RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 IGKV3D-7A0A0C4DH55 119 aa7.59□□□□□ -1.19
CHRNA1-201ENST00000261007 TRBV6-4A0A1B0GX49 114 aa7.59□□□□□ -1.19
CHRNA1-201ENST00000261007 RPL35AP18077 110 aaKnown RBP7.59□□□□□ -1.19
CHRNA1-201ENST00000261007 SMR3AQ99954 134 aa7.59□□□□□ -1.19
CHRNA1-201ENST00000261007 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
CHRNA1-201ENST00000261007 TLN2Q9Y4G6 2542 aa7.59□□□□□ -1.2
CHRNA1-201ENST00000261007 USP17L23D6RBM5 183 aa7.59□□□□□ -1.2
CHRNA1-201ENST00000261007 C9orf66Q5T8R8 295 aa7.59□□□□□ -1.2
CHRNA1-201ENST00000261007 LINC01561Q8N1V8 128 aa7.59□□□□□ -1.2
CHRNA1-201ENST00000261007 PDZD2O15018 2839 aa7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 CCDC168Q8NDH2 2452 aa7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 TRGV2A0A075B6R0 118 aa7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 C9orf129Q5T035 196 aaKnown RBP7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 CYSTM1Q9H1C7 97 aa7.58□□□□□ -1.2
CHRNA1-201ENST00000261007 PLAC8L1A1L4L8 177 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 CCKP06307 115 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 CCL18P55774 89 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 KRTAP10-3P60369 221 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 TMEM243Q9BU79 118 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 WFDC10AQ9H1F0 79 aa7.57□□□□□ -1.2
CHRNA1-201ENST00000261007 UBE2L6O14933 153 aa7.56□□□□□ -1.2
CHRNA1-201ENST00000261007 LECT2O14960 151 aa7.56□□□□□ -1.2
CHRNA1-201ENST00000261007 LINC00158P58513 81 aa7.56□□□□□ -1.2
CHRNA1-201ENST00000261007 KIR2DL5BQ8NHK3 375 aa7.56□□□□□ -1.2
CHRNA1-201ENST00000261007 ORMDL1Q9P0S3 153 aa7.56□□□□□ -1.2
CHRNA1-201ENST00000261007 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
CHRNA1-201ENST00000261007 HIVEP2P31629 2446 aa7.55□□□□□ -1.2
CHRNA1-201ENST00000261007 TRGV4A0A0C4DH28 118 aa7.55□□□□□ -1.2
CHRNA1-201ENST00000261007 INAFM1C9JVW0 142 aa7.55□□□□□ -1.2
CHRNA1-201ENST00000261007 JMJD7-PLA2G4BH0Y9G9 81 aa7.55□□□□□ -1.2
CHRNA1-201ENST00000261007 NDUFC2O95298 119 aa7.55□□□□□ -1.2
CHRNA1-201ENST00000261007 A0A087WVE0 104 aa7.54□□□□□ -1.2
CHRNA1-201ENST00000261007 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
CHRNA1-201ENST00000261007 NCR3O14931 201 aa7.54□□□□□ -1.2
CHRNA1-201ENST00000261007 LYPD5Q6UWN5 251 aa7.54□□□□□ -1.2
CHRNA1-201ENST00000261007 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
CHRNA1-201ENST00000261007 TENM4Q6N022 2769 aa7.53□□□□□ -1.2
CHRNA1-201ENST00000261007 LINC00612Q8N6U2 182 aa7.53□□□□□ -1.2
CHRNA1-201ENST00000261007 BCE1O60756 84 aa7.52□□□□□ -1.21
CHRNA1-201ENST00000261007 SS18Q15532 418 aa7.52□□□□□ -1.21
CHRNA1-201ENST00000261007 CHD6Q8TD26 2715 aa7.52□□□□□ -1.21
CHRNA1-201ENST00000261007 IGHV3OR16-9A0A0B4J2B5 98 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 A0A087WZ39 114 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 PAX4O43316 350 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 OXTP01178 125 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 APOC4P55056 127 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 FHL2Q14192 279 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 DSCR8Q96T75 97 aa7.51□□□□□ -1.21
CHRNA1-201ENST00000261007 TMEM256-PLSCR3K7ERE1 68 aa7.5□□□□□ -1.21
CHRNA1-201ENST00000261007 UNC79Q9P2D8 2635 aa7.5□□□□□ -1.21
CHRNA1-201ENST00000261007 ACANP16112 2415 aa7.5□□□□□ -1.21
CHRNA1-201ENST00000261007 LYRM9A8MSI8 78 aa7.5□□□□□ -1.21
CHRNA1-201ENST00000261007 GHRHP01286 108 aa7.5□□□□□ -1.21
CHRNA1-201ENST00000261007 Q5XG85 94 aa7.5□□□□□ -1.21
CHRNA1-201ENST00000261007 ZNF469Q96JG9 3925 aaPredicted RBP7.49□□□□□ -1.21
CHRNA1-201ENST00000261007 SLPIP03973 132 aa7.49□□□□□ -1.21
CHRNA1-201ENST00000261007 TRBV6-8A0A0A6YYG3 113 aa7.48□□□□□ -1.21
CHRNA1-201ENST00000261007 PFN2P35080 140 aa7.48□□□□□ -1.21
CHRNA1-201ENST00000261007 Q8N814 137 aa7.48□□□□□ -1.21
CHRNA1-201ENST00000261007 X6R8D5 127 aa7.48□□□□□ -1.21
CHRNA1-201ENST00000261007 HELZ2Q9BYK8 2649 aaKnown RBP7.48□□□□□ -1.21
CHRNA1-201ENST00000261007 UBL5Q9BZL1 73 aa7.47□□□□□ -1.21
CHRNA1-201ENST00000261007 WFDC9Q8NEX5 89 aa7.46□□□□□ -1.21
CHRNA1-201ENST00000261007 PRO0255Q9UI72 69 aa7.46□□□□□ -1.21
CHRNA1-201ENST00000261007 LOC100131303A0A0U1RQF7 123 aa7.46□□□□□ -1.22
CHRNA1-201ENST00000261007 EPM2AB3EWF7 344 aa7.46□□□□□ -1.22
CHRNA1-201ENST00000261007 DEFB130BP0DP73 79 aa7.46□□□□□ -1.22
CHRNA1-201ENST00000261007 DEFB130AP0DP74 79 aa7.46□□□□□ -1.22
CHRNA1-201ENST00000261007 C4orf26Q17RF5 130 aa7.46□□□□□ -1.22
CHRNA1-201ENST00000261007 ANK3Q12955 4377 aaKnown RBP7.45□□□□□ -1.22
CHRNA1-201ENST00000261007 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
CHRNA1-201ENST00000261007 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
CHRNA1-201ENST00000261007 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
CHRNA1-201ENST00000261007 FASNP49327 2511 aaKnown RBP7.45□□□□□ -1.22
CHRNA1-201ENST00000261007 MIFP14174 115 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 XCL1P47992 114 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 Q8IZM0 81 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 MTORP42345 2549 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 NBPF19A0A087WUL8 3843 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 FAM236DA0A1B0GTK5 79 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 FAM236CP0DP71 79 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 NANOS2P60321 138 aaKnown RBP7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 SERP1Q9Y6X1 66 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
CHRNA1-201ENST00000261007 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
CHRNA1-201ENST00000261007 LINC00959A0A1B0GUT2 108 aa7.43□□□□□ -1.22
CHRNA1-201ENST00000261007 GYPEP15421 78 aa7.43□□□□□ -1.22
CHRNA1-201ENST00000261007 HRCT1Q6UXD1 115 aa7.43□□□□□ -1.22
CHRNA1-201ENST00000261007 A0A1B0GUV1 79 aa7.42□□□□□ -1.22
CHRNA1-201ENST00000261007 COX17Q14061 63 aa7.42□□□□□ -1.22
CHRNA1-201ENST00000261007 C20orf197Q8N268 126 aa7.42□□□□□ -1.22
CHRNA1-201ENST00000261007 LOC110117498A0A087WWA1 95 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms