RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 DNAJC30Q96LL9 226 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 CDC42SE2Q9NRR3 84 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 SETXQ7Z333 2677 aaKnown RBP7.22□□□□□ -1.25
PALB2-201ENST00000261584 FAM19A4Q96LR4 140 aa7.22□□□□□ -1.25
PALB2-201ENST00000261584 Q8N3U1 123 aa7.22□□□□□ -1.25
PALB2-201ENST00000261584 DSCR9P59020 149 aa7.22□□□□□ -1.25
PALB2-201ENST00000261584 BBC3Q96PG8 261 aaPredicted RBP7.22□□□□□ -1.25
PALB2-201ENST00000261584 LITAFQ99732 161 aa7.22□□□□□ -1.25
PALB2-201ENST00000261584 ACYP1P07311 99 aa7.21□□□□□ -1.25
PALB2-201ENST00000261584 LINC00846Q9NV44 126 aa7.21□□□□□ -1.25
PALB2-201ENST00000261584 SMCR5Q8TEV8 140 aa7.21□□□□□ -1.26
PALB2-201ENST00000261584 HIVEP1P15822 2718 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 DNAJC9-AS1A6NH13 148 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 ATOX1O00244 68 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 UQCRQO14949 82 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 IGHV4-31P0DP07 118 aa7.2□□□□□ -1.26
PALB2-201ENST00000261584 RBM3P98179 157 aaKnown RBP7.2□□□□□ -1.26
PALB2-201ENST00000261584 BAHCC1Q9P281 2608 aa7.19□□□□□ -1.26
PALB2-201ENST00000261584 Q6YL49 198 aa7.19□□□□□ -1.26
PALB2-201ENST00000261584 KIR2DL5BQ8NHK3 375 aa7.19□□□□□ -1.26
PALB2-201ENST00000261584 APCP25054 2843 aa7.19□□□□□ -1.26
PALB2-201ENST00000261584 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
PALB2-201ENST00000261584 TRBV10-1A0A0K0K1A3 114 aa7.19□□□□□ -1.26
PALB2-201ENST00000261584 SMR3AQ99954 134 aa7.19□□□□□ -1.26
PALB2-201ENST00000261584 TRBV6-8A0A0A6YYG3 113 aa7.18□□□□□ -1.26
PALB2-201ENST00000261584 FAM222AQ5U5X8 452 aa7.18□□□□□ -1.26
PALB2-201ENST00000261584 H0YGX0 51 aa7.18□□□□□ -1.26
PALB2-201ENST00000261584 SBSPONQ8IVN8 264 aa7.18□□□□□ -1.26
PALB2-201ENST00000261584 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
PALB2-201ENST00000261584 J3KT08 172 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 ZNF561-AS1K7EIQ3 104 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 HRCT1Q6UXD1 115 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 MRAPQ8TCY5 172 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 C4orf3Q8WVX3 66 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 C6orf223Q8N319 242 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 UPK3BQ9BT76 320 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 COL6A5A8TX70 2615 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 DEFB113Q30KQ7 82 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 C16orf74Q96GX8 76 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 ITPR2Q14571 2701 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 LRRC75A-AS1Q8N1F1 130 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 DPH3Q96FX2 82 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 OVOL2Q9BRP0 275 aa7.17□□□□□ -1.26
PALB2-201ENST00000261584 C11orf72Q8NBR9 251 aa7.16□□□□□ -1.26
PALB2-201ENST00000261584 CHCHD10Q8WYQ3 142 aaPredicted RBP7.16□□□□□ -1.26
PALB2-201ENST00000261584 LINC00959A0A1B0GUT2 108 aa7.16□□□□□ -1.26
PALB2-201ENST00000261584 Q6ZQY7 126 aa7.15□□□□□ -1.26
PALB2-201ENST00000261584 J3QLI3 93 aa7.15□□□□□ -1.26
PALB2-201ENST00000261584 COX7CP15954 63 aa7.15□□□□□ -1.26
PALB2-201ENST00000261584 FAM19A5Q7Z5A7 132 aaPredicted RBP7.15□□□□□ -1.26
PALB2-201ENST00000261584 UNQ6190/PRO20217Q6UXQ8 127 aa7.15□□□□□ -1.27
PALB2-201ENST00000261584 C1orf43Q9BWL3 253 aa7.15□□□□□ -1.27
PALB2-201ENST00000261584 VPS13CQ709C8 3753 aa7.14□□□□□ -1.27
PALB2-201ENST00000261584 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
PALB2-201ENST00000261584 FAM110AQ9BQ89 295 aa7.14□□□□□ -1.27
PALB2-201ENST00000261584 REG3AQ06141 175 aa7.14□□□□□ -1.27
PALB2-201ENST00000261584 IGKV2D-24A0A075B6R9 120 aa7.13□□□□□ -1.27
PALB2-201ENST00000261584 LRCOL1A6NCL2 159 aa7.13□□□□□ -1.27
PALB2-201ENST00000261584 C3orf84H3BNL1 204 aa7.13□□□□□ -1.27
PALB2-201ENST00000261584 PRR4Q16378 134 aa7.13□□□□□ -1.27
PALB2-201ENST00000261584 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
PALB2-201ENST00000261584 Q8N9L7 120 aa7.13□□□□□ -1.27
PALB2-201ENST00000261584 TIMM17BO60830 172 aa7.12□□□□□ -1.27
PALB2-201ENST00000261584 CAMK2N2Q96S95 79 aa7.12□□□□□ -1.27
PALB2-201ENST00000261584 PKIGQ9Y2B9 76 aa7.12□□□□□ -1.27
PALB2-201ENST00000261584 Q6Q795 121 aa7.11□□□□□ -1.27
PALB2-201ENST00000261584 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
PALB2-201ENST00000261584 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
PALB2-201ENST00000261584 IBA57-AS1B1ANH7 110 aa7.11□□□□□ -1.27
PALB2-201ENST00000261584 LINC01006Q8NI28 216 aa7.11□□□□□ -1.27
PALB2-201ENST00000261584 PRO0255Q9UI72 69 aa7.11□□□□□ -1.27
PALB2-201ENST00000261584 SERP2Q8N6R1 65 aa7.1□□□□□ -1.27
PALB2-201ENST00000261584 FAM240AA0A1B0GVK7 77 aa7.1□□□□□ -1.27
PALB2-201ENST00000261584 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
PALB2-201ENST00000261584 PRORYQ9H606 182 aa7.1□□□□□ -1.27
PALB2-201ENST00000261584 IGLV5-39A0A0G2JS06 123 aa7.09□□□□□ -1.27
PALB2-201ENST00000261584 TMEM256-PLSCR3K7ERE1 68 aa7.09□□□□□ -1.27
PALB2-201ENST00000261584 RPL28P46779 137 aaKnown RBP7.09□□□□□ -1.27
PALB2-201ENST00000261584 FAM104AQ969W3 186 aa7.09□□□□□ -1.27
PALB2-201ENST00000261584 A0A096LNI7 61 aa7.08□□□□□ -1.28
PALB2-201ENST00000261584 FHL2Q14192 279 aa7.08□□□□□ -1.28
PALB2-201ENST00000261584 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
PALB2-201ENST00000261584 CELA1Q9UNI1 258 aa7.08□□□□□ -1.28
PALB2-201ENST00000261584 CR1P17927 2039 aa7.07□□□□□ -1.28
PALB2-201ENST00000261584 TRBV6-4A0A1B0GX49 114 aa7.07□□□□□ -1.28
PALB2-201ENST00000261584 JMJD7-PLA2G4BH0Y9G9 81 aa7.07□□□□□ -1.28
PALB2-201ENST00000261584 TRBV7-7A0A0K0K1E9 115 aa7.07□□□□□ -1.28
PALB2-201ENST00000261584 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
PALB2-201ENST00000261584 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
PALB2-201ENST00000261584 STAB1Q9NY15 2570 aa7.06□□□□□ -1.28
PALB2-201ENST00000261584 CYSRT1A8MQ03 144 aa7.06□□□□□ -1.28
PALB2-201ENST00000261584 BEAN1Q3B7T3 259 aa7.06□□□□□ -1.28
PALB2-201ENST00000261584 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.06□□□□□ -1.28
PALB2-201ENST00000261584 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
PALB2-201ENST00000261584 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
PALB2-201ENST00000261584 DEFB121Q5J5C9 76 aa7.06□□□□□ -1.28
PALB2-201ENST00000261584 RMI2Q96E14 147 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms