RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DNAL4O96015 105 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 SPATA3Q8NHX4 192 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 CSDC2Q9Y534 153 aaKnown RBP6.38□□□□□ -1.39
MSH4-201ENST00000263187 HIVEP1P15822 2718 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 NCR3O14931 201 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 HERV-K104P63124 156 aa6.38□□□□□ -1.39
MSH4-201ENST00000263187 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
MSH4-201ENST00000263187 IGHV3OR16-9A0A0B4J2B5 98 aa6.37□□□□□ -1.39
MSH4-201ENST00000263187 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
MSH4-201ENST00000263187 IGKV3D-7A0A0C4DH55 119 aa6.37□□□□□ -1.39
MSH4-201ENST00000263187 MALP21145 153 aa6.37□□□□□ -1.39
MSH4-201ENST00000263187 CSNK1G2-AS1Q8NCQ2 148 aa6.37□□□□□ -1.39
MSH4-201ENST00000263187 TRAV13-2A0A0B4J235 113 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 TRBV6-4A0A1B0GX49 114 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 HTN3P15516 51 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 SDIM1Q6ZPB5 146 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 LINC00959A0A1B0GUT2 108 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 IGLV1-51P01701 117 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
MSH4-201ENST00000263187 PF4P02776 101 aa6.35□□□□□ -1.39
MSH4-201ENST00000263187 TRACP01848 142 aa6.35□□□□□ -1.39
MSH4-201ENST00000263187 DEFB121Q5J5C9 76 aa6.35□□□□□ -1.39
MSH4-201ENST00000263187 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
MSH4-201ENST00000263187 DEFB135Q30KP9 77 aa6.34□□□□□ -1.39
MSH4-201ENST00000263187 FAM19A3Q7Z5A8 133 aa6.34□□□□□ -1.39
MSH4-201ENST00000263187 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
MSH4-201ENST00000263187 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
MSH4-201ENST00000263187 A0A087WVE0 104 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 A0A087WZ39 114 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 Q6Q795 121 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 KRTAP10-3P60369 221 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 FAM222AQ5U5X8 452 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 TMEM86BQ8N661 226 aa6.33□□□□□ -1.4
MSH4-201ENST00000263187 ANGP03950 147 aaKnown RBP6.32□□□□□ -1.4
MSH4-201ENST00000263187 OVOL2Q9BRP0 275 aa6.32□□□□□ -1.4
MSH4-201ENST00000263187 KLK5Q9Y337 293 aaPredicted RBP6.32□□□□□ -1.4
MSH4-201ENST00000263187 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
MSH4-201ENST00000263187 WFDC9Q8NEX5 89 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 SS18Q15532 418 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 TRBV7-7A0A0K0K1E9 115 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 IBA57-AS1B1ANH7 110 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 LINC00846Q9NV44 126 aa6.31□□□□□ -1.4
MSH4-201ENST00000263187 CXCL5P42830 114 aa6.3□□□□□ -1.4
MSH4-201ENST00000263187 ACYP1P07311 99 aa6.3□□□□□ -1.4
MSH4-201ENST00000263187 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
MSH4-201ENST00000263187 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
MSH4-201ENST00000263187 C9orf153Q5TBE3 101 aa6.29□□□□□ -1.4
MSH4-201ENST00000263187 MRPL23Q16540 153 aaKnown RBP6.29□□□□□ -1.4
MSH4-201ENST00000263187 Q8NDZ9 215 aa6.29□□□□□ -1.4
MSH4-201ENST00000263187 HIST1H4AP62805 103 aaKnown RBP6.28□□□□□ -1.4
MSH4-201ENST00000263187 CHCHD10Q8WYQ3 142 aaPredicted RBP6.28□□□□□ -1.4
MSH4-201ENST00000263187 X6R8D5 127 aa6.28□□□□□ -1.4
MSH4-201ENST00000263187 FBN1P35555 2871 aaKnown RBP6.28□□□□□ -1.4
MSH4-201ENST00000263187 C10orf25Q5T742 122 aa6.28□□□□□ -1.4
MSH4-201ENST00000263187 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
MSH4-201ENST00000263187 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
MSH4-201ENST00000263187 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
MSH4-201ENST00000263187 CMC4P56277 68 aaPredicted RBP6.27□□□□□ -1.41
MSH4-201ENST00000263187 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
MSH4-201ENST00000263187 H0YGX0 51 aa6.26□□□□□ -1.41
MSH4-201ENST00000263187 REG3AQ06141 175 aa6.26□□□□□ -1.41
MSH4-201ENST00000263187 UNQ6190/PRO20217Q6UXQ8 127 aa6.26□□□□□ -1.41
MSH4-201ENST00000263187 C6orf99Q4VX62 202 aa6.26□□□□□ -1.41
MSH4-201ENST00000263187 ORMDL1Q9P0S3 153 aa6.26□□□□□ -1.41
MSH4-201ENST00000263187 HILS1P60008 231 aa6.26□□□□□ -1.41
MSH4-201ENST00000263187 NANOS2P60321 138 aaKnown RBP6.26□□□□□ -1.41
MSH4-201ENST00000263187 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 KLK12Q9UKR0 248 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 IGHV4-28A0A0C4DH34 117 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 DAD1P61803 113 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 XAGE1AQ9HD64 81 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 MAST4O15021 2626 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 STAB1Q9NY15 2570 aa6.25□□□□□ -1.41
MSH4-201ENST00000263187 hADV29S1A0JD25 119 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 C16orf95Q9H693 158 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 A0A1B0GX51 115 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 Q8IZM0 81 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 LOC107984640A0A0U1RRK4 108 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 RPL18AQ02543 176 aaKnown RBP6.24□□□□□ -1.41
MSH4-201ENST00000263187 KRTAP21-3Q3LHN1 58 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
MSH4-201ENST00000263187 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
MSH4-201ENST00000263187 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
MSH4-201ENST00000263187 Q8N814 137 aa6.23□□□□□ -1.41
MSH4-201ENST00000263187 F8P00451 2351 aa6.23□□□□□ -1.41
MSH4-201ENST00000263187 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
MSH4-201ENST00000263187 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
MSH4-201ENST00000263187 INAFM1C9JVW0 142 aa6.22□□□□□ -1.41
MSH4-201ENST00000263187 TRAV23DV6A0A075B6W5 121 aa6.22□□□□□ -1.41
MSH4-201ENST00000263187 A0A1B0GUV1 79 aa6.22□□□□□ -1.41
MSH4-201ENST00000263187 SPAG11BQ08648 103 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms