RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 GEMIN7Q9H840 131 aaKnown RBP9.88□□□□□ -0.83
USE1-201ENST00000263897 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
USE1-201ENST00000263897 CKS1BP61024 79 aa9.87□□□□□ -0.83
USE1-201ENST00000263897 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
USE1-201ENST00000263897 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
USE1-201ENST00000263897 C1orf137Q5JT78 98 aa9.86□□□□□ -0.83
USE1-201ENST00000263897 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
USE1-201ENST00000263897 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
USE1-201ENST00000263897 HMCN2Q8NDA2 5059 aa9.85□□□□□ -0.83
USE1-201ENST00000263897 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
USE1-201ENST00000263897 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
USE1-201ENST00000263897 FA2HQ7L5A8 372 aa9.84□□□□□ -0.83
USE1-201ENST00000263897 KRTAP11-1Q8IUC1 163 aa9.84□□□□□ -0.83
USE1-201ENST00000263897 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
USE1-201ENST00000263897 LINC00469Q8N7U9 141 aa9.83□□□□□ -0.84
USE1-201ENST00000263897 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
USE1-201ENST00000263897 SMCO4Q9NRQ5 59 aa9.82□□□□□ -0.84
USE1-201ENST00000263897 IGLV5-45A0A087WSX0 123 aa9.81□□□□□ -0.84
USE1-201ENST00000263897 SMIM1B2RUZ4 78 aa9.81□□□□□ -0.84
USE1-201ENST00000263897 F8VRH5 84 aa9.81□□□□□ -0.84
USE1-201ENST00000263897 M0QXV9 152 aa9.81□□□□□ -0.84
USE1-201ENST00000263897 PMVKQ15126 192 aa9.81□□□□□ -0.84
USE1-201ENST00000263897 PDZD11Q5EBL8 140 aa9.81□□□□□ -0.84
USE1-201ENST00000263897 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
USE1-201ENST00000263897 TNXBP22105 4242 aa9.79□□□□□ -0.84
USE1-201ENST00000263897 APOC3P02656 99 aa9.79□□□□□ -0.84
USE1-201ENST00000263897 CXCL5P42830 114 aa9.79□□□□□ -0.84
USE1-201ENST00000263897 UBE2BP63146 152 aa9.79□□□□□ -0.84
USE1-201ENST00000263897 ODF1Q14990 250 aa9.79□□□□□ -0.84
USE1-201ENST00000263897 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
USE1-201ENST00000263897 LINC00614P0C842 121 aa9.78□□□□□ -0.84
USE1-201ENST00000263897 C18orf32Q8TCD1 76 aa9.78□□□□□ -0.84
USE1-201ENST00000263897 COX7B2Q8TF08 81 aa9.78□□□□□ -0.84
USE1-201ENST00000263897 URB1-AS1Q96HZ7 61 aa9.78□□□□□ -0.84
USE1-201ENST00000263897 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
USE1-201ENST00000263897 A0A096LNJ9 63 aa9.77□□□□□ -0.85
USE1-201ENST00000263897 SNAPINO95295 136 aa9.76□□□□□ -0.85
USE1-201ENST00000263897 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
USE1-201ENST00000263897 SVBPQ8N300 66 aa9.76□□□□□ -0.85
USE1-201ENST00000263897 C22orf24Q9Y442 160 aa9.76□□□□□ -0.85
USE1-201ENST00000263897 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
USE1-201ENST00000263897 H0Y9J4 135 aa9.74□□□□□ -0.85
USE1-201ENST00000263897 H3BRM9 83 aa9.74□□□□□ -0.85
USE1-201ENST00000263897 NDUFA6P56556 154 aa9.74□□□□□ -0.85
USE1-201ENST00000263897 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
USE1-201ENST00000263897 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
USE1-201ENST00000263897 HBDP02042 147 aa9.72□□□□□ -0.85
USE1-201ENST00000263897 RAB5BP61020 215 aa9.72□□□□□ -0.85
USE1-201ENST00000263897 PMCHL1Q16048 86 aa9.72□□□□□ -0.85
USE1-201ENST00000263897 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
USE1-201ENST00000263897 IGLV5-39A0A0G2JS06 123 aa9.71□□□□□ -0.86
USE1-201ENST00000263897 ZNF22P17026 224 aaPredicted RBP9.7□□□□□ -0.86
USE1-201ENST00000263897 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
USE1-201ENST00000263897 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
USE1-201ENST00000263897 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
USE1-201ENST00000263897 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
USE1-201ENST00000263897 NUPR1O60356 82 aa9.69□□□□□ -0.86
USE1-201ENST00000263897 ATP5LO75964 103 aa9.69□□□□□ -0.86
USE1-201ENST00000263897 ZNF861PO60384 105 aa9.68□□□□□ -0.86
USE1-201ENST00000263897 KRTAP1-4P0C5Y4 121 aa9.68□□□□□ -0.86
USE1-201ENST00000263897 BAGE3Q86Y29 109 aa9.68□□□□□ -0.86
USE1-201ENST00000263897 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
USE1-201ENST00000263897 IGLV1-50A0A075B6I6 118 aa9.66□□□□□ -0.86
USE1-201ENST00000263897 IGLV5-37A0A075B6J1 123 aa9.65□□□□□ -0.86
USE1-201ENST00000263897 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
USE1-201ENST00000263897 RPL37AP8A6NKH3 93 aa9.64□□□□□ -0.87
USE1-201ENST00000263897 PFN2P35080 140 aa9.64□□□□□ -0.87
USE1-201ENST00000263897 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
USE1-201ENST00000263897 CHCHD1Q96BP2 118 aaKnown RBP9.64□□□□□ -0.87
USE1-201ENST00000263897 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
USE1-201ENST00000263897 GAGE10A6NGK3 116 aa9.62□□□□□ -0.87
USE1-201ENST00000263897 BCE1O60756 84 aa9.62□□□□□ -0.87
USE1-201ENST00000263897 COX17Q14061 63 aa9.62□□□□□ -0.87
USE1-201ENST00000263897 NKAPP1Q8N9T2 125 aa9.62□□□□□ -0.87
USE1-201ENST00000263897 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
USE1-201ENST00000263897 RPL28P46779 137 aaKnown RBP9.61□□□□□ -0.87
USE1-201ENST00000263897 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
USE1-201ENST00000263897 ZNF625Q96I27 306 aaPredicted RBP9.61□□□□□ -0.87
USE1-201ENST00000263897 TRAV12-1A0A0B4J245 112 aa9.6□□□□□ -0.87
USE1-201ENST00000263897 RPL13AP40429 203 aaKnown RBP9.6□□□□□ -0.87
USE1-201ENST00000263897 CBLN2Q8IUK8 224 aa9.6□□□□□ -0.87
USE1-201ENST00000263897 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
USE1-201ENST00000263897 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
USE1-201ENST00000263897 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
USE1-201ENST00000263897 SCO1O75880 301 aa9.57□□□□□ -0.88
USE1-201ENST00000263897 VPREB1P12018 145 aa9.57□□□□□ -0.88
USE1-201ENST00000263897 LRP2P98164 4655 aa9.57□□□□□ -0.88
USE1-201ENST00000263897 FAM19A2Q8N3H0 131 aa9.57□□□□□ -0.88
USE1-201ENST00000263897 HSBP1O75506 76 aa9.56□□□□□ -0.88
USE1-201ENST00000263897 TRGC2P03986 189 aa9.56□□□□□ -0.88
USE1-201ENST00000263897 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
USE1-201ENST00000263897 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
USE1-201ENST00000263897 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
USE1-201ENST00000263897 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
USE1-201ENST00000263897 UBE2AP49459 152 aa9.54□□□□□ -0.88
USE1-201ENST00000263897 LINC00158P58513 81 aa9.54□□□□□ -0.88
USE1-201ENST00000263897 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
USE1-201ENST00000263897 Q8NDZ9 215 aa9.53□□□□□ -0.88
USE1-201ENST00000263897 A0A087X002 238 aa9.51□□□□□ -0.89
USE1-201ENST00000263897 A0A0U1RRA0 63 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms