RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 C1orf43Q9BWL3 253 aa15.99■□□□□ 0.15
RRP9-201ENST00000232888 STAB2Q8WWQ8 2551 aa15.98■□□□□ 0.15
RRP9-201ENST00000232888 CKS1BP61024 79 aa15.98■□□□□ 0.15
RRP9-201ENST00000232888 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.97■□□□□ 0.15
RRP9-201ENST00000232888 C9orf118A6NHY6 69 aa15.97■□□□□ 0.15
RRP9-201ENST00000232888 KRTAP26-1Q6PEX3 210 aa15.97■□□□□ 0.15
RRP9-201ENST00000232888 COL7A1Q02388 2944 aa15.97■□□□□ 0.15
RRP9-201ENST00000232888 A4D1N5 150 aa15.95■□□□□ 0.14
RRP9-201ENST00000232888 K7ERJ3 54 aa15.94■□□□□ 0.14
RRP9-201ENST00000232888 RAB37Q96AX2 223 aa15.94■□□□□ 0.14
RRP9-201ENST00000232888 SPAG11BQ08648 103 aa15.93■□□□□ 0.14
RRP9-201ENST00000232888 CFC1BP0CG36 223 aa15.92■□□□□ 0.14
RRP9-201ENST00000232888 CFC1P0CG37 223 aa15.92■□□□□ 0.14
RRP9-201ENST00000232888 LINC00308Q8TCZ7 52 aa15.92■□□□□ 0.14
RRP9-201ENST00000232888 RMI2Q96E14 147 aa15.92■□□□□ 0.14
RRP9-201ENST00000232888 A0A0B4J2C4 111 aa15.92■□□□□ 0.14
RRP9-201ENST00000232888 ERG28Q9UKR5 140 aa15.92■□□□□ 0.14
RRP9-201ENST00000232888 COX17Q14061 63 aa15.91■□□□□ 0.14
RRP9-201ENST00000232888 IGKV2D-24A0A075B6R9 120 aa15.9■□□□□ 0.14
RRP9-201ENST00000232888 LINC00158P58513 81 aa15.9■□□□□ 0.14
RRP9-201ENST00000232888 UBE2DNLQ8IWF7 75 aa15.9■□□□□ 0.14
RRP9-201ENST00000232888 C2orf82Q6UX34 121 aa15.89■□□□□ 0.13
RRP9-201ENST00000232888 DAND5Q8N907 189 aa15.89■□□□□ 0.13
RRP9-201ENST00000232888 MEGF8Q7Z7M0 2845 aa15.89■□□□□ 0.13
RRP9-201ENST00000232888 A0A0U1RRA0 63 aa15.88■□□□□ 0.13
RRP9-201ENST00000232888 H3BUT2 72 aa15.88■□□□□ 0.13
RRP9-201ENST00000232888 PRO1854Q9UHT4 67 aa15.88■□□□□ 0.13
RRP9-201ENST00000232888 F8WDY8 70 aa15.87■□□□□ 0.13
RRP9-201ENST00000232888 MIR7-3HGQ8N6C7 128 aa15.87■□□□□ 0.13
RRP9-201ENST00000232888 MUC7Q8TAX7 377 aa15.87■□□□□ 0.13
RRP9-201ENST00000232888 NTN5Q8WTR8 489 aaPredicted RBP15.86■□□□□ 0.13
RRP9-201ENST00000232888 VAMP3Q15836 100 aa15.85■□□□□ 0.13
RRP9-201ENST00000232888 Q9HAA7 133 aa15.85■□□□□ 0.13
RRP9-201ENST00000232888 GVQW2A0A096LPI5 108 aaPredicted RBP15.84■□□□□ 0.13
RRP9-201ENST00000232888 A0A1W2PPM0 123 aa15.84■□□□□ 0.13
RRP9-201ENST00000232888 NPC2P61916 151 aa15.84■□□□□ 0.13
RRP9-201ENST00000232888 ZNF561-AS1K7EIQ3 104 aa15.83■□□□□ 0.13
RRP9-201ENST00000232888 PFN2P35080 140 aa15.83■□□□□ 0.13
RRP9-201ENST00000232888 PGPEP1Q9NXJ5 209 aa15.83■□□□□ 0.13
RRP9-201ENST00000232888 SOSTDC1Q6X4U4 206 aa15.83■□□□□ 0.12
RRP9-201ENST00000232888 C2orf48Q96LS8 159 aa15.83■□□□□ 0.12
RRP9-201ENST00000232888 FABP2P12104 132 aa15.82■□□□□ 0.12
RRP9-201ENST00000232888 EIF4EBP3O60516 100 aaPredicted RBP15.81■□□□□ 0.12
RRP9-201ENST00000232888 C15orf56Q8N910 161 aa15.81■□□□□ 0.12
RRP9-201ENST00000232888 UNQ6190/PRO20217Q6UXQ8 127 aa15.8■□□□□ 0.12
RRP9-201ENST00000232888 C6orf223Q8N319 242 aa15.8■□□□□ 0.12
RRP9-201ENST00000232888 LOC107984156A0A0G2JMH3 177 aa15.79■□□□□ 0.12
RRP9-201ENST00000232888 ARL17AQ8IVW1 177 aa15.79■□□□□ 0.12
RRP9-201ENST00000232888 TRBV30A0A0K0K1B3 111 aa15.79■□□□□ 0.12
RRP9-201ENST00000232888 TSPAN13O95857 204 aa15.79■□□□□ 0.12
RRP9-201ENST00000232888 NAA38Q9BRA0 125 aaKnown RBP15.79■□□□□ 0.12
RRP9-201ENST00000232888 UBE2V1Q13404 147 aa15.78■□□□□ 0.12
RRP9-201ENST00000232888 DYNC2H1Q8NCM8 4307 aaKnown RBP15.77■□□□□ 0.12
RRP9-201ENST00000232888 PRKDCP78527 4128 aaKnown RBP15.77■□□□□ 0.12
RRP9-201ENST00000232888 C10orf25Q5T742 122 aa15.77■□□□□ 0.11
RRP9-201ENST00000232888 GTF2H5Q6ZYL4 71 aa15.77■□□□□ 0.11
RRP9-201ENST00000232888 CAMK2N2Q96S95 79 aa15.76■□□□□ 0.11
RRP9-201ENST00000232888 SND1-IT1Q9HBX3 110 aa15.76■□□□□ 0.11
RRP9-201ENST00000232888 HIGD2BQ4VC39 106 aa15.75■□□□□ 0.11
RRP9-201ENST00000232888 TTC32Q5I0X7 151 aa15.75■□□□□ 0.11
RRP9-201ENST00000232888 LYRM7Q5U5X0 104 aa15.75■□□□□ 0.11
RRP9-201ENST00000232888 LINC00526Q96FQ7 95 aa15.75■□□□□ 0.11
RRP9-201ENST00000232888 GAGE10A6NGK3 116 aa15.75■□□□□ 0.11
RRP9-201ENST00000232888 K7EP34 96 aa15.73■□□□□ 0.11
RRP9-201ENST00000232888 SPCS1Q9Y6A9 102 aa15.73■□□□□ 0.11
RRP9-201ENST00000232888 C9orf116Q5BN46 136 aaPredicted RBP15.72■□□□□ 0.11
RRP9-201ENST00000232888 C6orf48Q9UBA6 75 aa15.72■□□□□ 0.11
RRP9-201ENST00000232888 TRAV13-2A0A0B4J235 113 aa15.71■□□□□ 0.11
RRP9-201ENST00000232888 KRTAP1-5Q9BYS1 174 aa15.7■□□□□ 0.1
RRP9-201ENST00000232888 USP17L23D6RBM5 183 aa15.69■□□□□ 0.1
RRP9-201ENST00000232888 NDUFC2O95298 119 aa15.69■□□□□ 0.1
RRP9-201ENST00000232888 Q1RN00 199 aa15.69■□□□□ 0.1
RRP9-201ENST00000232888 RPL13AP40429 203 aaKnown RBP15.68■□□□□ 0.1
RRP9-201ENST00000232888 SYCNQ0VAF6 134 aa15.68■□□□□ 0.1
RRP9-201ENST00000232888 NBDYA0A0U1RRE5 68 aa15.67■□□□□ 0.1
RRP9-201ENST00000232888 RNF151Q2KHN1 245 aa15.67■□□□□ 0.1
RRP9-201ENST00000232888 Q6ZRU5 148 aa15.67■□□□□ 0.1
RRP9-201ENST00000232888 PSMB2P49721 201 aa15.66■□□□□ 0.1
RRP9-201ENST00000232888 H7C2G1 150 aa15.66■□□□□ 0.1
RRP9-201ENST00000232888 WWC2-AS2Q96NR7 200 aa15.65■□□□□ 0.1
RRP9-201ENST00000232888 TRBV20-1A0A075B6N2 111 aa15.64■□□□□ 0.09
RRP9-201ENST00000232888 IGKV2-28A0A075B6P5 120 aa15.64■□□□□ 0.09
RRP9-201ENST00000232888 IGKV2D-28P01615 120 aa15.64■□□□□ 0.09
RRP9-201ENST00000232888 CASC10Q5T4H9 136 aa15.64■□□□□ 0.09
RRP9-201ENST00000232888 SCGB1C2P0DMR2 95 aa15.63■□□□□ 0.09
RRP9-201ENST00000232888 FBN3Q75N90 2809 aa15.63■□□□□ 0.09
RRP9-201ENST00000232888 COX6CP09669 75 aa15.62■□□□□ 0.09
RRP9-201ENST00000232888 NDUFC2-KCTD14E9PQ53 114 aa15.62■□□□□ 0.09
RRP9-201ENST00000232888 CARD19Q96LW7 228 aa15.62■□□□□ 0.09
RRP9-201ENST00000232888 PSCAO43653 123 aa15.61■□□□□ 0.09
RRP9-201ENST00000232888 LINC00337Q8N6G1 96 aa15.61■□□□□ 0.09
RRP9-201ENST00000232888 DNAH7Q8WXX0 4024 aa15.6■□□□□ 0.09
RRP9-201ENST00000232888 TRIAP1O43715 76 aa15.59■□□□□ 0.09
RRP9-201ENST00000232888 C14orf177Q52M58 125 aa15.58■□□□□ 0.09
RRP9-201ENST00000232888 TLX1NBP0CAT3 122 aa15.58■□□□□ 0.08
RRP9-201ENST00000232888 CSMD3Q7Z407 3707 aa15.55■□□□□ 0.08
RRP9-201ENST00000232888 TRBV10-2A0A0K0K1G8 114 aa15.54■□□□□ 0.08
RRP9-201ENST00000232888 RPL28P46779 137 aaKnown RBP15.54■□□□□ 0.08
RRP9-201ENST00000232888 DNAH1Q9P2D7 4330 aa15.54■□□□□ 0.08
RRP9-201ENST00000232888 SLPIP03973 132 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms