RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ICOSQ9Y6W8 199 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 A0A0J9YXY3 114 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 PAX4O43316 350 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 TRBV7-7A0A0K0K1E9 115 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 PRB2P02812 416 aaPredicted RBP9.47□□□□□ -0.89
VMP1-201ENST00000262291 DAND5Q8N907 189 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.89
VMP1-201ENST00000262291 Q8N3U1 123 aa9.46□□□□□ -0.89
VMP1-201ENST00000262291 C3orf22Q8N5N4 141 aa9.46□□□□□ -0.89
VMP1-201ENST00000262291 SMCR5Q8TEV8 140 aa9.46□□□□□ -0.89
VMP1-201ENST00000262291 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.46□□□□□ -0.9
VMP1-201ENST00000262291 F5H768 121 aa9.46□□□□□ -0.9
VMP1-201ENST00000262291 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
VMP1-201ENST00000262291 PRO0255Q9UI72 69 aa9.46□□□□□ -0.9
VMP1-201ENST00000262291 ANK2Q01484 3957 aa9.45□□□□□ -0.9
VMP1-201ENST00000262291 CMYA5Q8N3K9 4069 aa9.45□□□□□ -0.9
VMP1-201ENST00000262291 TENM3Q9P273 2699 aa9.45□□□□□ -0.9
VMP1-201ENST00000262291 LYRM9A8MSI8 78 aa9.44□□□□□ -0.9
VMP1-201ENST00000262291 TIRAPP58753 221 aa9.44□□□□□ -0.9
VMP1-201ENST00000262291 H3BT86 120 aa9.43□□□□□ -0.9
VMP1-201ENST00000262291 SMIM1B2RUZ4 78 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 WIPF1O43516 503 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 CYSTM1Q9H1C7 97 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 J3KT08 172 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 COX6CP09669 75 aa9.42□□□□□ -0.9
VMP1-201ENST00000262291 MIFP14174 115 aa9.41□□□□□ -0.9
VMP1-201ENST00000262291 LITAFQ99732 161 aa9.41□□□□□ -0.9
VMP1-201ENST00000262291 Q9H8V8 135 aa9.41□□□□□ -0.9
VMP1-201ENST00000262291 UQCRQO14949 82 aa9.41□□□□□ -0.9
VMP1-201ENST00000262291 TOMM7Q9P0U1 55 aa9.41□□□□□ -0.9
VMP1-201ENST00000262291 SPART-AS1P0CW21 52 aa9.4□□□□□ -0.9
VMP1-201ENST00000262291 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
VMP1-201ENST00000262291 hADV29S1A0JD25 119 aa9.4□□□□□ -0.9
VMP1-201ENST00000262291 LST1O00453 97 aa9.4□□□□□ -0.9
VMP1-201ENST00000262291 ATP5G1P05496 136 aa9.4□□□□□ -0.9
VMP1-201ENST00000262291 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.91
VMP1-201ENST00000262291 LINC01600Q96MT4 127 aa9.4□□□□□ -0.91
VMP1-201ENST00000262291 GAGE2AQ6NT46 116 aa9.39□□□□□ -0.91
VMP1-201ENST00000262291 C11orf68Q9H3H3 251 aaKnown RBP9.39□□□□□ -0.91
VMP1-201ENST00000262291 XCL1P47992 114 aa9.39□□□□□ -0.91
VMP1-201ENST00000262291 NBEAL1Q6ZS30 2694 aa9.38□□□□□ -0.91
VMP1-201ENST00000262291 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
VMP1-201ENST00000262291 IGLV10-54A0A075B6I4 117 aa9.37□□□□□ -0.91
VMP1-201ENST00000262291 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
VMP1-201ENST00000262291 NDUFA1O15239 70 aa9.36□□□□□ -0.91
VMP1-201ENST00000262291 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
VMP1-201ENST00000262291 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
VMP1-201ENST00000262291 LINC00269Q8N2A0 174 aa9.35□□□□□ -0.91
VMP1-201ENST00000262291 COX7CP15954 63 aa9.35□□□□□ -0.91
VMP1-201ENST00000262291 EGFEM1PQ0D2K5 195 aa9.34□□□□□ -0.91
VMP1-201ENST00000262291 MIAQ16674 131 aa9.34□□□□□ -0.91
VMP1-201ENST00000262291 DSCR8Q96T75 97 aa9.34□□□□□ -0.91
VMP1-201ENST00000262291 IMUPQ9GZP8 106 aa9.34□□□□□ -0.91
VMP1-201ENST00000262291 ANGP03950 147 aaKnown RBP9.34□□□□□ -0.91
VMP1-201ENST00000262291 LINC00643Q86TS7 51 aa9.34□□□□□ -0.91
VMP1-201ENST00000262291 MGAM2Q2M2H8 2515 aa9.34□□□□□ -0.91
VMP1-201ENST00000262291 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 Q6ZTC4 211 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 MRAPQ8TCY5 172 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 COX7B2Q8TF08 81 aa9.33□□□□□ -0.92
VMP1-201ENST00000262291 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
VMP1-201ENST00000262291 OXTP01178 125 aa9.32□□□□□ -0.92
VMP1-201ENST00000262291 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
VMP1-201ENST00000262291 A0A1B0GX51 115 aa9.32□□□□□ -0.92
VMP1-201ENST00000262291 NANOS2P60321 138 aaKnown RBP9.32□□□□□ -0.92
VMP1-201ENST00000262291 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
VMP1-201ENST00000262291 SPANXCQ9NY87 97 aa9.32□□□□□ -0.92
VMP1-201ENST00000262291 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
VMP1-201ENST00000262291 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
VMP1-201ENST00000262291 ACYP1P07311 99 aa9.3□□□□□ -0.92
VMP1-201ENST00000262291 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
VMP1-201ENST00000262291 SS18Q15532 418 aa9.3□□□□□ -0.92
VMP1-201ENST00000262291 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 A0A087WVE0 104 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 TRACP01848 142 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 CRYGAP11844 174 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 PFN2P35080 140 aa9.29□□□□□ -0.92
VMP1-201ENST00000262291 A0A087WZ39 114 aa9.28□□□□□ -0.92
VMP1-201ENST00000262291 REG3AQ06141 175 aa9.28□□□□□ -0.92
VMP1-201ENST00000262291 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
VMP1-201ENST00000262291 Q9HAA7 133 aa9.28□□□□□ -0.92
VMP1-201ENST00000262291 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
VMP1-201ENST00000262291 BAALC-AS2P0C853 105 aa9.27□□□□□ -0.92
VMP1-201ENST00000262291 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.92
VMP1-201ENST00000262291 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
VMP1-201ENST00000262291 DNAH3Q8TD57 4116 aa9.27□□□□□ -0.93
VMP1-201ENST00000262291 TIMM17BO60830 172 aa9.26□□□□□ -0.93
VMP1-201ENST00000262291 LINC00158P58513 81 aa9.26□□□□□ -0.93
VMP1-201ENST00000262291 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
VMP1-201ENST00000262291 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
VMP1-201ENST00000262291 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
VMP1-201ENST00000262291 FAM218AQ96MZ4 157 aa9.25□□□□□ -0.93
VMP1-201ENST00000262291 LELP1Q5T871 98 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms