RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ABCA1O95477 2261 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 A6NDX4 124 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 GPR179Q6PRD1 2367 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 Q6ZTC4 211 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 LINC01006Q8NI28 216 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 WNK2Q9Y3S1 2297 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 Q9BRP9 147 aa4.71□□□□□ -1.65
PDGFRA-201ENST00000257290 CAMK2N2Q96S95 79 aa4.71□□□□□ -1.66
PDGFRA-201ENST00000257290 FAM186AA6NE01 2351 aa4.71□□□□□ -1.66
PDGFRA-201ENST00000257290 SSBP3-AS1Q7Z2R9 100 aa4.71□□□□□ -1.66
PDGFRA-201ENST00000257290 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 ACYP2P14621 99 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 DHRS4-AS1Q9P1J3 65 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 A6NN06 94 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 C1orf229Q6ZS94 237 aaPredicted RBP4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 LINC00476Q8WZB0 136 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 EML5Q05BV3 1969 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 CPAMD8Q8IZJ3 1885 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 PTPRBP23467 1997 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 IGHV4-30-4P0DP06 118 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 IGHV4-31P0DP07 118 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 C4orf3Q8WVX3 66 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 CDC42SE2Q9NRR3 84 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 OBSCN-AS1Q96MR7 158 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 ZNF407Q9C0G0 2248 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 Q8IZM0 81 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 PRR3P79522 188 aaKnown RBP4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 Q6YL49 198 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 COX6A2Q02221 97 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 PRRC2AP48634 2157 aaKnown RBP4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 IGLV10-54A0A075B6I4 117 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 TP53AIP1Q9HCN2 124 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 K7EQG2 157 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 DEFB130BP0DP73 79 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 DEFB130AP0DP74 79 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 PRR9Q5T870 116 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 EP300Q09472 2414 aaPredicted RBP4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 X6R8D5 127 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 CHCHD7Q9BUK0 85 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 PCNX2A6NKB5 2137 aa4.65□□□□□ -1.66
PDGFRA-201ENST00000257290 KPRPQ5T749 579 aaPredicted RBP4.65□□□□□ -1.66
PDGFRA-201ENST00000257290 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.66
PDGFRA-201ENST00000257290 SLURP1P55000 103 aa4.65□□□□□ -1.67
PDGFRA-201ENST00000257290 DEFB1P60022 68 aa4.65□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV5-45A0A087WSX0 123 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 MED13LQ71F56 2210 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 C6orf48Q9UBA6 75 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 NOP10Q9NPE3 64 aaKnown RBP4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 ICE1Q9Y2F5 2266 aa4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 TET2Q6N021 2002 aaPredicted RBP4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 DEFB136Q30KP8 78 aa4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV4-60A0A075B6I1 120 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 KLLNB2CW77 178 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 INAFM1C9JVW0 142 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 PLA2G1BP04054 148 aaKnown RBP4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 DSCAMO60469 2012 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 CACNA1BQ00975 2339 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 IGKV2-28A0A075B6P5 120 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 IGKV2D-28P01615 120 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 PROK1P58294 105 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 C9orf129Q5T035 196 aaKnown RBP4.61□□□□□ -1.67
PDGFRA-201ENST00000257290 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
PDGFRA-201ENST00000257290 C16orf74Q96GX8 76 aa4.61□□□□□ -1.67
PDGFRA-201ENST00000257290 LINC00959A0A1B0GUT2 108 aa4.6□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV9-49A0A0B4J1Y8 123 aa4.6□□□□□ -1.67
PDGFRA-201ENST00000257290 PKDREJQ9NTG1 2253 aa4.6□□□□□ -1.67
PDGFRA-201ENST00000257290 A0A096LPF7 62 aa4.59□□□□□ -1.67
PDGFRA-201ENST00000257290 PCSK5Q92824 1860 aa4.59□□□□□ -1.67
PDGFRA-201ENST00000257290 LY6G6DO95868 133 aa4.59□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV1-40P01703 118 aa4.59□□□□□ -1.68
PDGFRA-201ENST00000257290 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 Q8NAQ8 132 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 LINC00167Q96N53 147 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 A0A087WSZ3 146 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 CNOT1A5YKK6 2376 aaKnown RBP4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 A8MTW9 85 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 Q8NBF4 154 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 CACNA1HO95180 2353 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 ZFHX2Q9C0A1 2572 aaPredicted RBP4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 A0A1W2PPR1 153 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 LINC00315P59091 139 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 ST20-AS1Q8NBB2 130 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 SPTA1P02549 2419 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 RP1L1Q8IWN7 2480 aaPredicted RBP4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 AKAP6Q13023 2319 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 ACACAQ13085 2346 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 OTOGLQ3ZCN5 2332 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 A8MWP4 228 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 SPINK7P58062 85 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms