RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
IFT43-201ENST00000238628 LINC01561Q8N1V8 128 aa4.82□□□□□ -1.64
IFT43-201ENST00000238628 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
IFT43-201ENST00000238628 TOMM7Q9P0U1 55 aa4.82□□□□□ -1.64
IFT43-201ENST00000238628 RAB5AP20339 215 aa4.81□□□□□ -1.64
IFT43-201ENST00000238628 FAM74A3Q4VXF1 159 aa4.81□□□□□ -1.64
IFT43-201ENST00000238628 Q6ZN92 141 aa4.81□□□□□ -1.64
IFT43-201ENST00000238628 EIF5A2Q9GZV4 153 aaKnown RBP4.81□□□□□ -1.64
IFT43-201ENST00000238628 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
IFT43-201ENST00000238628 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
IFT43-201ENST00000238628 IGLV4-3A0A075B6K6 122 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 RPL37AP8A6NKH3 93 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 D6R8Y8 96 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 NPYP01303 97 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 TEX43Q6ZNM6 134 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
IFT43-201ENST00000238628 IGKV2D-26A0A0A0MRZ7 120 aa4.79□□□□□ -1.64
IFT43-201ENST00000238628 A0A1B0GW15 77 aa4.79□□□□□ -1.64
IFT43-201ENST00000238628 FAM229BQ4G0N7 80 aa4.79□□□□□ -1.64
IFT43-201ENST00000238628 Q8IZM0 81 aa4.79□□□□□ -1.64
IFT43-201ENST00000238628 C2orf88Q9BSF0 95 aa4.79□□□□□ -1.64
IFT43-201ENST00000238628 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
IFT43-201ENST00000238628 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
IFT43-201ENST00000238628 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
IFT43-201ENST00000238628 SMIM27A0A1W2PRY6 76 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 F8W036 122 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 PPBPP02775 128 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 SRP19P09132 144 aaKnown RBP4.78□□□□□ -1.64
IFT43-201ENST00000238628 UBE2AP49459 152 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 CTAG1AP78358 180 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 ALKAL2Q6UX46 152 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
IFT43-201ENST00000238628 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
IFT43-201ENST00000238628 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
IFT43-201ENST00000238628 S100A8P05109 93 aa4.77□□□□□ -1.65
IFT43-201ENST00000238628 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
IFT43-201ENST00000238628 RPL23P62829 140 aaKnown RBP4.77□□□□□ -1.65
IFT43-201ENST00000238628 MT1HP80294 61 aa4.77□□□□□ -1.65
IFT43-201ENST00000238628 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
IFT43-201ENST00000238628 TMEM136Q6ZRR5 245 aa4.77□□□□□ -1.65
IFT43-201ENST00000238628 VCX2Q9H322 139 aa4.77□□□□□ -1.65
IFT43-201ENST00000238628 F8VRH5 84 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 ADIRFQ15847 76 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 TCTE3Q8IZS6 198 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 ORMDL3Q8N138 153 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 LINC00337Q8N6G1 96 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 PRELID3AQ96N28 172 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 AMELXQ99217 191 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 USH2AO75445 5202 aa4.76□□□□□ -1.65
IFT43-201ENST00000238628 LOC389332A0A1B0GUA5 103 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 HERVK_113P63121 156 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 PNRC1Q12796 327 aaPredicted RBP4.75□□□□□ -1.65
IFT43-201ENST00000238628 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 FAM19A3Q7Z5A8 133 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 CDKN2A-AS1Q9UH64 79 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 CYSLTR1Q9Y271 337 aa4.75□□□□□ -1.65
IFT43-201ENST00000238628 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
IFT43-201ENST00000238628 PRSS47A8MTI9 375 aa4.74□□□□□ -1.65
IFT43-201ENST00000238628 CXCL5P42830 114 aa4.74□□□□□ -1.65
IFT43-201ENST00000238628 SEC11AP67812 179 aa4.74□□□□□ -1.65
IFT43-201ENST00000238628 NKAPP1Q8N9T2 125 aa4.74□□□□□ -1.65
IFT43-201ENST00000238628 NAT8Q9UHE5 227 aa4.74□□□□□ -1.65
IFT43-201ENST00000238628 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 IGKV2-28A0A075B6P5 120 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 A0A1B0GXF2 115 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 IGKV2D-28P01615 120 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 RAB5BP61020 215 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 PRLHP81277 87 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 SPAG11AQ6PDA7 123 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 C3orf22Q8N5N4 141 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 Q8N8P6 123 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 MAP1LC3AQ9H492 121 aa4.73□□□□□ -1.65
IFT43-201ENST00000238628 GEMIN7Q9H840 131 aaKnown RBP4.73□□□□□ -1.65
IFT43-201ENST00000238628 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
IFT43-201ENST00000238628 NPSP0C0P6 89 aa4.72□□□□□ -1.65
IFT43-201ENST00000238628 ORMDL2Q53FV1 153 aa4.72□□□□□ -1.65
IFT43-201ENST00000238628 FP248Q71RG6 208 aaPredicted RBP4.72□□□□□ -1.65
IFT43-201ENST00000238628 LAMTOR2Q9Y2Q5 125 aa4.72□□□□□ -1.65
IFT43-201ENST00000238628 SCO1O75880 301 aa4.71□□□□□ -1.66
IFT43-201ENST00000238628 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
IFT43-201ENST00000238628 PDZD11Q5EBL8 140 aa4.71□□□□□ -1.66
IFT43-201ENST00000238628 PAPPA-AS1Q5QFB9 102 aa4.71□□□□□ -1.66
IFT43-201ENST00000238628 COX7B2Q8TF08 81 aa4.71□□□□□ -1.66
IFT43-201ENST00000238628 PLEKHB2Q96CS7 222 aa4.71□□□□□ -1.66
IFT43-201ENST00000238628 M0R2T5 61 aa4.7□□□□□ -1.66
IFT43-201ENST00000238628 KRTAP13-3Q3SY46 172 aa4.7□□□□□ -1.66
IFT43-201ENST00000238628 ATP5L2Q7Z4Y8 100 aa4.7□□□□□ -1.66
IFT43-201ENST00000238628 CBLN2Q8IUK8 224 aa4.7□□□□□ -1.66
IFT43-201ENST00000238628 TMEM126AQ9H061 195 aa4.7□□□□□ -1.66
IFT43-201ENST00000238628 SMIM1B2RUZ4 78 aa4.69□□□□□ -1.66
IFT43-201ENST00000238628 TMEM238C9JI98 176 aa4.69□□□□□ -1.66
IFT43-201ENST00000238628 C9JQL5 133 aa4.69□□□□□ -1.66
IFT43-201ENST00000238628 K7EMI3 77 aa4.69□□□□□ -1.66
IFT43-201ENST00000238628 G0S2P27469 103 aa4.69□□□□□ -1.66
IFT43-201ENST00000238628 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms