RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 OTOGLQ3ZCN5 2332 aa9.51□□□□□ -0.89
NEK4-201ENST00000233027 CSPG4Q6UVK1 2322 aa9.51□□□□□ -0.89
NEK4-201ENST00000233027 LINC00575Q6W349 94 aa9.51□□□□□ -0.89
NEK4-201ENST00000233027 Q6ZTC4 211 aa9.5□□□□□ -0.89
NEK4-201ENST00000233027 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
NEK4-201ENST00000233027 LINC01547P58512 204 aaPredicted RBP9.49□□□□□ -0.89
NEK4-201ENST00000233027 BDP1A6H8Y1 2624 aa9.49□□□□□ -0.89
NEK4-201ENST00000233027 IGHV6-1A0A0B4J1U7 121 aa9.48□□□□□ -0.89
NEK4-201ENST00000233027 CIRBP-AS1Q8TBR5 109 aa9.48□□□□□ -0.89
NEK4-201ENST00000233027 LINC00846Q9NV44 126 aa9.48□□□□□ -0.89
NEK4-201ENST00000233027 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
NEK4-201ENST00000233027 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
NEK4-201ENST00000233027 PCOTHQ58A44 107 aa9.47□□□□□ -0.89
NEK4-201ENST00000233027 CDIP1Q9H305 208 aa9.47□□□□□ -0.89
NEK4-201ENST00000233027 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.89
NEK4-201ENST00000233027 PSPHP1O15172 72 aa9.46□□□□□ -0.89
NEK4-201ENST00000233027 ADAMTS20P59510 1910 aa9.46□□□□□ -0.9
NEK4-201ENST00000233027 Q9BRP9 147 aa9.45□□□□□ -0.9
NEK4-201ENST00000233027 Q6ZVQ6 151 aa9.45□□□□□ -0.9
NEK4-201ENST00000233027 TRBV7-7A0A0K0K1E9 115 aa9.43□□□□□ -0.9
NEK4-201ENST00000233027 KIF25-AS1Q9Y6Z4 181 aa9.43□□□□□ -0.9
NEK4-201ENST00000233027 A0A087WSZ3 146 aa9.43□□□□□ -0.9
NEK4-201ENST00000233027 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
NEK4-201ENST00000233027 PMAIP1Q13794 54 aa9.42□□□□□ -0.9
NEK4-201ENST00000233027 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
NEK4-201ENST00000233027 Q6ZRU5 148 aa9.42□□□□□ -0.9
NEK4-201ENST00000233027 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
NEK4-201ENST00000233027 A0A1B0GUV1 79 aa9.41□□□□□ -0.9
NEK4-201ENST00000233027 H0Y9P7 68 aa9.41□□□□□ -0.9
NEK4-201ENST00000233027 PTPN13Q12923 2485 aa9.41□□□□□ -0.9
NEK4-201ENST00000233027 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
NEK4-201ENST00000233027 CUL9Q8IWT3 2517 aa9.41□□□□□ -0.9
NEK4-201ENST00000233027 TET2Q6N021 2002 aaPredicted RBP9.4□□□□□ -0.9
NEK4-201ENST00000233027 C16orf95Q9H693 158 aa9.39□□□□□ -0.91
NEK4-201ENST00000233027 AGRNO00468 2067 aa9.39□□□□□ -0.91
NEK4-201ENST00000233027 TTC28Q96AY4 2481 aa9.39□□□□□ -0.91
NEK4-201ENST00000233027 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
NEK4-201ENST00000233027 PRLHP81277 87 aa9.39□□□□□ -0.91
NEK4-201ENST00000233027 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
NEK4-201ENST00000233027 PRRC2AP48634 2157 aaKnown RBP9.38□□□□□ -0.91
NEK4-201ENST00000233027 ACACBO00763 2458 aa9.38□□□□□ -0.91
NEK4-201ENST00000233027 HIVEP3Q5T1R4 2406 aa9.38□□□□□ -0.91
NEK4-201ENST00000233027 Q8N2B8 174 aa9.38□□□□□ -0.91
NEK4-201ENST00000233027 C11orf72Q8NBR9 251 aa9.38□□□□□ -0.91
NEK4-201ENST00000233027 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
NEK4-201ENST00000233027 SBSPONQ8IVN8 264 aa9.38□□□□□ -0.91
NEK4-201ENST00000233027 EP400Q96L91 3159 aa9.37□□□□□ -0.91
NEK4-201ENST00000233027 Q9UF83 564 aa9.37□□□□□ -0.91
NEK4-201ENST00000233027 HCG22E2RYF7 251 aa9.36□□□□□ -0.91
NEK4-201ENST00000233027 SPINK1P00995 79 aa9.36□□□□□ -0.91
NEK4-201ENST00000233027 CRYGAP11844 174 aa9.36□□□□□ -0.91
NEK4-201ENST00000233027 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
NEK4-201ENST00000233027 LINC00315P59091 139 aa9.35□□□□□ -0.91
NEK4-201ENST00000233027 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
NEK4-201ENST00000233027 NUPR2A6NF83 97 aa9.35□□□□□ -0.91
NEK4-201ENST00000233027 X6R8D5 127 aa9.35□□□□□ -0.91
NEK4-201ENST00000233027 FAM218AQ96MZ4 157 aa9.34□□□□□ -0.91
NEK4-201ENST00000233027 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
NEK4-201ENST00000233027 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
NEK4-201ENST00000233027 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
NEK4-201ENST00000233027 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
NEK4-201ENST00000233027 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
NEK4-201ENST00000233027 SPATA3Q8NHX4 192 aa9.32□□□□□ -0.92
NEK4-201ENST00000233027 CXCL6P80162 114 aa9.31□□□□□ -0.92
NEK4-201ENST00000233027 SONP18583 2426 aaKnown RBP9.31□□□□□ -0.92
NEK4-201ENST00000233027 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
NEK4-201ENST00000233027 PRO0461Q9UI25 63 aa9.3□□□□□ -0.92
NEK4-201ENST00000233027 F8WDY8 70 aa9.3□□□□□ -0.92
NEK4-201ENST00000233027 NOTCH2Q04721 2471 aa9.29□□□□□ -0.92
NEK4-201ENST00000233027 IGHV3OR16-9A0A0B4J2B5 98 aa9.29□□□□□ -0.92
NEK4-201ENST00000233027 C2CD3Q4AC94 2353 aa9.29□□□□□ -0.92
NEK4-201ENST00000233027 PIEZO2Q9H5I5 2752 aa9.29□□□□□ -0.92
NEK4-201ENST00000233027 C1orf64Q8NEQ6 169 aa9.28□□□□□ -0.92
NEK4-201ENST00000233027 ATRXP46100 2492 aa9.27□□□□□ -0.93
NEK4-201ENST00000233027 C6orf48Q9UBA6 75 aa9.26□□□□□ -0.93
NEK4-201ENST00000233027 PTPRBP23467 1997 aa9.25□□□□□ -0.93
NEK4-201ENST00000233027 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
NEK4-201ENST00000233027 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
NEK4-201ENST00000233027 COL27A1Q8IZC6 1860 aaPredicted RBP9.23□□□□□ -0.93
NEK4-201ENST00000233027 IGLV5-45A0A087WSX0 123 aa9.22□□□□□ -0.93
NEK4-201ENST00000233027 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
NEK4-201ENST00000233027 NAV2Q8IVL1 2488 aa9.22□□□□□ -0.93
NEK4-201ENST00000233027 FHL3Q13643 280 aa9.22□□□□□ -0.93
NEK4-201ENST00000233027 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
NEK4-201ENST00000233027 IGKV2D-30A0A075B6S6 120 aa9.2□□□□□ -0.94
NEK4-201ENST00000233027 IGKV2-30P06310 120 aa9.2□□□□□ -0.94
NEK4-201ENST00000233027 Q6ZQT0 140 aa9.2□□□□□ -0.94
NEK4-201ENST00000233027 WDR87Q6ZQQ6 2873 aa9.19□□□□□ -0.94
NEK4-201ENST00000233027 ELOF1P60002 83 aaKnown RBP9.19□□□□□ -0.94
NEK4-201ENST00000233027 MOBPQ13875 183 aa9.17□□□□□ -0.94
NEK4-201ENST00000233027 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
NEK4-201ENST00000233027 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
NEK4-201ENST00000233027 IGF2RP11717 2491 aa9.16□□□□□ -0.94
NEK4-201ENST00000233027 COL4A2P08572 1712 aa9.16□□□□□ -0.94
NEK4-201ENST00000233027 ABCA2Q9BZC7 2435 aa9.16□□□□□ -0.94
NEK4-201ENST00000233027 CACNA1AO00555 2505 aa9.16□□□□□ -0.94
NEK4-201ENST00000233027 ST20-AS1Q8NBB2 130 aa9.15□□□□□ -0.94
NEK4-201ENST00000233027 PRO0628Q9UI54 55 aa9.15□□□□□ -0.94
NEK4-201ENST00000233027 TM2D3Q9BRN9 247 aa9.15□□□□□ -0.94
NEK4-201ENST00000233027 PHF5AQ7RTV0 110 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms