RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 DYNC2H1Q8NCM8 4307 aaKnown RBP9.53□□□□□ -0.88
SDF2-201ENST00000247020 A0A1B0GV90 55 aa9.53□□□□□ -0.88
SDF2-201ENST00000247020 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
SDF2-201ENST00000247020 COX11Q9Y6N1 276 aa9.53□□□□□ -0.88
SDF2-201ENST00000247020 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
SDF2-201ENST00000247020 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
SDF2-201ENST00000247020 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
SDF2-201ENST00000247020 RMI2Q96E14 147 aa9.52□□□□□ -0.89
SDF2-201ENST00000247020 MEGF8Q7Z7M0 2845 aa9.52□□□□□ -0.89
SDF2-201ENST00000247020 CKS1BP61024 79 aa9.51□□□□□ -0.89
SDF2-201ENST00000247020 PRKDCP78527 4128 aaKnown RBP9.5□□□□□ -0.89
SDF2-201ENST00000247020 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
SDF2-201ENST00000247020 SPAG11BQ08648 103 aa9.5□□□□□ -0.89
SDF2-201ENST00000247020 COX17Q14061 63 aa9.5□□□□□ -0.89
SDF2-201ENST00000247020 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
SDF2-201ENST00000247020 MUC7Q8TAX7 377 aa9.5□□□□□ -0.89
SDF2-201ENST00000247020 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
SDF2-201ENST00000247020 A0A0B4J2C4 111 aa9.49□□□□□ -0.89
SDF2-201ENST00000247020 A4D1N5 150 aa9.49□□□□□ -0.89
SDF2-201ENST00000247020 F8WDY8 70 aa9.49□□□□□ -0.89
SDF2-201ENST00000247020 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
SDF2-201ENST00000247020 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
SDF2-201ENST00000247020 CFC1BP0CG36 223 aa9.47□□□□□ -0.89
SDF2-201ENST00000247020 CFC1P0CG37 223 aa9.47□□□□□ -0.89
SDF2-201ENST00000247020 C2orf48Q96LS8 159 aa9.46□□□□□ -0.89
SDF2-201ENST00000247020 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.9
SDF2-201ENST00000247020 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.9
SDF2-201ENST00000247020 K7ERJ3 54 aa9.46□□□□□ -0.9
SDF2-201ENST00000247020 LINC00158P58513 81 aa9.46□□□□□ -0.9
SDF2-201ENST00000247020 C2orf82Q6UX34 121 aa9.46□□□□□ -0.9
SDF2-201ENST00000247020 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.9
SDF2-201ENST00000247020 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
SDF2-201ENST00000247020 RAB37Q96AX2 223 aa9.46□□□□□ -0.9
SDF2-201ENST00000247020 ZNF561-AS1K7EIQ3 104 aa9.45□□□□□ -0.9
SDF2-201ENST00000247020 DAND5Q8N907 189 aa9.45□□□□□ -0.9
SDF2-201ENST00000247020 Q9HAA7 133 aa9.45□□□□□ -0.9
SDF2-201ENST00000247020 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
SDF2-201ENST00000247020 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
SDF2-201ENST00000247020 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
SDF2-201ENST00000247020 LOC107984156A0A0G2JMH3 177 aa9.43□□□□□ -0.9
SDF2-201ENST00000247020 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
SDF2-201ENST00000247020 H3BUT2 72 aa9.43□□□□□ -0.9
SDF2-201ENST00000247020 TTC32Q5I0X7 151 aa9.43□□□□□ -0.9
SDF2-201ENST00000247020 ARL17AQ8IVW1 177 aa9.43□□□□□ -0.9
SDF2-201ENST00000247020 PFN2P35080 140 aa9.42□□□□□ -0.9
SDF2-201ENST00000247020 NPC2P61916 151 aa9.42□□□□□ -0.9
SDF2-201ENST00000247020 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
SDF2-201ENST00000247020 A0A1W2PPM0 123 aa9.41□□□□□ -0.9
SDF2-201ENST00000247020 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
SDF2-201ENST00000247020 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
SDF2-201ENST00000247020 UNQ6190/PRO20217Q6UXQ8 127 aa9.41□□□□□ -0.9
SDF2-201ENST00000247020 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
SDF2-201ENST00000247020 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.9
SDF2-201ENST00000247020 FABP2P12104 132 aa9.4□□□□□ -0.9
SDF2-201ENST00000247020 VAMP3Q15836 100 aa9.4□□□□□ -0.9
SDF2-201ENST00000247020 CAMK2N2Q96S95 79 aa9.4□□□□□ -0.9
SDF2-201ENST00000247020 TSPAN13O95857 204 aa9.39□□□□□ -0.91
SDF2-201ENST00000247020 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
SDF2-201ENST00000247020 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
SDF2-201ENST00000247020 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
SDF2-201ENST00000247020 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
SDF2-201ENST00000247020 NBDYA0A0U1RRE5 68 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 GTF2H5Q6ZYL4 71 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 DNAH1Q9P2D7 4330 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 NDUFC2O95298 119 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
SDF2-201ENST00000247020 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
SDF2-201ENST00000247020 USP17L23D6RBM5 183 aa9.36□□□□□ -0.91
SDF2-201ENST00000247020 UBE2V1Q13404 147 aa9.36□□□□□ -0.91
SDF2-201ENST00000247020 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
SDF2-201ENST00000247020 NAA38Q9BRA0 125 aaKnown RBP9.36□□□□□ -0.91
SDF2-201ENST00000247020 K7EP34 96 aa9.35□□□□□ -0.91
SDF2-201ENST00000247020 SYCNQ0VAF6 134 aa9.35□□□□□ -0.91
SDF2-201ENST00000247020 Q6ZRU5 148 aa9.35□□□□□ -0.91
SDF2-201ENST00000247020 PLECQ15149 4684 aaKnown RBP9.35□□□□□ -0.91
SDF2-201ENST00000247020 FBN3Q75N90 2809 aa9.34□□□□□ -0.91
SDF2-201ENST00000247020 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
SDF2-201ENST00000247020 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
SDF2-201ENST00000247020 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
SDF2-201ENST00000247020 Q1RN00 199 aa9.33□□□□□ -0.92
SDF2-201ENST00000247020 STARD9Q9P2P6 4700 aa9.33□□□□□ -0.92
SDF2-201ENST00000247020 NDUFC2-KCTD14E9PQ53 114 aa9.32□□□□□ -0.92
SDF2-201ENST00000247020 PSCAO43653 123 aa9.32□□□□□ -0.92
SDF2-201ENST00000247020 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
SDF2-201ENST00000247020 C14orf177Q52M58 125 aa9.32□□□□□ -0.92
SDF2-201ENST00000247020 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
SDF2-201ENST00000247020 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
SDF2-201ENST00000247020 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
SDF2-201ENST00000247020 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
SDF2-201ENST00000247020 TRBV20-1A0A075B6N2 111 aa9.3□□□□□ -0.92
SDF2-201ENST00000247020 COX6CP09669 75 aa9.3□□□□□ -0.92
SDF2-201ENST00000247020 PSMB2P49721 201 aa9.3□□□□□ -0.92
SDF2-201ENST00000247020 LYSTQ99698 3801 aa9.3□□□□□ -0.92
SDF2-201ENST00000247020 H7C2G1 150 aa9.29□□□□□ -0.92
SDF2-201ENST00000247020 LINC00337Q8N6G1 96 aa9.29□□□□□ -0.92
SDF2-201ENST00000247020 C3orf84H3BNL1 204 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms