RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
LTBR-201ENST00000228918 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
LTBR-201ENST00000228918 GYPEP15421 78 aa11.32□□□□□ -0.6
LTBR-201ENST00000228918 UQCRQO14949 82 aa11.32□□□□□ -0.6
LTBR-201ENST00000228918 C9orf153Q5TBE3 101 aa11.32□□□□□ -0.6
LTBR-201ENST00000228918 SMIM11BQ8TCY0 68 aa11.31□□□□□ -0.6
LTBR-201ENST00000228918 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
LTBR-201ENST00000228918 Q9HAA7 133 aa11.3□□□□□ -0.6
LTBR-201ENST00000228918 ATP5G1P05496 136 aa11.3□□□□□ -0.6
LTBR-201ENST00000228918 PFN2P35080 140 aa11.3□□□□□ -0.6
LTBR-201ENST00000228918 KRTAP10-3P60369 221 aa11.3□□□□□ -0.6
LTBR-201ENST00000228918 X6R8D5 127 aa11.3□□□□□ -0.6
LTBR-201ENST00000228918 LINC00482Q8N8I6 264 aa11.29□□□□□ -0.6
LTBR-201ENST00000228918 FN1P02751 2386 aaKnown RBP11.29□□□□□ -0.6
LTBR-201ENST00000228918 A0A1B0GUV1 79 aa11.29□□□□□ -0.6
LTBR-201ENST00000228918 MALP21145 153 aa11.29□□□□□ -0.6
LTBR-201ENST00000228918 A0A087WYN8 130 aa11.28□□□□□ -0.6
LTBR-201ENST00000228918 ITPR2Q14571 2701 aa11.28□□□□□ -0.6
LTBR-201ENST00000228918 XCL1P47992 114 aa11.28□□□□□ -0.6
LTBR-201ENST00000228918 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
LTBR-201ENST00000228918 CXCL5P42830 114 aa11.27□□□□□ -0.61
LTBR-201ENST00000228918 SS18Q15532 418 aa11.27□□□□□ -0.61
LTBR-201ENST00000228918 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.61
LTBR-201ENST00000228918 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.61
LTBR-201ENST00000228918 PRO0255Q9UI72 69 aa11.26□□□□□ -0.61
LTBR-201ENST00000228918 H0YGX0 51 aa11.26□□□□□ -0.61
LTBR-201ENST00000228918 PAX4O43316 350 aa11.26□□□□□ -0.61
LTBR-201ENST00000228918 DNAL4O96015 105 aa11.26□□□□□ -0.61
LTBR-201ENST00000228918 Q8IZM0 81 aa11.26□□□□□ -0.61
LTBR-201ENST00000228918 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
LTBR-201ENST00000228918 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
LTBR-201ENST00000228918 A0A096LPF7 62 aa11.24□□□□□ -0.61
LTBR-201ENST00000228918 A0A1B0GX51 115 aa11.24□□□□□ -0.61
LTBR-201ENST00000228918 LY6G6DO95868 133 aa11.24□□□□□ -0.61
LTBR-201ENST00000228918 LINC01561Q8N1V8 128 aa11.24□□□□□ -0.61
LTBR-201ENST00000228918 COX7CP15954 63 aa11.23□□□□□ -0.61
LTBR-201ENST00000228918 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
LTBR-201ENST00000228918 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
LTBR-201ENST00000228918 HIST1H4AP62805 103 aaKnown RBP11.22□□□□□ -0.61
LTBR-201ENST00000228918 OR13C6PQ8NH95 151 aa11.22□□□□□ -0.61
LTBR-201ENST00000228918 SMR3AQ99954 134 aa11.21□□□□□ -0.61
LTBR-201ENST00000228918 LYRM9A8MSI8 78 aa11.21□□□□□ -0.62
LTBR-201ENST00000228918 J3KT08 172 aa11.21□□□□□ -0.62
LTBR-201ENST00000228918 LECT2O14960 151 aa11.21□□□□□ -0.62
LTBR-201ENST00000228918 CRYGAP11844 174 aa11.21□□□□□ -0.62
LTBR-201ENST00000228918 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.62
LTBR-201ENST00000228918 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.62
LTBR-201ENST00000228918 HIVEP2P31629 2446 aa11.21□□□□□ -0.62
LTBR-201ENST00000228918 C9orf129Q5T035 196 aaKnown RBP11.2□□□□□ -0.62
LTBR-201ENST00000228918 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
LTBR-201ENST00000228918 SPATA3Q8NHX4 192 aa11.19□□□□□ -0.62
LTBR-201ENST00000228918 OBSCN-AS1Q96MR7 158 aa11.19□□□□□ -0.62
LTBR-201ENST00000228918 NBEAL2Q6ZNJ1 2754 aa11.19□□□□□ -0.62
LTBR-201ENST00000228918 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
LTBR-201ENST00000228918 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
LTBR-201ENST00000228918 C5orf47Q569G3 176 aa11.18□□□□□ -0.62
LTBR-201ENST00000228918 CD164L2Q6UWJ8 174 aa11.18□□□□□ -0.62
LTBR-201ENST00000228918 LINC00269Q8N2A0 174 aa11.18□□□□□ -0.62
LTBR-201ENST00000228918 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
LTBR-201ENST00000228918 ATOX1O00244 68 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 C9orf66Q5T8R8 295 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 C14orf132Q9NPU4 83 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 DEFB4AO15263 64 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 Q8N3U1 123 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 CHCHD10Q8WYQ3 142 aaPredicted RBP11.16□□□□□ -0.62
LTBR-201ENST00000228918 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
LTBR-201ENST00000228918 VWFP04275 2813 aa11.15□□□□□ -0.62
LTBR-201ENST00000228918 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
LTBR-201ENST00000228918 COX17Q14061 63 aa11.15□□□□□ -0.62
LTBR-201ENST00000228918 NDUFC2O95298 119 aa11.14□□□□□ -0.63
LTBR-201ENST00000228918 SLPIP03973 132 aa11.14□□□□□ -0.63
LTBR-201ENST00000228918 REG3AQ06141 175 aa11.14□□□□□ -0.63
LTBR-201ENST00000228918 IGHV4-28A0A0C4DH34 117 aa11.14□□□□□ -0.63
LTBR-201ENST00000228918 ANGP03950 147 aaKnown RBP11.14□□□□□ -0.63
LTBR-201ENST00000228918 IGLV10-54A0A075B6I4 117 aa11.13□□□□□ -0.63
LTBR-201ENST00000228918 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
LTBR-201ENST00000228918 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
LTBR-201ENST00000228918 DAD1P61803 113 aa11.12□□□□□ -0.63
LTBR-201ENST00000228918 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
LTBR-201ENST00000228918 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
LTBR-201ENST00000228918 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
LTBR-201ENST00000228918 NCR3O14931 201 aa11.11□□□□□ -0.63
LTBR-201ENST00000228918 APOC4P55056 127 aa11.11□□□□□ -0.63
LTBR-201ENST00000228918 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
LTBR-201ENST00000228918 CYSTM1Q9H1C7 97 aa11.11□□□□□ -0.63
LTBR-201ENST00000228918 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
LTBR-201ENST00000228918 C9orf116Q5BN46 136 aaPredicted RBP11.1□□□□□ -0.63
LTBR-201ENST00000228918 Q8NAQ8 132 aa11.09□□□□□ -0.63
LTBR-201ENST00000228918 Q8N814 137 aa11.08□□□□□ -0.64
LTBR-201ENST00000228918 LINC00846Q9NV44 126 aa11.08□□□□□ -0.64
LTBR-201ENST00000228918 Q6JHZ5 121 aa11.07□□□□□ -0.64
LTBR-201ENST00000228918 Q8NDZ9 215 aa11.07□□□□□ -0.64
LTBR-201ENST00000228918 MIFP14174 115 aa11.07□□□□□ -0.64
LTBR-201ENST00000228918 TMEM258P61165 79 aa11.07□□□□□ -0.64
LTBR-201ENST00000228918 UPK3BQ9BT76 320 aa11.07□□□□□ -0.64
LTBR-201ENST00000228918 SERP2Q8N6R1 65 aa11.06□□□□□ -0.64
LTBR-201ENST00000228918 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
LTBR-201ENST00000228918 LELP1Q5T871 98 aa11.05□□□□□ -0.64
LTBR-201ENST00000228918 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms