RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 HILS1P60008 231 aa11.16□□□□□ -0.62
LMNB1-201ENST00000261366 RPL18AQ02543 176 aaKnown RBP11.16□□□□□ -0.62
LMNB1-201ENST00000261366 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
LMNB1-201ENST00000261366 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
LMNB1-201ENST00000261366 A0A096LPF7 62 aa11.16□□□□□ -0.62
LMNB1-201ENST00000261366 ACANP16112 2415 aa11.15□□□□□ -0.62
LMNB1-201ENST00000261366 ITPR3Q14573 2671 aa11.15□□□□□ -0.62
LMNB1-201ENST00000261366 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
LMNB1-201ENST00000261366 DSCR8Q96T75 97 aa11.14□□□□□ -0.63
LMNB1-201ENST00000261366 J3KT08 172 aa11.14□□□□□ -0.63
LMNB1-201ENST00000261366 FSHBP01225 129 aa11.14□□□□□ -0.63
LMNB1-201ENST00000261366 IL17DQ8TAD2 202 aa11.14□□□□□ -0.63
LMNB1-201ENST00000261366 CR1P17927 2039 aa11.13□□□□□ -0.63
LMNB1-201ENST00000261366 IGHV3OR16-9A0A0B4J2B5 98 aa11.13□□□□□ -0.63
LMNB1-201ENST00000261366 USP17L23D6RBM5 183 aa11.13□□□□□ -0.63
LMNB1-201ENST00000261366 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
LMNB1-201ENST00000261366 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
LMNB1-201ENST00000261366 H0YGX0 51 aa11.13□□□□□ -0.63
LMNB1-201ENST00000261366 CRYGAP11844 174 aa11.12□□□□□ -0.63
LMNB1-201ENST00000261366 FLNAP21333 2647 aaKnown RBP11.11□□□□□ -0.63
LMNB1-201ENST00000261366 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
LMNB1-201ENST00000261366 TRAV23DV6A0A075B6W5 121 aa11.11□□□□□ -0.63
LMNB1-201ENST00000261366 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
LMNB1-201ENST00000261366 WFDC11Q8NEX6 87 aa11.1□□□□□ -0.63
LMNB1-201ENST00000261366 TRBV6-8A0A0A6YYG3 113 aa11.1□□□□□ -0.63
LMNB1-201ENST00000261366 IBA57-AS1B1ANH7 110 aa11.1□□□□□ -0.63
LMNB1-201ENST00000261366 Q6JHZ5 121 aa11.1□□□□□ -0.63
LMNB1-201ENST00000261366 KRTAP1-3Q8IUG1 177 aa11.1□□□□□ -0.63
LMNB1-201ENST00000261366 GIG44P09565 113 aaPredicted RBP11.09□□□□□ -0.63
LMNB1-201ENST00000261366 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
LMNB1-201ENST00000261366 SS18Q15532 418 aa11.09□□□□□ -0.63
LMNB1-201ENST00000261366 SERP2Q8N6R1 65 aa11.09□□□□□ -0.63
LMNB1-201ENST00000261366 CCL24O00175 119 aa11.08□□□□□ -0.64
LMNB1-201ENST00000261366 FAM19A1Q7Z5A9 133 aa11.08□□□□□ -0.64
LMNB1-201ENST00000261366 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
LMNB1-201ENST00000261366 ITPR2Q14571 2701 aa11.08□□□□□ -0.64
LMNB1-201ENST00000261366 IGLV10-54A0A075B6I4 117 aa11.07□□□□□ -0.64
LMNB1-201ENST00000261366 A0A087WZ39 114 aa11.07□□□□□ -0.64
LMNB1-201ENST00000261366 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
LMNB1-201ENST00000261366 C9orf116Q5BN46 136 aaPredicted RBP11.07□□□□□ -0.64
LMNB1-201ENST00000261366 HELZ2Q9BYK8 2649 aaKnown RBP11.07□□□□□ -0.64
LMNB1-201ENST00000261366 ENHOQ6UWT2 76 aa11.06□□□□□ -0.64
LMNB1-201ENST00000261366 OBSCN-AS1Q96MR7 158 aa11.05□□□□□ -0.64
LMNB1-201ENST00000261366 SMIM9A6NGZ8 99 aa11.05□□□□□ -0.64
LMNB1-201ENST00000261366 C16orf74Q96GX8 76 aa11.05□□□□□ -0.64
LMNB1-201ENST00000261366 FHL2Q14192 279 aa11.04□□□□□ -0.64
LMNB1-201ENST00000261366 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
LMNB1-201ENST00000261366 GHRHP01286 108 aa11.04□□□□□ -0.64
LMNB1-201ENST00000261366 OXTP01178 125 aa11.03□□□□□ -0.64
LMNB1-201ENST00000261366 CCKP06307 115 aa11.03□□□□□ -0.64
LMNB1-201ENST00000261366 Q8N3U1 123 aa11.03□□□□□ -0.64
LMNB1-201ENST00000261366 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
LMNB1-201ENST00000261366 ESM1Q9NQ30 184 aa11.03□□□□□ -0.64
LMNB1-201ENST00000261366 GYPEP15421 78 aa11.02□□□□□ -0.65
LMNB1-201ENST00000261366 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
LMNB1-201ENST00000261366 Q8N814 137 aa11.01□□□□□ -0.65
LMNB1-201ENST00000261366 NANOS2P60321 138 aaKnown RBP11.01□□□□□ -0.65
LMNB1-201ENST00000261366 HIVEP2P31629 2446 aa11□□□□□ -0.65
LMNB1-201ENST00000261366 C6orf99Q4VX62 202 aa11□□□□□ -0.65
LMNB1-201ENST00000261366 PDZD2O15018 2839 aa11□□□□□ -0.65
LMNB1-201ENST00000261366 C20orf197Q8N268 126 aa11□□□□□ -0.65
LMNB1-201ENST00000261366 LINC00269Q8N2A0 174 aa10.99□□□□□ -0.65
LMNB1-201ENST00000261366 TRAV25A0A0B4J276 109 aa10.99□□□□□ -0.65
LMNB1-201ENST00000261366 TMEM258P61165 79 aa10.99□□□□□ -0.65
LMNB1-201ENST00000261366 C4orf26Q17RF5 130 aa10.98□□□□□ -0.65
LMNB1-201ENST00000261366 DNAJC9-AS1A6NH13 148 aa10.98□□□□□ -0.65
LMNB1-201ENST00000261366 Q8NDZ9 215 aa10.98□□□□□ -0.65
LMNB1-201ENST00000261366 DEFB4AO15263 64 aa10.97□□□□□ -0.65
LMNB1-201ENST00000261366 LY6G6DO95868 133 aa10.97□□□□□ -0.65
LMNB1-201ENST00000261366 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
LMNB1-201ENST00000261366 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
LMNB1-201ENST00000261366 M0R2N4 97 aa10.96□□□□□ -0.65
LMNB1-201ENST00000261366 S100A7L2Q5SY68 101 aa10.96□□□□□ -0.66
LMNB1-201ENST00000261366 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.66
LMNB1-201ENST00000261366 UNC79Q9P2D8 2635 aa10.96□□□□□ -0.66
LMNB1-201ENST00000261366 SPATA3Q8NHX4 192 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 JMJD7-PLA2G4BH0Y9G9 81 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 TMEM256-PLSCR3K7ERE1 68 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 HAMPP81172 84 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 HRCT1Q6UXD1 115 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 UBL5Q9BZL1 73 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 CSNK1G2-AS1Q8NCQ2 148 aa10.95□□□□□ -0.66
LMNB1-201ENST00000261366 FASNP49327 2511 aaKnown RBP10.93□□□□□ -0.66
LMNB1-201ENST00000261366 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
LMNB1-201ENST00000261366 Q8IZM0 81 aa10.93□□□□□ -0.66
LMNB1-201ENST00000261366 C6orf223Q8N319 242 aa10.93□□□□□ -0.66
LMNB1-201ENST00000261366 HECTD1Q9ULT8 2610 aa10.93□□□□□ -0.66
LMNB1-201ENST00000261366 RPS28P62857 69 aaKnown RBP10.92□□□□□ -0.66
LMNB1-201ENST00000261366 VWFP04275 2813 aa10.92□□□□□ -0.66
LMNB1-201ENST00000261366 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
LMNB1-201ENST00000261366 SCXQ7RTU7 201 aa10.91□□□□□ -0.66
LMNB1-201ENST00000261366 J3QKU1 62 aa10.91□□□□□ -0.66
LMNB1-201ENST00000261366 CHCHD10Q8WYQ3 142 aaPredicted RBP10.91□□□□□ -0.66
LMNB1-201ENST00000261366 C10orf25Q5T742 122 aa10.9□□□□□ -0.67
LMNB1-201ENST00000261366 RBM3P98179 157 aaKnown RBP10.89□□□□□ -0.67
LMNB1-201ENST00000261366 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
LMNB1-201ENST00000261366 KRTAP1-1Q07627 177 aa10.89□□□□□ -0.67
LMNB1-201ENST00000261366 ANK3Q12955 4377 aaKnown RBP10.88□□□□□ -0.67
LMNB1-201ENST00000261366 KIAA0087Q14695 138 aa10.88□□□□□ -0.67
LMNB1-201ENST00000261366 UNQ6190/PRO20217Q6UXQ8 127 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms