RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SPANXDQ9BXN6 97 aa11.74□□□□□ -0.53
SRSF1-201ENST00000258962 SPANXCQ9NY87 97 aa11.74□□□□□ -0.53
SRSF1-201ENST00000258962 K7EP13 123 aa11.73□□□□□ -0.53
SRSF1-201ENST00000258962 DNAH10OSP0CZ25 163 aa11.73□□□□□ -0.53
SRSF1-201ENST00000258962 IFITM1P13164 125 aa11.73□□□□□ -0.53
SRSF1-201ENST00000258962 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
SRSF1-201ENST00000258962 RAB37Q96AX2 223 aa11.73□□□□□ -0.53
SRSF1-201ENST00000258962 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
SRSF1-201ENST00000258962 ZNF625Q96I27 306 aaPredicted RBP11.73□□□□□ -0.53
SRSF1-201ENST00000258962 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
SRSF1-201ENST00000258962 LITAFQ99732 161 aa11.72□□□□□ -0.53
SRSF1-201ENST00000258962 Q9H8V8 135 aa11.72□□□□□ -0.53
SRSF1-201ENST00000258962 M0R2N4 97 aa11.71□□□□□ -0.53
SRSF1-201ENST00000258962 COX7A2LO14548 114 aa11.71□□□□□ -0.53
SRSF1-201ENST00000258962 CRPP02741 224 aa11.71□□□□□ -0.53
SRSF1-201ENST00000258962 UBE2V1Q13404 147 aa11.71□□□□□ -0.53
SRSF1-201ENST00000258962 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.53
SRSF1-201ENST00000258962 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 H3BUT2 72 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 FABP2P12104 132 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 TOMM7Q9P0U1 55 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 PRSS2P07478 247 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 MIAQ16674 131 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
SRSF1-201ENST00000258962 TRAV8-4A0A0B4J246 113 aa11.69□□□□□ -0.54
SRSF1-201ENST00000258962 KRTAP26-1Q6PEX3 210 aa11.69□□□□□ -0.54
SRSF1-201ENST00000258962 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
SRSF1-201ENST00000258962 A0A1W2PPM0 123 aa11.68□□□□□ -0.54
SRSF1-201ENST00000258962 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
SRSF1-201ENST00000258962 KMT2AQ03164 3969 aa11.68□□□□□ -0.54
SRSF1-201ENST00000258962 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
SRSF1-201ENST00000258962 K7ERJ3 54 aa11.66□□□□□ -0.54
SRSF1-201ENST00000258962 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
SRSF1-201ENST00000258962 Q8IZM0 81 aa11.66□□□□□ -0.54
SRSF1-201ENST00000258962 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
SRSF1-201ENST00000258962 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
SRSF1-201ENST00000258962 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
SRSF1-201ENST00000258962 A0A0B4J2C4 111 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 A4D1N5 150 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 APOMO95445 188 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 MALP21145 153 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 C6orf226Q5I0X4 101 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 Q6ZR54 194 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 PRO1854Q9UHT4 67 aa11.65□□□□□ -0.55
SRSF1-201ENST00000258962 NBDYA0A0U1RRE5 68 aa11.64□□□□□ -0.55
SRSF1-201ENST00000258962 CFC1BP0CG36 223 aa11.63□□□□□ -0.55
SRSF1-201ENST00000258962 CFC1P0CG37 223 aa11.63□□□□□ -0.55
SRSF1-201ENST00000258962 CXCL5P42830 114 aa11.63□□□□□ -0.55
SRSF1-201ENST00000258962 IBA57-AS1B1ANH7 110 aa11.62□□□□□ -0.55
SRSF1-201ENST00000258962 K7EP34 96 aa11.62□□□□□ -0.55
SRSF1-201ENST00000258962 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
SRSF1-201ENST00000258962 PGPEP1Q9NXJ5 209 aa11.62□□□□□ -0.55
SRSF1-201ENST00000258962 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
SRSF1-201ENST00000258962 C1orf134Q5TEV5 83 aa11.61□□□□□ -0.55
SRSF1-201ENST00000258962 C2orf82Q6UX34 121 aa11.61□□□□□ -0.55
SRSF1-201ENST00000258962 DAND5Q8N907 189 aa11.61□□□□□ -0.55
SRSF1-201ENST00000258962 CFAP161Q6P656 301 aa11.6□□□□□ -0.55
SRSF1-201ENST00000258962 LINC00336Q6ZUF6 198 aa11.6□□□□□ -0.55
SRSF1-201ENST00000258962 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
SRSF1-201ENST00000258962 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
SRSF1-201ENST00000258962 Q9HAA7 133 aa11.6□□□□□ -0.55
SRSF1-201ENST00000258962 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
SRSF1-201ENST00000258962 EIF4EBP3O60516 100 aaPredicted RBP11.59□□□□□ -0.55
SRSF1-201ENST00000258962 CKS1BP61024 79 aa11.59□□□□□ -0.55
SRSF1-201ENST00000258962 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
SRSF1-201ENST00000258962 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
SRSF1-201ENST00000258962 NAA38Q9BRA0 125 aaKnown RBP11.59□□□□□ -0.55
SRSF1-201ENST00000258962 ERG28Q9UKR5 140 aa11.59□□□□□ -0.55
SRSF1-201ENST00000258962 IGKV2D-24A0A075B6R9 120 aa11.58□□□□□ -0.56
SRSF1-201ENST00000258962 NPC2P61916 151 aa11.58□□□□□ -0.56
SRSF1-201ENST00000258962 RTL8CO15255 209 aa11.56□□□□□ -0.56
SRSF1-201ENST00000258962 TSPAN13O95857 204 aa11.56□□□□□ -0.56
SRSF1-201ENST00000258962 C6orf223Q8N319 242 aa11.56□□□□□ -0.56
SRSF1-201ENST00000258962 LINC00526Q96FQ7 95 aa11.56□□□□□ -0.56
SRSF1-201ENST00000258962 LINC00158P58513 81 aa11.55□□□□□ -0.56
SRSF1-201ENST00000258962 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
SRSF1-201ENST00000258962 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
SRSF1-201ENST00000258962 KRTAP1-5Q9BYS1 174 aa11.55□□□□□ -0.56
SRSF1-201ENST00000258962 TRBV20-1A0A075B6N2 111 aa11.54□□□□□ -0.56
SRSF1-201ENST00000258962 LOC107984156A0A0G2JMH3 177 aa11.54□□□□□ -0.56
SRSF1-201ENST00000258962 COX17Q14061 63 aa11.54□□□□□ -0.56
SRSF1-201ENST00000258962 ARL17AQ8IVW1 177 aa11.54□□□□□ -0.56
SRSF1-201ENST00000258962 MIR7-3HGQ8N6C7 128 aa11.54□□□□□ -0.56
SRSF1-201ENST00000258962 PFN2P35080 140 aa11.53□□□□□ -0.56
SRSF1-201ENST00000258962 PSMB2P49721 201 aa11.53□□□□□ -0.56
SRSF1-201ENST00000258962 Q1RN00 199 aa11.53□□□□□ -0.56
SRSF1-201ENST00000258962 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
SRSF1-201ENST00000258962 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
SRSF1-201ENST00000258962 NTN5Q8WTR8 489 aaPredicted RBP11.53□□□□□ -0.56
SRSF1-201ENST00000258962 SCGB1C2P0DMR2 95 aa11.52□□□□□ -0.57
SRSF1-201ENST00000258962 UNQ6190/PRO20217Q6UXQ8 127 aa11.52□□□□□ -0.57
SRSF1-201ENST00000258962 COX6CP09669 75 aa11.51□□□□□ -0.57
SRSF1-201ENST00000258962 C9orf116Q5BN46 136 aaPredicted RBP11.5□□□□□ -0.57
SRSF1-201ENST00000258962 RMI2Q96E14 147 aa11.5□□□□□ -0.57
SRSF1-201ENST00000258962 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
SRSF1-201ENST00000258962 TRBV30A0A0K0K1B3 111 aa11.49□□□□□ -0.57
SRSF1-201ENST00000258962 DNAH10Q8IVF4 4471 aa11.48□□□□□ -0.57
SRSF1-201ENST00000258962 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
SRSF1-201ENST00000258962 F8W1H4 67 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms