RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IGKV2-28A0A075B6P5 120 aa15.05■□□□□ 0
SH2D3A-201ENST00000245908 SMIM9A6NGZ8 99 aa15.05■□□□□ 0
SH2D3A-201ENST00000245908 IGKV2D-28P01615 120 aa15.05■□□□□ 0
SH2D3A-201ENST00000245908 LINC00158P58513 81 aa15.05■□□□□ 0
SH2D3A-201ENST00000245908 C5orf38Q86SI9 138 aa15.05■□□□□ 0
SH2D3A-201ENST00000245908 LINC00337Q8N6G1 96 aa15.05■□□□□ -0
SH2D3A-201ENST00000245908 FAM218AQ96MZ4 157 aa15.04■□□□□ -0
SH2D3A-201ENST00000245908 A0A1B0GUV1 79 aa15.03■□□□□ -0
SH2D3A-201ENST00000245908 CCL18P55774 89 aa15.03■□□□□ -0
SH2D3A-201ENST00000245908 PRO0255Q9UI72 69 aa15.03■□□□□ -0
SH2D3A-201ENST00000245908 A0A1B0GX51 115 aa15.01□□□□□ -0.01
SH2D3A-201ENST00000245908 BAALC-AS2P0C853 105 aa14.99□□□□□ -0.01
SH2D3A-201ENST00000245908 SS18Q15532 418 aa14.99□□□□□ -0.01
SH2D3A-201ENST00000245908 COX7CP15954 63 aa14.99□□□□□ -0.01
SH2D3A-201ENST00000245908 UNC79Q9P2D8 2635 aa14.99□□□□□ -0.01
SH2D3A-201ENST00000245908 LYRM9A8MSI8 78 aa14.98□□□□□ -0.01
SH2D3A-201ENST00000245908 J3KT08 172 aa14.98□□□□□ -0.01
SH2D3A-201ENST00000245908 PFN2P35080 140 aa14.97□□□□□ -0.01
SH2D3A-201ENST00000245908 XCL1P47992 114 aa14.97□□□□□ -0.01
SH2D3A-201ENST00000245908 C22orf24Q9Y442 160 aa14.97□□□□□ -0.01
SH2D3A-201ENST00000245908 C6orf226Q5I0X4 101 aa14.97□□□□□ -0.01
SH2D3A-201ENST00000245908 C9orf66Q5T8R8 295 aa14.97□□□□□ -0.01
SH2D3A-201ENST00000245908 HIVEP2P31629 2446 aa14.97□□□□□ -0.01
SH2D3A-201ENST00000245908 LY6G6DO95868 133 aa14.96□□□□□ -0.01
SH2D3A-201ENST00000245908 LINC01561Q8N1V8 128 aa14.96□□□□□ -0.01
SH2D3A-201ENST00000245908 SMIM11BQ8TCY0 68 aa14.96□□□□□ -0.01
SH2D3A-201ENST00000245908 Q8IZM0 81 aa14.96□□□□□ -0.01
SH2D3A-201ENST00000245908 PAX4O43316 350 aa14.95□□□□□ -0.02
SH2D3A-201ENST00000245908 INAFM2P0DMQ5 153 aa14.95□□□□□ -0.02
SH2D3A-201ENST00000245908 CRYGAP11844 174 aa14.95□□□□□ -0.02
SH2D3A-201ENST00000245908 HIST1H4AP62805 103 aaKnown RBP14.95□□□□□ -0.02
SH2D3A-201ENST00000245908 SPATA3Q8NHX4 192 aa14.95□□□□□ -0.02
SH2D3A-201ENST00000245908 C2orf48Q96LS8 159 aa14.95□□□□□ -0.02
SH2D3A-201ENST00000245908 A0A096LPF7 62 aa14.94□□□□□ -0.02
SH2D3A-201ENST00000245908 C5orf47Q569G3 176 aa14.94□□□□□ -0.02
SH2D3A-201ENST00000245908 RPS28P62857 69 aaKnown RBP14.93□□□□□ -0.02
SH2D3A-201ENST00000245908 C11orf68Q9H3H3 251 aaKnown RBP14.93□□□□□ -0.02
SH2D3A-201ENST00000245908 LOC107984640A0A0U1RRK4 108 aa14.92□□□□□ -0.02
SH2D3A-201ENST00000245908 ATOX1O00244 68 aa14.92□□□□□ -0.02
SH2D3A-201ENST00000245908 CLPSL2Q6UWE3 100 aa14.92□□□□□ -0.02
SH2D3A-201ENST00000245908 Q9HAA7 133 aa14.92□□□□□ -0.02
SH2D3A-201ENST00000245908 FN1P02751 2386 aaKnown RBP14.92□□□□□ -0.02
SH2D3A-201ENST00000245908 H0YGX0 51 aa14.91□□□□□ -0.02
SH2D3A-201ENST00000245908 HELZ2Q9BYK8 2649 aaKnown RBP14.9□□□□□ -0.02
SH2D3A-201ENST00000245908 MALP21145 153 aa14.9□□□□□ -0.02
SH2D3A-201ENST00000245908 DEFB135Q30KP9 77 aa14.9□□□□□ -0.02
SH2D3A-201ENST00000245908 GAGE2AQ6NT46 116 aa14.9□□□□□ -0.02
SH2D3A-201ENST00000245908 KLK5Q9Y337 293 aaPredicted RBP14.9□□□□□ -0.02
SH2D3A-201ENST00000245908 A0A087WYN8 130 aa14.89□□□□□ -0.03
SH2D3A-201ENST00000245908 GCN1Q92616 2671 aaKnown RBP14.88□□□□□ -0.03
SH2D3A-201ENST00000245908 KMT2BQ9UMN6 2715 aaPredicted RBP14.88□□□□□ -0.03
SH2D3A-201ENST00000245908 APOC4P55056 127 aa14.88□□□□□ -0.03
SH2D3A-201ENST00000245908 FASNP49327 2511 aaKnown RBP14.88□□□□□ -0.03
SH2D3A-201ENST00000245908 FAM19A5Q7Z5A7 132 aaPredicted RBP14.87□□□□□ -0.03
SH2D3A-201ENST00000245908 LINC00269Q8N2A0 174 aa14.87□□□□□ -0.03
SH2D3A-201ENST00000245908 IGHV4-28A0A0C4DH34 117 aa14.87□□□□□ -0.03
SH2D3A-201ENST00000245908 DEFB4AO15263 64 aa14.87□□□□□ -0.03
SH2D3A-201ENST00000245908 DNAL4O96015 105 aa14.87□□□□□ -0.03
SH2D3A-201ENST00000245908 CD164L2Q6UWJ8 174 aa14.87□□□□□ -0.03
SH2D3A-201ENST00000245908 DAD1P61803 113 aa14.85□□□□□ -0.03
SH2D3A-201ENST00000245908 KIAA0087Q14695 138 aa14.85□□□□□ -0.03
SH2D3A-201ENST00000245908 OR13C6PQ8NH95 151 aa14.85□□□□□ -0.03
SH2D3A-201ENST00000245908 INAFM1C9JVW0 142 aa14.83□□□□□ -0.03
SH2D3A-201ENST00000245908 CHCHD10Q8WYQ3 142 aaPredicted RBP14.83□□□□□ -0.03
SH2D3A-201ENST00000245908 RPL18AQ02543 176 aaKnown RBP14.83□□□□□ -0.04
SH2D3A-201ENST00000245908 VWFP04275 2813 aa14.82□□□□□ -0.04
SH2D3A-201ENST00000245908 ANGP03950 147 aaKnown RBP14.82□□□□□ -0.04
SH2D3A-201ENST00000245908 REG3AQ06141 175 aa14.82□□□□□ -0.04
SH2D3A-201ENST00000245908 Q8NAQ8 132 aa14.82□□□□□ -0.04
SH2D3A-201ENST00000245908 NBEAL2Q6ZNJ1 2754 aa14.81□□□□□ -0.04
SH2D3A-201ENST00000245908 COX17Q14061 63 aa14.81□□□□□ -0.04
SH2D3A-201ENST00000245908 Q8N3U1 123 aa14.81□□□□□ -0.04
SH2D3A-201ENST00000245908 CELA1Q9UNI1 258 aa14.81□□□□□ -0.04
SH2D3A-201ENST00000245908 hADV29S1A0JD25 119 aa14.81□□□□□ -0.04
SH2D3A-201ENST00000245908 LECT2O14960 151 aa14.8□□□□□ -0.04
SH2D3A-201ENST00000245908 MIFP14174 115 aa14.8□□□□□ -0.04
SH2D3A-201ENST00000245908 TMEM258P61165 79 aa14.8□□□□□ -0.04
SH2D3A-201ENST00000245908 Q6JHZ5 121 aa14.79□□□□□ -0.04
SH2D3A-201ENST00000245908 IGLV10-54A0A075B6I4 117 aa14.78□□□□□ -0.04
SH2D3A-201ENST00000245908 NDUFC2O95298 119 aa14.78□□□□□ -0.04
SH2D3A-201ENST00000245908 OBSCN-AS1Q96MR7 158 aa14.78□□□□□ -0.04
SH2D3A-201ENST00000245908 NANOS2P60321 138 aaKnown RBP14.76□□□□□ -0.05
SH2D3A-201ENST00000245908 SERP2Q8N6R1 65 aa14.76□□□□□ -0.05
SH2D3A-201ENST00000245908 C9orf129Q5T035 196 aaKnown RBP14.76□□□□□ -0.05
SH2D3A-201ENST00000245908 SPART-AS1P0CW21 52 aa14.75□□□□□ -0.05
SH2D3A-201ENST00000245908 WIPF1O43516 503 aa14.74□□□□□ -0.05
SH2D3A-201ENST00000245908 LELP1Q5T871 98 aa14.74□□□□□ -0.05
SH2D3A-201ENST00000245908 UPK3BQ9BT76 320 aa14.74□□□□□ -0.05
SH2D3A-201ENST00000245908 CYSTM1Q9H1C7 97 aa14.74□□□□□ -0.05
SH2D3A-201ENST00000245908 PRR3P79522 188 aaKnown RBP14.73□□□□□ -0.05
SH2D3A-201ENST00000245908 DPH3Q96FX2 82 aa14.73□□□□□ -0.05
SH2D3A-201ENST00000245908 LINC00167Q96N53 147 aa14.72□□□□□ -0.05
SH2D3A-201ENST00000245908 C9orf116Q5BN46 136 aaPredicted RBP14.72□□□□□ -0.05
SH2D3A-201ENST00000245908 C14orf132Q9NPU4 83 aa14.72□□□□□ -0.05
SH2D3A-201ENST00000245908 SLPIP03973 132 aa14.71□□□□□ -0.05
SH2D3A-201ENST00000245908 ORMDL1Q9P0S3 153 aa14.71□□□□□ -0.05
SH2D3A-201ENST00000245908 OTOGQ6ZRI0 2925 aa14.71□□□□□ -0.06
SH2D3A-201ENST00000245908 HTN3P15516 51 aa14.7□□□□□ -0.06
SH2D3A-201ENST00000245908 WFDC9Q8NEX5 89 aa14.69□□□□□ -0.06
SH2D3A-201ENST00000245908 NSD1Q96L73 2696 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms