RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
HOXC12-201ENST00000243103 A0A0J9YX75 114 aa10.77□□□□□ -0.69
HOXC12-201ENST00000243103 NDUFA4O00483 81 aa10.77□□□□□ -0.69
HOXC12-201ENST00000243103 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
HOXC12-201ENST00000243103 CR1P17927 2039 aa10.77□□□□□ -0.69
HOXC12-201ENST00000243103 VWFP04275 2813 aa10.76□□□□□ -0.69
HOXC12-201ENST00000243103 TRBV6-5A0A0K0K1A5 114 aa10.76□□□□□ -0.69
HOXC12-201ENST00000243103 PLA2G2AP14555 144 aa10.76□□□□□ -0.69
HOXC12-201ENST00000243103 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
HOXC12-201ENST00000243103 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
HOXC12-201ENST00000243103 UNC79Q9P2D8 2635 aa10.74□□□□□ -0.69
HOXC12-201ENST00000243103 PRR4Q16378 134 aa10.74□□□□□ -0.69
HOXC12-201ENST00000243103 A0A087WZ39 114 aa10.74□□□□□ -0.69
HOXC12-201ENST00000243103 KRTAP10-9P60411 292 aa10.74□□□□□ -0.69
HOXC12-201ENST00000243103 RPS28P62857 69 aaKnown RBP10.73□□□□□ -0.69
HOXC12-201ENST00000243103 C9orf85Q96MD7 179 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 TRAV10A0A0B4J240 114 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 C6orf226Q5I0X4 101 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 Q8N9L7 120 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 UBL5Q9BZL1 73 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 TIMM17BO60830 172 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 Q96MF0 132 aa10.73□□□□□ -0.69
HOXC12-201ENST00000243103 MSMBP08118 114 aa10.72□□□□□ -0.69
HOXC12-201ENST00000243103 IL17DQ8TAD2 202 aa10.72□□□□□ -0.69
HOXC12-201ENST00000243103 TRAV13-2A0A0B4J235 113 aa10.72□□□□□ -0.69
HOXC12-201ENST00000243103 ORMDL1Q9P0S3 153 aa10.72□□□□□ -0.69
HOXC12-201ENST00000243103 CCL18P55774 89 aa10.71□□□□□ -0.69
HOXC12-201ENST00000243103 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.69
HOXC12-201ENST00000243103 NOTCH1P46531 2555 aa10.71□□□□□ -0.69
HOXC12-201ENST00000243103 C11orf72Q8NBR9 251 aa10.71□□□□□ -0.69
HOXC12-201ENST00000243103 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.7
HOXC12-201ENST00000243103 PRO0628Q9UI54 55 aa10.71□□□□□ -0.7
HOXC12-201ENST00000243103 IGKV2-28A0A075B6P5 120 aa10.7□□□□□ -0.7
HOXC12-201ENST00000243103 IGKV2D-28P01615 120 aa10.7□□□□□ -0.7
HOXC12-201ENST00000243103 C1orf195Q5TG92 126 aa10.7□□□□□ -0.7
HOXC12-201ENST00000243103 BEAN1Q3B7T3 259 aa10.7□□□□□ -0.7
HOXC12-201ENST00000243103 M0R2N4 97 aa10.69□□□□□ -0.7
HOXC12-201ENST00000243103 SEC61GP60059 68 aa10.69□□□□□ -0.7
HOXC12-201ENST00000243103 Q6JHZ5 121 aa10.69□□□□□ -0.7
HOXC12-201ENST00000243103 V9GYY9 64 aa10.69□□□□□ -0.7
HOXC12-201ENST00000243103 UCNP55089 124 aa10.68□□□□□ -0.7
HOXC12-201ENST00000243103 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
HOXC12-201ENST00000243103 ESM1Q9NQ30 184 aa10.68□□□□□ -0.7
HOXC12-201ENST00000243103 TRGV2A0A075B6R0 118 aa10.68□□□□□ -0.7
HOXC12-201ENST00000243103 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
HOXC12-201ENST00000243103 C9orf116Q5BN46 136 aaPredicted RBP10.67□□□□□ -0.7
HOXC12-201ENST00000243103 FBXL19-AS1Q494R0 122 aa10.65□□□□□ -0.7
HOXC12-201ENST00000243103 COPS9Q8WXC6 57 aa10.65□□□□□ -0.7
HOXC12-201ENST00000243103 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
HOXC12-201ENST00000243103 LINC01600Q96MT4 127 aa10.64□□□□□ -0.71
HOXC12-201ENST00000243103 WIPF1O43516 503 aa10.64□□□□□ -0.71
HOXC12-201ENST00000243103 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
HOXC12-201ENST00000243103 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.63□□□□□ -0.71
HOXC12-201ENST00000243103 TM2D3Q9BRN9 247 aa10.63□□□□□ -0.71
HOXC12-201ENST00000243103 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
HOXC12-201ENST00000243103 TRBV7-6A0A0J9YX20 115 aa10.63□□□□□ -0.71
HOXC12-201ENST00000243103 FBN1P35555 2871 aaKnown RBP10.62□□□□□ -0.71
HOXC12-201ENST00000243103 ZNF843Q8N446 348 aa10.62□□□□□ -0.71
HOXC12-201ENST00000243103 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
HOXC12-201ENST00000243103 C6orf99Q4VX62 202 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
HOXC12-201ENST00000243103 MAST4O15021 2626 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 H7BZZ5 65 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 DEFB4AO15263 64 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 NDUFC2O95298 119 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 LYPD5Q6UWN5 251 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 SPATA3Q8NHX4 192 aa10.61□□□□□ -0.71
HOXC12-201ENST00000243103 B4DSR2 109 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 TMEM86BQ8N661 226 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 IGLV4-60A0A075B6I1 120 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 CCKP06307 115 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 DEFB130BP0DP73 79 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 DEFB130AP0DP74 79 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 NTM-AS1Q6ZSK4 140 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 A6NDX4 124 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 PSPHP1O15172 72 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 FAM229BQ4G0N7 80 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 Q8N3U1 123 aa10.6□□□□□ -0.71
HOXC12-201ENST00000243103 TENM1Q9UKZ4 2725 aa10.59□□□□□ -0.71
HOXC12-201ENST00000243103 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
HOXC12-201ENST00000243103 CELA1Q9UNI1 258 aa10.59□□□□□ -0.71
HOXC12-201ENST00000243103 SERP1Q9Y6X1 66 aa10.58□□□□□ -0.72
HOXC12-201ENST00000243103 MGAM2Q2M2H8 2515 aa10.58□□□□□ -0.72
HOXC12-201ENST00000243103 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
HOXC12-201ENST00000243103 H0YGX0 51 aa10.58□□□□□ -0.72
HOXC12-201ENST00000243103 K7EQG2 157 aa10.58□□□□□ -0.72
HOXC12-201ENST00000243103 BAHCC1Q9P281 2608 aa10.58□□□□□ -0.72
HOXC12-201ENST00000243103 TENM4Q6N022 2769 aa10.57□□□□□ -0.72
HOXC12-201ENST00000243103 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
HOXC12-201ENST00000243103 COL6A5A8TX70 2615 aa10.56□□□□□ -0.72
HOXC12-201ENST00000243103 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
HOXC12-201ENST00000243103 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
HOXC12-201ENST00000243103 STAB1Q9NY15 2570 aa10.55□□□□□ -0.72
HOXC12-201ENST00000243103 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
HOXC12-201ENST00000243103 LINC00269Q8N2A0 174 aa10.55□□□□□ -0.72
HOXC12-201ENST00000243103 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
HOXC12-201ENST00000243103 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
HOXC12-201ENST00000243103 RETNQ9HD89 108 aa10.54□□□□□ -0.72
HOXC12-201ENST00000243103 BBC3Q96PG8 261 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms