RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 IGLV5-45A0A087WSX0 123 aa12.38□□□□□ -0.43
CFC1-201ENST00000259216 SEC11AP67812 179 aa12.38□□□□□ -0.43
CFC1-201ENST00000259216 ODF1Q14990 250 aa12.38□□□□□ -0.43
CFC1-201ENST00000259216 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
CFC1-201ENST00000259216 PACRGQ96M98 296 aaPredicted RBP12.37□□□□□ -0.43
CFC1-201ENST00000259216 SMIM1B2RUZ4 78 aa12.36□□□□□ -0.43
CFC1-201ENST00000259216 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
CFC1-201ENST00000259216 REG3GQ6UW15 175 aa12.36□□□□□ -0.43
CFC1-201ENST00000259216 URB1-AS1Q96HZ7 61 aa12.36□□□□□ -0.43
CFC1-201ENST00000259216 GEMIN7Q9H840 131 aaKnown RBP12.36□□□□□ -0.43
CFC1-201ENST00000259216 TOMM7Q9P0U1 55 aa12.36□□□□□ -0.43
CFC1-201ENST00000259216 A0A096LNJ9 63 aa12.35□□□□□ -0.43
CFC1-201ENST00000259216 C1orf137Q5JT78 98 aa12.35□□□□□ -0.43
CFC1-201ENST00000259216 CST9LQ9H4G1 147 aa12.35□□□□□ -0.43
CFC1-201ENST00000259216 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
CFC1-201ENST00000259216 LINC01549A6NIU2 74 aa12.34□□□□□ -0.43
CFC1-201ENST00000259216 PRSS2P07478 247 aa12.34□□□□□ -0.43
CFC1-201ENST00000259216 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
CFC1-201ENST00000259216 IGLV7-43P04211 117 aa12.33□□□□□ -0.44
CFC1-201ENST00000259216 CKS1BP61024 79 aa12.33□□□□□ -0.44
CFC1-201ENST00000259216 M0QXV9 152 aa12.32□□□□□ -0.44
CFC1-201ENST00000259216 FA2HQ7L5A8 372 aa12.32□□□□□ -0.44
CFC1-201ENST00000259216 LINC00469Q8N7U9 141 aa12.32□□□□□ -0.44
CFC1-201ENST00000259216 F8VRH5 84 aa12.31□□□□□ -0.44
CFC1-201ENST00000259216 C18orf32Q8TCD1 76 aa12.31□□□□□ -0.44
CFC1-201ENST00000259216 PMVKQ15126 192 aa12.3□□□□□ -0.44
CFC1-201ENST00000259216 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
CFC1-201ENST00000259216 YPEL4Q96NS1 127 aa12.29□□□□□ -0.44
CFC1-201ENST00000259216 APOC3P02656 99 aa12.28□□□□□ -0.44
CFC1-201ENST00000259216 CXCL5P42830 114 aa12.28□□□□□ -0.44
CFC1-201ENST00000259216 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
CFC1-201ENST00000259216 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
CFC1-201ENST00000259216 TRAPPC1Q9Y5R8 145 aa12.27□□□□□ -0.45
CFC1-201ENST00000259216 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
CFC1-201ENST00000259216 SPINK8P0C7L1 97 aa12.25□□□□□ -0.45
CFC1-201ENST00000259216 IGLC3P0DOY3 106 aa12.25□□□□□ -0.45
CFC1-201ENST00000259216 DIRC1Q969H9 104 aa12.25□□□□□ -0.45
CFC1-201ENST00000259216 H0Y9J4 135 aa12.24□□□□□ -0.45
CFC1-201ENST00000259216 SNAPINO95295 136 aa12.24□□□□□ -0.45
CFC1-201ENST00000259216 LINC00614P0C842 121 aa12.24□□□□□ -0.45
CFC1-201ENST00000259216 SVBPQ8N300 66 aa12.24□□□□□ -0.45
CFC1-201ENST00000259216 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
CFC1-201ENST00000259216 UBR4Q5T4S7 5183 aa12.24□□□□□ -0.45
CFC1-201ENST00000259216 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
CFC1-201ENST00000259216 KRTAP1-4P0C5Y4 121 aa12.23□□□□□ -0.45
CFC1-201ENST00000259216 PMCHL1Q16048 86 aa12.23□□□□□ -0.45
CFC1-201ENST00000259216 UBE2BP63146 152 aa12.22□□□□□ -0.45
CFC1-201ENST00000259216 HBDP02042 147 aa12.21□□□□□ -0.45
CFC1-201ENST00000259216 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
CFC1-201ENST00000259216 TP73-AS1Q9UF72 201 aa12.21□□□□□ -0.45
CFC1-201ENST00000259216 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
CFC1-201ENST00000259216 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
CFC1-201ENST00000259216 LRP2P98164 4655 aa12.17□□□□□ -0.46
CFC1-201ENST00000259216 H3BRM9 83 aa12.17□□□□□ -0.46
CFC1-201ENST00000259216 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
CFC1-201ENST00000259216 MRPL55Q7Z7F7 128 aaKnown RBP12.16□□□□□ -0.46
CFC1-201ENST00000259216 IGLV5-37A0A075B6J1 123 aa12.15□□□□□ -0.46
CFC1-201ENST00000259216 ATP5LO75964 103 aa12.15□□□□□ -0.46
CFC1-201ENST00000259216 NDUFA6P56556 154 aa12.15□□□□□ -0.46
CFC1-201ENST00000259216 LBHQ53QV2 105 aaPredicted RBP12.15□□□□□ -0.46
CFC1-201ENST00000259216 ZNF861PO60384 105 aa12.14□□□□□ -0.47
CFC1-201ENST00000259216 RAB5BP61020 215 aa12.14□□□□□ -0.47
CFC1-201ENST00000259216 NUPR1O60356 82 aa12.13□□□□□ -0.47
CFC1-201ENST00000259216 BAGE3Q86Y29 109 aa12.13□□□□□ -0.47
CFC1-201ENST00000259216 LINC00167Q96N53 147 aa12.13□□□□□ -0.47
CFC1-201ENST00000259216 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
CFC1-201ENST00000259216 CBLN2Q8IUK8 224 aa12.11□□□□□ -0.47
CFC1-201ENST00000259216 CHCHD1Q96BP2 118 aaKnown RBP12.1□□□□□ -0.47
CFC1-201ENST00000259216 BCE1O60756 84 aa12.09□□□□□ -0.47
CFC1-201ENST00000259216 ZNF625Q96I27 306 aaPredicted RBP12.09□□□□□ -0.47
CFC1-201ENST00000259216 RPL37AP8A6NKH3 93 aa12.08□□□□□ -0.48
CFC1-201ENST00000259216 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
CFC1-201ENST00000259216 GAGE10A6NGK3 116 aa12.07□□□□□ -0.48
CFC1-201ENST00000259216 PFN2P35080 140 aa12.07□□□□□ -0.48
CFC1-201ENST00000259216 KRTAP13-1Q8IUC0 172 aa12.07□□□□□ -0.48
CFC1-201ENST00000259216 Q8NDZ9 215 aa12.07□□□□□ -0.48
CFC1-201ENST00000259216 SND1-IT1Q9HBX3 110 aa12.07□□□□□ -0.48
CFC1-201ENST00000259216 TRAV12-1A0A0B4J245 112 aa12.06□□□□□ -0.48
CFC1-201ENST00000259216 SCO1O75880 301 aa12.06□□□□□ -0.48
CFC1-201ENST00000259216 VPREB1P12018 145 aa12.06□□□□□ -0.48
CFC1-201ENST00000259216 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
CFC1-201ENST00000259216 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
CFC1-201ENST00000259216 CHTOPQ9Y3Y2 248 aaKnown RBP12.06□□□□□ -0.48
CFC1-201ENST00000259216 LINC00310P59036 64 aa12.05□□□□□ -0.48
CFC1-201ENST00000259216 COX17Q14061 63 aa12.04□□□□□ -0.48
CFC1-201ENST00000259216 TMEM223A0PJW6 202 aa12.03□□□□□ -0.48
CFC1-201ENST00000259216 RPL28P46779 137 aaKnown RBP12.02□□□□□ -0.49
CFC1-201ENST00000259216 FAM19A2Q8N3H0 131 aa12.02□□□□□ -0.49
CFC1-201ENST00000259216 NKAPP1Q8N9T2 125 aa12.02□□□□□ -0.49
CFC1-201ENST00000259216 TRGC2P03986 189 aa12.01□□□□□ -0.49
CFC1-201ENST00000259216 SFTA2Q6UW10 78 aa12.01□□□□□ -0.49
CFC1-201ENST00000259216 RPL13AP40429 203 aaKnown RBP12□□□□□ -0.49
CFC1-201ENST00000259216 SLC7A5P1Q8MH63 180 aa12□□□□□ -0.49
CFC1-201ENST00000259216 A0A087X002 238 aa11.99□□□□□ -0.49
CFC1-201ENST00000259216 HSBP1O75506 76 aa11.98□□□□□ -0.49
CFC1-201ENST00000259216 IGKV2-28A0A075B6P5 120 aa11.97□□□□□ -0.49
CFC1-201ENST00000259216 IGKV2D-28P01615 120 aa11.97□□□□□ -0.49
CFC1-201ENST00000259216 SERF1AO75920 110 aa11.96□□□□□ -0.49
CFC1-201ENST00000259216 COLCA2A8K830 154 aa11.95□□□□□ -0.5
CFC1-201ENST00000259216 TMEM238C9JI98 176 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms