC-AS2P0C853 105 aa8.64□□□□□ -1.03
BEST3-201ENST00000266661 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
BEST3-201ENST00000266661 SND1-IT1Q9HBX3 110 aa8.64□□□□□ -1.03
BEST3-201ENST00000266661 CHCHD5Q9BSY4 110 aa8.64□□□□□ -1.03
BEST3-201ENST00000266661 C3orf56Q8N813 242 aa8.63□□□□□ -1.03
BEST3-201ENST00000266661 X6R8D5 127 aa8.63□□□□□ -1.03
BEST3-201ENST00000266661 A0A1B0GUV1 79 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 CRPP02741 224 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 TOMM7Q9P0U1 55 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 IGKV3OR2-268A0A0C4DH90 116 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 LINC00158P58513 81 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
BEST3-201ENST00000266661 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
BEST3-201ENST00000266661 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
BEST3-201ENST00000266661 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
BEST3-201ENST00000266661 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
BEST3-201ENST00000266661 GYPEP15421 78 aa8.6□□□□□ -1.03
BEST3-201ENST00000266661 MALP21145 153 aa8.59□□□□□ -1.03
BEST3-201ENST00000266661 A0A087WYN8 130 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 H0YGX0 51 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 OBSCN-AS1Q96MR7 158 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 Q9HAA7 133 aa8.58□□□□□ -1.04
BEST3-201ENST00000266661 Q8IZM0 81 aa8.57□□□□□ -1.04
BEST3-201ENST00000266661 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
BEST3-201ENST00000266661 KIAA0087Q14695 138 aa8.57□□□□□ -1.04
BEST3-201ENST00000266661 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
BEST3-201ENST00000266661 CCDC179H3BU77 68 aa8.56□□□□□ -1.04
BEST3-201ENST00000266661 PFN2P35080 140 aa8.56□□□□□ -1.04
BEST3-201ENST00000266661 SS18Q15532 418 aa8.55□□□□□ -1.04
BEST3-201ENST00000266661 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
BEST3-201ENST00000266661 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
BEST3-201ENST00000266661 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
BEST3-201ENST00000266661 XCL1P47992 114 aa8.55□□□□□ -1.04
BEST3-201ENST00000266661 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
BEST3-201ENST00000266661 NANOS2P60321 138 aaKnown RBP8.54□□□□□ -1.04
BEST3-201ENST00000266661 B5MCH6 92 aa8.53□□□□□ -1.04
BEST3-201ENST00000266661 NBEAL1Q6ZS30 2694 aa8.53□□□□□ -1.04
BEST3-201ENST00000266661 PAX4O43316 350 aa8.53□□□□□ -1.04
BEST3-201ENST00000266661 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
BEST3-201ENST00000266661 MGAM2Q2M2H8 2515 aa8.52□□□□□ -1.05
BEST3-201ENST00000266661 ATP5G1P05496 136 aa8.52□□□□□ -1.05
BEST3-201ENST00000266661 IGHV4-28A0A0C4DH34 117 aa8.51□□□□□ -1.05
BEST3-201ENST00000266661 CD164L2Q6UWJ8 174 aa8.51□□□□□ -1.05
BEST3-201ENST00000266661 LECT2O14960 151 aa8.51□□□□□ -1.05
BEST3-201ENST00000266661 NDUFC2O95298 119 aa8.51□□□□□ -1.05
BEST3-201ENST00000266661 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
BEST3-201ENST00000266661 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
BEST3-201ENST00000266661 A0A096LPF7 62 aa8.5□□□□□ -1.05
BEST3-201ENST00000266661 CXCL5P42830 114 aa8.5□□□□□ -1.05
BEST3-201ENST00000266661 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
BEST3-201ENST00000266661 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
BEST3-201ENST00000266661 DNAL4O96015 105 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 COX17Q14061 63 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 Q8N3U1 123 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 SS18L2Q9UHA2 77 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 C9orf66Q5T8R8 295 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 GAGE2AQ6NT46 116 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 OR13C6PQ8NH95 151 aa8.49□□□□□ -1.05
BEST3-201ENST00000266661 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
BEST3-201ENST00000266661 A0A1B0GX51 115 aa8.48□□□□□ -1.05
BEST3-201ENST00000266661 FAM236AA0A1B0GUQ0 79 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 FAM236BA0A1B0GV22 79 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 PRR3P79522 188 aaKnown RBP8.47□□□□□ -1.05
BEST3-201ENST00000266661 Q8NDZ9 215 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 SLPIP03973 132 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 REG3AQ06141 175 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 Q8NAQ8 132 aa8.47□□□□□ -1.05
BEST3-201ENST00000266661 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.06
BEST3-201ENST00000266661 DEFB135Q30KP9 77 aa8.46□□□□□ -1.06
BEST3-201ENST00000266661 DEFB4AO15263 64 aa8.45□□□□□ -1.06
BEST3-201ENST00000266661 CELA1Q9UNI1 258 aa8.45□□□□□ -1.06
BEST3-201ENST00000266661 NCR3O14931 201 aa8.45□□□□□ -1.06
BEST3-201ENST00000266661 LINC00846Q9NV44 126 aa8.45□□□□□ -1.06
BEST3-201ENST00000266661 ORMDL1Q9P0S3 153 aa8.45□□□□□ -1.06
BEST3-201ENST00000266661 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
BEST3-201ENST00000266661 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
BEST3-201ENST00000266661 Q8N814 137 aa8.44□□□□□ -1.06
BEST3-201ENST00000266661 APOC4P55056 127 aa8.43□□□□□ -1.06
BEST3-201ENST00000266661 DAD1P61803 113 aa8.43□□□□□ -1.06
BEST3-201ENST00000266661 C9orf116Q5BN46 136 aaPredicted RBP8.43□□□□□ -1.06
BEST3-201ENST00000266661 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
BEST3-201ENST00000266661 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
BEST3-201ENST00000266661 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms