RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
GPN3-201ENST00000228827 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
GPN3-201ENST00000228827 MRPL18Q9H0U6 180 aaKnown RBP8.76□□□□□ -1.01
GPN3-201ENST00000228827 GEMIN7Q9H840 131 aaKnown RBP8.76□□□□□ -1.01
GPN3-201ENST00000228827 NDUFC2-KCTD14E9PQ53 114 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 S100A1P23297 94 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 CKS1BP61024 79 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 ODF1Q14990 250 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 RHEBQ15382 184 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 ERASQ7Z444 233 aa8.75□□□□□ -1.01
GPN3-201ENST00000228827 CARHSP1Q9Y2V2 147 aaKnown RBP8.75□□□□□ -1.01
GPN3-201ENST00000228827 SEC11AP67812 179 aa8.74□□□□□ -1.01
GPN3-201ENST00000228827 COX19Q49B96 90 aa8.74□□□□□ -1.01
GPN3-201ENST00000228827 FA2HQ7L5A8 372 aa8.74□□□□□ -1.01
GPN3-201ENST00000228827 Q8IZM0 81 aa8.74□□□□□ -1.01
GPN3-201ENST00000228827 TNXBP22105 4242 aa8.74□□□□□ -1.01
GPN3-201ENST00000228827 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
GPN3-201ENST00000228827 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
GPN3-201ENST00000228827 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
GPN3-201ENST00000228827 LINC00469Q8N7U9 141 aa8.73□□□□□ -1.01
GPN3-201ENST00000228827 LINC01546A6NGU7 62 aa8.72□□□□□ -1.01
GPN3-201ENST00000228827 M0QXV9 152 aa8.72□□□□□ -1.01
GPN3-201ENST00000228827 SMCO4Q9NRQ5 59 aa8.72□□□□□ -1.01
GPN3-201ENST00000228827 UBR4Q5T4S7 5183 aa8.71□□□□□ -1.02
GPN3-201ENST00000228827 UBE2BP63146 152 aa8.7□□□□□ -1.02
GPN3-201ENST00000228827 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
GPN3-201ENST00000228827 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
GPN3-201ENST00000228827 APOC3P02656 99 aa8.7□□□□□ -1.02
GPN3-201ENST00000228827 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
GPN3-201ENST00000228827 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
GPN3-201ENST00000228827 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
GPN3-201ENST00000228827 F8VRH5 84 aa8.69□□□□□ -1.02
GPN3-201ENST00000228827 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
GPN3-201ENST00000228827 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
GPN3-201ENST00000228827 TRAPPC1Q9Y5R8 145 aa8.69□□□□□ -1.02
GPN3-201ENST00000228827 SPINK8P0C7L1 97 aa8.68□□□□□ -1.02
GPN3-201ENST00000228827 PMVKQ15126 192 aa8.68□□□□□ -1.02
GPN3-201ENST00000228827 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
GPN3-201ENST00000228827 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
GPN3-201ENST00000228827 NDUFA6P56556 154 aa8.66□□□□□ -1.02
GPN3-201ENST00000228827 PDZD11Q5EBL8 140 aa8.66□□□□□ -1.02
GPN3-201ENST00000228827 SVBPQ8N300 66 aa8.66□□□□□ -1.02
GPN3-201ENST00000228827 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
GPN3-201ENST00000228827 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
GPN3-201ENST00000228827 A0A096LNJ9 63 aa8.65□□□□□ -1.02
GPN3-201ENST00000228827 CXCL5P42830 114 aa8.65□□□□□ -1.02
GPN3-201ENST00000228827 PMCHL1Q16048 86 aa8.65□□□□□ -1.02
GPN3-201ENST00000228827 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
GPN3-201ENST00000228827 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
GPN3-201ENST00000228827 SNAPINO95295 136 aa8.64□□□□□ -1.03
GPN3-201ENST00000228827 LINC00614P0C842 121 aa8.64□□□□□ -1.03
GPN3-201ENST00000228827 H0Y9J4 135 aa8.64□□□□□ -1.03
GPN3-201ENST00000228827 RAB5BP61020 215 aa8.64□□□□□ -1.03
GPN3-201ENST00000228827 H3BRM9 83 aa8.63□□□□□ -1.03
GPN3-201ENST00000228827 HBDP02042 147 aa8.63□□□□□ -1.03
GPN3-201ENST00000228827 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
GPN3-201ENST00000228827 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
GPN3-201ENST00000228827 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
GPN3-201ENST00000228827 LBHQ53QV2 105 aaPredicted RBP8.6□□□□□ -1.03
GPN3-201ENST00000228827 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
GPN3-201ENST00000228827 ATP5LO75964 103 aa8.58□□□□□ -1.04
GPN3-201ENST00000228827 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
GPN3-201ENST00000228827 IGLV5-39A0A0G2JS06 123 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 GAGE10A6NGK3 116 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 RPL37AP8A6NKH3 93 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 NUPR1O60356 82 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 PFN2P35080 140 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
GPN3-201ENST00000228827 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
GPN3-201ENST00000228827 ZNF861PO60384 105 aa8.56□□□□□ -1.04
GPN3-201ENST00000228827 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
GPN3-201ENST00000228827 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
GPN3-201ENST00000228827 LINC00167Q96N53 147 aa8.56□□□□□ -1.04
GPN3-201ENST00000228827 CBLN2Q8IUK8 224 aa8.55□□□□□ -1.04
GPN3-201ENST00000228827 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
GPN3-201ENST00000228827 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
GPN3-201ENST00000228827 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
GPN3-201ENST00000228827 LRP2P98164 4655 aa8.54□□□□□ -1.04
GPN3-201ENST00000228827 BCE1O60756 84 aa8.53□□□□□ -1.04
GPN3-201ENST00000228827 SCO1O75880 301 aa8.53□□□□□ -1.04
GPN3-201ENST00000228827 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
GPN3-201ENST00000228827 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
GPN3-201ENST00000228827 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
GPN3-201ENST00000228827 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
GPN3-201ENST00000228827 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
GPN3-201ENST00000228827 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
GPN3-201ENST00000228827 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
GPN3-201ENST00000228827 IGKV2-28A0A075B6P5 120 aa8.5□□□□□ -1.05
GPN3-201ENST00000228827 IGKV2D-28P01615 120 aa8.5□□□□□ -1.05
GPN3-201ENST00000228827 FAM19A2Q8N3H0 131 aa8.5□□□□□ -1.05
GPN3-201ENST00000228827 LCE2BO14633 110 aa8.49□□□□□ -1.05
GPN3-201ENST00000228827 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
GPN3-201ENST00000228827 TMEM223A0PJW6 202 aa8.48□□□□□ -1.05
GPN3-201ENST00000228827 HSBP1O75506 76 aa8.48□□□□□ -1.05
GPN3-201ENST00000228827 TRGC2P03986 189 aa8.48□□□□□ -1.05
GPN3-201ENST00000228827 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
GPN3-201ENST00000228827 COX17Q14061 63 aa8.48□□□□□ -1.05
GPN3-201ENST00000228827 A0A0U1RRA0 63 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms