RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 C15orf53Q8NAA6 179 aa10.99□□□□□ -0.65
RFX1-201ENST00000254325 SMCPP49901 116 aaPredicted RBP10.99□□□□□ -0.65
RFX1-201ENST00000254325 SPATA3Q8NHX4 192 aa10.99□□□□□ -0.65
RFX1-201ENST00000254325 TEX49A0A1B0GTD5 131 aa10.98□□□□□ -0.65
RFX1-201ENST00000254325 BAALC-AS2P0C853 105 aa10.98□□□□□ -0.65
RFX1-201ENST00000254325 RNF183Q96D59 192 aa10.98□□□□□ -0.65
RFX1-201ENST00000254325 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
RFX1-201ENST00000254325 IGHV3OR16-9A0A0B4J2B5 98 aa10.97□□□□□ -0.65
RFX1-201ENST00000254325 SPAG11BQ08648 103 aa10.97□□□□□ -0.65
RFX1-201ENST00000254325 ZNF561-AS1K7EIQ3 104 aa10.97□□□□□ -0.65
RFX1-201ENST00000254325 LST1O00453 97 aa10.97□□□□□ -0.65
RFX1-201ENST00000254325 CD164L2Q6UWJ8 174 aa10.96□□□□□ -0.65
RFX1-201ENST00000254325 RETNQ9HD89 108 aa10.96□□□□□ -0.65
RFX1-201ENST00000254325 A0A1B0GUV1 79 aa10.96□□□□□ -0.66
RFX1-201ENST00000254325 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
RFX1-201ENST00000254325 CXCL5P42830 114 aa10.95□□□□□ -0.66
RFX1-201ENST00000254325 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
RFX1-201ENST00000254325 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
RFX1-201ENST00000254325 CCL18P55774 89 aa10.95□□□□□ -0.66
RFX1-201ENST00000254325 NBEAL2Q6ZNJ1 2754 aa10.95□□□□□ -0.66
RFX1-201ENST00000254325 VPS13CQ709C8 3753 aa10.95□□□□□ -0.66
RFX1-201ENST00000254325 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
RFX1-201ENST00000254325 LELP1Q5T871 98 aa10.94□□□□□ -0.66
RFX1-201ENST00000254325 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
RFX1-201ENST00000254325 MRAPQ8TCY5 172 aa10.94□□□□□ -0.66
RFX1-201ENST00000254325 Q9HAA7 133 aa10.94□□□□□ -0.66
RFX1-201ENST00000254325 MT-ATP8P03928 68 aa10.93□□□□□ -0.66
RFX1-201ENST00000254325 Q8IZM0 81 aa10.93□□□□□ -0.66
RFX1-201ENST00000254325 H0YGX0 51 aa10.92□□□□□ -0.66
RFX1-201ENST00000254325 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
RFX1-201ENST00000254325 FAM19A3Q7Z5A8 133 aa10.92□□□□□ -0.66
RFX1-201ENST00000254325 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
RFX1-201ENST00000254325 LECT2O14960 151 aa10.9□□□□□ -0.66
RFX1-201ENST00000254325 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
RFX1-201ENST00000254325 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
RFX1-201ENST00000254325 LINC00612Q8N6U2 182 aa10.9□□□□□ -0.66
RFX1-201ENST00000254325 IGKV2D-24A0A075B6R9 120 aa10.9□□□□□ -0.67
RFX1-201ENST00000254325 NCR3O14931 201 aa10.9□□□□□ -0.67
RFX1-201ENST00000254325 Q8NAQ8 132 aa10.9□□□□□ -0.67
RFX1-201ENST00000254325 Q8N3U1 123 aa10.89□□□□□ -0.67
RFX1-201ENST00000254325 WFDC9Q8NEX5 89 aa10.89□□□□□ -0.67
RFX1-201ENST00000254325 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
RFX1-201ENST00000254325 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
RFX1-201ENST00000254325 C1orf43Q9BWL3 253 aa10.88□□□□□ -0.67
RFX1-201ENST00000254325 CAMK2N2Q96S95 79 aa10.88□□□□□ -0.67
RFX1-201ENST00000254325 TRACP01848 142 aa10.88□□□□□ -0.67
RFX1-201ENST00000254325 DEFB131BA0A096LNP1 70 aa10.87□□□□□ -0.67
RFX1-201ENST00000254325 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
RFX1-201ENST00000254325 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
RFX1-201ENST00000254325 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
RFX1-201ENST00000254325 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
RFX1-201ENST00000254325 Q6ZTC4 211 aa10.85□□□□□ -0.67
RFX1-201ENST00000254325 PRB2P02812 416 aaPredicted RBP10.85□□□□□ -0.67
RFX1-201ENST00000254325 KRTAP24-1Q3LI83 254 aa10.85□□□□□ -0.67
RFX1-201ENST00000254325 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
RFX1-201ENST00000254325 A0A0J9YWU9 116 aa10.84□□□□□ -0.67
RFX1-201ENST00000254325 XGP55808 180 aa10.84□□□□□ -0.67
RFX1-201ENST00000254325 ORMDL1Q9P0S3 153 aa10.84□□□□□ -0.67
RFX1-201ENST00000254325 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
RFX1-201ENST00000254325 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
RFX1-201ENST00000254325 UNQ6190/PRO20217Q6UXQ8 127 aa10.83□□□□□ -0.68
RFX1-201ENST00000254325 ZFHX3Q15911 3703 aa10.83□□□□□ -0.68
RFX1-201ENST00000254325 PRR3P79522 188 aaKnown RBP10.83□□□□□ -0.68
RFX1-201ENST00000254325 PDZD2O15018 2839 aa10.83□□□□□ -0.68
RFX1-201ENST00000254325 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
RFX1-201ENST00000254325 NSD1Q96L73 2696 aaPredicted RBP10.83□□□□□ -0.68
RFX1-201ENST00000254325 MAST4O15021 2626 aa10.82□□□□□ -0.68
RFX1-201ENST00000254325 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
RFX1-201ENST00000254325 CYSRT1A8MQ03 144 aa10.81□□□□□ -0.68
RFX1-201ENST00000254325 SLPIP03973 132 aa10.81□□□□□ -0.68
RFX1-201ENST00000254325 M0QXV9 152 aa10.81□□□□□ -0.68
RFX1-201ENST00000254325 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
RFX1-201ENST00000254325 HIVEP1P15822 2718 aa10.81□□□□□ -0.68
RFX1-201ENST00000254325 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
RFX1-201ENST00000254325 FAM236AA0A1B0GUQ0 79 aa10.8□□□□□ -0.68
RFX1-201ENST00000254325 FAM236BA0A1B0GV22 79 aa10.8□□□□□ -0.68
RFX1-201ENST00000254325 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
RFX1-201ENST00000254325 COX17Q14061 63 aa10.8□□□□□ -0.68
RFX1-201ENST00000254325 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
RFX1-201ENST00000254325 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
RFX1-201ENST00000254325 WFDC10BQ8IUB3 73 aa10.79□□□□□ -0.68
RFX1-201ENST00000254325 ACYP1P07311 99 aa10.79□□□□□ -0.68
RFX1-201ENST00000254325 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
RFX1-201ENST00000254325 IGKV2-28A0A075B6P5 120 aa10.77□□□□□ -0.69
RFX1-201ENST00000254325 A0A087WYN8 130 aa10.77□□□□□ -0.69
RFX1-201ENST00000254325 IGKV2D-28P01615 120 aa10.77□□□□□ -0.69
RFX1-201ENST00000254325 NDUFV3P56181 108 aaKnown RBP10.77□□□□□ -0.69
RFX1-201ENST00000254325 C14orf132Q9NPU4 83 aa10.77□□□□□ -0.69
RFX1-201ENST00000254325 KMT2BQ9UMN6 2715 aaPredicted RBP10.75□□□□□ -0.69
RFX1-201ENST00000254325 FAM218AQ96MZ4 157 aa10.75□□□□□ -0.69
RFX1-201ENST00000254325 KRTAP10-11P60412 298 aa10.75□□□□□ -0.69
RFX1-201ENST00000254325 KLK5Q9Y337 293 aaPredicted RBP10.75□□□□□ -0.69
RFX1-201ENST00000254325 UBE2DNLQ8IWF7 75 aa10.74□□□□□ -0.69
RFX1-201ENST00000254325 NKAPP1Q8N9T2 125 aa10.74□□□□□ -0.69
RFX1-201ENST00000254325 GHRHP01286 108 aa10.72□□□□□ -0.69
RFX1-201ENST00000254325 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
RFX1-201ENST00000254325 C10orf25Q5T742 122 aa10.72□□□□□ -0.69
RFX1-201ENST00000254325 CCDC179H3BU77 68 aa10.71□□□□□ -0.69
RFX1-201ENST00000254325 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.7
RFX1-201ENST00000254325 RMI2Q96E14 147 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms