RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
TRIM47-201ENST00000254816 Q9H8V8 135 aa12.9□□□□□ -0.34
TRIM47-201ENST00000254816 WFDC10BQ8IUB3 73 aa12.9□□□□□ -0.35
TRIM47-201ENST00000254816 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
TRIM47-201ENST00000254816 XCL1P47992 114 aa12.89□□□□□ -0.35
TRIM47-201ENST00000254816 IGHV3OR16-9A0A0B4J2B5 98 aa12.88□□□□□ -0.35
TRIM47-201ENST00000254816 REG3AQ06141 175 aa12.88□□□□□ -0.35
TRIM47-201ENST00000254816 SS18Q15532 418 aa12.88□□□□□ -0.35
TRIM47-201ENST00000254816 C5orf38Q86SI9 138 aa12.88□□□□□ -0.35
TRIM47-201ENST00000254816 IGLV10-54A0A075B6I4 117 aa12.87□□□□□ -0.35
TRIM47-201ENST00000254816 J3QR89 54 aa12.87□□□□□ -0.35
TRIM47-201ENST00000254816 TRIAP1O43715 76 aa12.86□□□□□ -0.35
TRIM47-201ENST00000254816 TIMM17BO60830 172 aa12.86□□□□□ -0.35
TRIM47-201ENST00000254816 KLK12Q9UKR0 248 aa12.86□□□□□ -0.35
TRIM47-201ENST00000254816 FOXI1Q12951 378 aa12.85□□□□□ -0.35
TRIM47-201ENST00000254816 C9JAW5 83 aa12.84□□□□□ -0.35
TRIM47-201ENST00000254816 PRKDCP78527 4128 aaKnown RBP12.83□□□□□ -0.36
TRIM47-201ENST00000254816 A0A087WZ39 114 aa12.83□□□□□ -0.36
TRIM47-201ENST00000254816 GAGE12HA6NDE8 117 aa12.83□□□□□ -0.36
TRIM47-201ENST00000254816 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
TRIM47-201ENST00000254816 CHCHD10Q8WYQ3 142 aaPredicted RBP12.83□□□□□ -0.36
TRIM47-201ENST00000254816 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
TRIM47-201ENST00000254816 ANKRD29Q8N6D5 301 aa12.82□□□□□ -0.36
TRIM47-201ENST00000254816 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
TRIM47-201ENST00000254816 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 SLC25A20O43772 301 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 IFITM1P13164 125 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 TEN1Q86WV5 123 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 LINC00308Q8TCZ7 52 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 STAB2Q8WWQ8 2551 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
TRIM47-201ENST00000254816 MEIG1Q5JSS6 88 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
TRIM47-201ENST00000254816 ATXN8Q156A1 80 aa12.79□□□□□ -0.36
TRIM47-201ENST00000254816 COX7B2Q8TF08 81 aa12.79□□□□□ -0.36
TRIM47-201ENST00000254816 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
TRIM47-201ENST00000254816 PRR34Q9NV39 138 aa12.79□□□□□ -0.36
TRIM47-201ENST00000254816 CD164L2Q6UWJ8 174 aa12.78□□□□□ -0.36
TRIM47-201ENST00000254816 UBE2WQ96B02 151 aa12.78□□□□□ -0.36
TRIM47-201ENST00000254816 LINC01620Q4KN68 170 aa12.78□□□□□ -0.36
TRIM47-201ENST00000254816 PPDPFLQ8WWR9 84 aa12.78□□□□□ -0.36
TRIM47-201ENST00000254816 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.37
TRIM47-201ENST00000254816 CLEC2BQ92478 149 aa12.77□□□□□ -0.37
TRIM47-201ENST00000254816 LINC00588Q9Y4M8 146 aa12.77□□□□□ -0.37
TRIM47-201ENST00000254816 CRPP02741 224 aa12.76□□□□□ -0.37
TRIM47-201ENST00000254816 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
TRIM47-201ENST00000254816 KRTAP21-3Q3LHN1 58 aa12.76□□□□□ -0.37
TRIM47-201ENST00000254816 COX7A2LO14548 114 aa12.74□□□□□ -0.37
TRIM47-201ENST00000254816 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
TRIM47-201ENST00000254816 HERV-K104P63124 156 aa12.73□□□□□ -0.37
TRIM47-201ENST00000254816 LYSTQ99698 3801 aa12.73□□□□□ -0.37
TRIM47-201ENST00000254816 COX6CP09669 75 aa12.73□□□□□ -0.37
TRIM47-201ENST00000254816 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
TRIM47-201ENST00000254816 CSMD3Q7Z407 3707 aa12.72□□□□□ -0.37
TRIM47-201ENST00000254816 MALP21145 153 aa12.72□□□□□ -0.37
TRIM47-201ENST00000254816 DYNC2H1Q8NCM8 4307 aaKnown RBP12.72□□□□□ -0.37
TRIM47-201ENST00000254816 CDIP1Q9H305 208 aa12.72□□□□□ -0.37
TRIM47-201ENST00000254816 CCL18P55774 89 aa12.71□□□□□ -0.37
TRIM47-201ENST00000254816 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
TRIM47-201ENST00000254816 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.38
TRIM47-201ENST00000254816 LINC01561Q8N1V8 128 aa12.7□□□□□ -0.38
TRIM47-201ENST00000254816 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
TRIM47-201ENST00000254816 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
TRIM47-201ENST00000254816 M0QXV9 152 aa12.69□□□□□ -0.38
TRIM47-201ENST00000254816 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
TRIM47-201ENST00000254816 TRAV8-4A0A0B4J246 113 aa12.68□□□□□ -0.38
TRIM47-201ENST00000254816 Q8IZM0 81 aa12.68□□□□□ -0.38
TRIM47-201ENST00000254816 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
TRIM47-201ENST00000254816 LST1O00453 97 aa12.68□□□□□ -0.38
TRIM47-201ENST00000254816 MIR7-3HGQ8N6C7 128 aa12.68□□□□□ -0.38
TRIM47-201ENST00000254816 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
TRIM47-201ENST00000254816 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
TRIM47-201ENST00000254816 LINC00526Q96FQ7 95 aa12.66□□□□□ -0.38
TRIM47-201ENST00000254816 DNAH7Q8WXX0 4024 aa12.66□□□□□ -0.38
TRIM47-201ENST00000254816 KRTAP26-1Q6PEX3 210 aa12.65□□□□□ -0.38
TRIM47-201ENST00000254816 LINC00158P58513 81 aa12.65□□□□□ -0.38
TRIM47-201ENST00000254816 Q9HAA7 133 aa12.65□□□□□ -0.38
TRIM47-201ENST00000254816 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
TRIM47-201ENST00000254816 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
TRIM47-201ENST00000254816 CFAP161Q6P656 301 aa12.64□□□□□ -0.39
TRIM47-201ENST00000254816 PFN2P35080 140 aa12.64□□□□□ -0.39
TRIM47-201ENST00000254816 CKS1BP61024 79 aa12.64□□□□□ -0.39
TRIM47-201ENST00000254816 C6orf223Q8N319 242 aa12.64□□□□□ -0.39
TRIM47-201ENST00000254816 PLECQ15149 4684 aaKnown RBP12.63□□□□□ -0.39
TRIM47-201ENST00000254816 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
TRIM47-201ENST00000254816 XGP55808 180 aa12.63□□□□□ -0.39
TRIM47-201ENST00000254816 MT-ATP8P03928 68 aa12.62□□□□□ -0.39
TRIM47-201ENST00000254816 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
TRIM47-201ENST00000254816 C1orf43Q9BWL3 253 aa12.62□□□□□ -0.39
TRIM47-201ENST00000254816 KLK5Q9Y337 293 aaPredicted RBP12.62□□□□□ -0.39
TRIM47-201ENST00000254816 UPK3BQ9BT76 320 aa12.62□□□□□ -0.39
TRIM47-201ENST00000254816 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
TRIM47-201ENST00000254816 SND1-IT1Q9HBX3 110 aa12.6□□□□□ -0.39
TRIM47-201ENST00000254816 H3BT86 120 aa12.6□□□□□ -0.39
TRIM47-201ENST00000254816 LINC00337Q8N6G1 96 aa12.6□□□□□ -0.39
TRIM47-201ENST00000254816 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
TRIM47-201ENST00000254816 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
TRIM47-201ENST00000254816 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
TRIM47-201ENST00000254816 STARD9Q9P2P6 4700 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms