RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CYSRT1A8MQ03 144 aa5.96□□□□□ -1.46
APOB-201ENST00000233242 LINC00474Q9P2X8 69 aa5.96□□□□□ -1.46
APOB-201ENST00000233242 HILS1P60008 231 aa5.96□□□□□ -1.46
APOB-201ENST00000233242 SHISA2Q6UWI4 295 aa5.96□□□□□ -1.46
APOB-201ENST00000233242 LINC00208Q96KT6 92 aa5.96□□□□□ -1.46
APOB-201ENST00000233242 PSPHP1O15172 72 aa5.95□□□□□ -1.46
APOB-201ENST00000233242 Q6ZVQ6 151 aa5.95□□□□□ -1.46
APOB-201ENST00000233242 Q8NA96 180 aa5.95□□□□□ -1.46
APOB-201ENST00000233242 BEAN1Q3B7T3 259 aa5.95□□□□□ -1.46
APOB-201ENST00000233242 IGKV2-28A0A075B6P5 120 aa5.94□□□□□ -1.46
APOB-201ENST00000233242 IGKV2D-28P01615 120 aa5.94□□□□□ -1.46
APOB-201ENST00000233242 SBSPONQ8IVN8 264 aa5.94□□□□□ -1.46
APOB-201ENST00000233242 DEFB131BA0A096LNP1 70 aa5.94□□□□□ -1.46
APOB-201ENST00000233242 CHD8Q9HCK8 2581 aa5.94□□□□□ -1.46
APOB-201ENST00000233242 ZNF580Q9UK33 172 aa5.94□□□□□ -1.46
APOB-201ENST00000233242 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
APOB-201ENST00000233242 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
APOB-201ENST00000233242 A0A1B0GUV1 79 aa5.93□□□□□ -1.46
APOB-201ENST00000233242 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
APOB-201ENST00000233242 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
APOB-201ENST00000233242 C11orf71Q6IPW1 123 aa5.93□□□□□ -1.46
APOB-201ENST00000233242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.92□□□□□ -1.46
APOB-201ENST00000233242 A0A096LNI7 61 aa5.92□□□□□ -1.46
APOB-201ENST00000233242 HCG22E2RYF7 251 aa5.92□□□□□ -1.46
APOB-201ENST00000233242 ZNF843Q8N446 348 aa5.92□□□□□ -1.46
APOB-201ENST00000233242 MUC22E2RYF6 1773 aaPredicted RBP5.92□□□□□ -1.46
APOB-201ENST00000233242 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
APOB-201ENST00000233242 A0A0J9YWU9 116 aa5.91□□□□□ -1.46
APOB-201ENST00000233242 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
APOB-201ENST00000233242 COX6A2Q02221 97 aa5.91□□□□□ -1.46
APOB-201ENST00000233242 TRAV10A0A0B4J240 114 aa5.9□□□□□ -1.46
APOB-201ENST00000233242 UNQ6190/PRO20217Q6UXQ8 127 aa5.9□□□□□ -1.46
APOB-201ENST00000233242 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
APOB-201ENST00000233242 LRCOL1A6NCL2 159 aa5.9□□□□□ -1.46
APOB-201ENST00000233242 KPRPQ5T749 579 aaPredicted RBP5.9□□□□□ -1.46
APOB-201ENST00000233242 ANKRD17O75179 2603 aaKnown RBP5.9□□□□□ -1.47
APOB-201ENST00000233242 Q6ZSV7 163 aa5.9□□□□□ -1.47
APOB-201ENST00000233242 H0Y9P7 68 aa5.9□□□□□ -1.47
APOB-201ENST00000233242 C2orf48Q96LS8 159 aa5.9□□□□□ -1.47
APOB-201ENST00000233242 WISP2O76076 250 aa5.89□□□□□ -1.47
APOB-201ENST00000233242 USP24Q9UPU5 2620 aa5.89□□□□□ -1.47
APOB-201ENST00000233242 C7orf33Q8WU49 177 aa5.89□□□□□ -1.47
APOB-201ENST00000233242 ZNF702PQ9H963 129 aa5.89□□□□□ -1.47
APOB-201ENST00000233242 H3BPC8 53 aa5.89□□□□□ -1.47
APOB-201ENST00000233242 IGHV4-31P0DP07 118 aa5.89□□□□□ -1.47
APOB-201ENST00000233242 RAI1Q7Z5J4 1906 aaPredicted RBP5.89□□□□□ -1.47
APOB-201ENST00000233242 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
APOB-201ENST00000233242 VPREB1P12018 145 aa5.88□□□□□ -1.47
APOB-201ENST00000233242 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
APOB-201ENST00000233242 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 TP53AIP1Q9HCN2 124 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 IGLV5-45A0A087WSX0 123 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 RPL37AP8A6NKH3 93 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 KIF25-AS1Q9Y6Z4 181 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
APOB-201ENST00000233242 PRRC2CQ9Y520 2896 aaKnown RBP5.86□□□□□ -1.47
APOB-201ENST00000233242 FASNP49327 2511 aaKnown RBP5.86□□□□□ -1.47
APOB-201ENST00000233242 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
APOB-201ENST00000233242 SPINK6Q6UWN8 80 aa5.85□□□□□ -1.47
APOB-201ENST00000233242 C10orf142B7Z368 130 aa5.85□□□□□ -1.47
APOB-201ENST00000233242 C1orf64Q8NEQ6 169 aa5.85□□□□□ -1.47
APOB-201ENST00000233242 C10orf99Q6UWK7 81 aa5.85□□□□□ -1.47
APOB-201ENST00000233242 ODF3L2Q3SX64 289 aa5.84□□□□□ -1.47
APOB-201ENST00000233242 IGLV4-60A0A075B6I1 120 aa5.84□□□□□ -1.47
APOB-201ENST00000233242 NANOS2P60321 138 aaKnown RBP5.84□□□□□ -1.47
APOB-201ENST00000233242 SERTAD4-AS1Q5TG53 156 aa5.84□□□□□ -1.47
APOB-201ENST00000233242 PRR3P79522 188 aaKnown RBP5.84□□□□□ -1.47
APOB-201ENST00000233242 FHL2Q14192 279 aa5.84□□□□□ -1.48
APOB-201ENST00000233242 Q9BRP9 147 aa5.83□□□□□ -1.48
APOB-201ENST00000233242 SPATA3Q8NHX4 192 aa5.83□□□□□ -1.48
APOB-201ENST00000233242 IGHV4-30-4P0DP06 118 aa5.82□□□□□ -1.48
APOB-201ENST00000233242 A0A087WSZ3 146 aa5.82□□□□□ -1.48
APOB-201ENST00000233242 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
APOB-201ENST00000233242 Q8N2B8 174 aa5.82□□□□□ -1.48
APOB-201ENST00000233242 IGLV9-49A0A0B4J1Y8 123 aa5.81□□□□□ -1.48
APOB-201ENST00000233242 IGHV3OR16-9A0A0B4J2B5 98 aa5.81□□□□□ -1.48
APOB-201ENST00000233242 PCOTHQ58A44 107 aa5.81□□□□□ -1.48
APOB-201ENST00000233242 PRM2P04554 102 aa5.81□□□□□ -1.48
APOB-201ENST00000233242 Q6ZQT0 140 aa5.81□□□□□ -1.48
APOB-201ENST00000233242 C11orf72Q8NBR9 251 aa5.8□□□□□ -1.48
APOB-201ENST00000233242 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.8□□□□□ -1.48
APOB-201ENST00000233242 LINC00482Q8N8I6 264 aa5.8□□□□□ -1.48
APOB-201ENST00000233242 LINC01006Q8NI28 216 aa5.8□□□□□ -1.48
APOB-201ENST00000233242 SMIM29Q86T20 159 aa5.8□□□□□ -1.48
APOB-201ENST00000233242 LINC00315P59091 139 aa5.8□□□□□ -1.48
APOB-201ENST00000233242 Q6ZSN1 163 aa5.8□□□□□ -1.48
APOB-201ENST00000233242 IGLV1-51P01701 117 aa5.79□□□□□ -1.48
APOB-201ENST00000233242 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
APOB-201ENST00000233242 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
APOB-201ENST00000233242 CYP4F30PQ9H0H9 118 aa5.79□□□□□ -1.48
APOB-201ENST00000233242 FAM19A4Q96LR4 140 aa5.78□□□□□ -1.48
APOB-201ENST00000233242 ACYP2P14621 99 aa5.78□□□□□ -1.48
APOB-201ENST00000233242 FAM218AQ96MZ4 157 aa5.78□□□□□ -1.48
APOB-201ENST00000233242 C6orf223Q8N319 242 aa5.78□□□□□ -1.48
APOB-201ENST00000233242 C19orf84I3L1E1 186 aa5.78□□□□□ -1.48
APOB-201ENST00000233242 A0A1B0GU69 56 aa5.77□□□□□ -1.49
APOB-201ENST00000233242 Q6ZTC4 211 aa5.77□□□□□ -1.49
APOB-201ENST00000233242 C18orf65Q6ZTR6 163 aa5.76□□□□□ -1.49
APOB-201ENST00000233242 Q8NBF4 154 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms