RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 CHAC1Q9BUX1 264 aa4.38□□□□□ -1.71
CCL1-201ENST00000225842 CARHSP1Q9Y2V2 147 aaKnown RBP4.38□□□□□ -1.71
CCL1-201ENST00000225842 TRBV6-5A0A0K0K1A5 114 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 SDHAF1A6NFY7 115 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 K7EMI3 77 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 ZNF25P17030 456 aaPredicted RBP4.37□□□□□ -1.71
CCL1-201ENST00000225842 IQCJQ1A5X6 159 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 Q6ZRN7 208 aaPredicted RBP4.37□□□□□ -1.71
CCL1-201ENST00000225842 ORMDL3Q8N138 153 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 C20orf78Q9BR46 151 aa4.37□□□□□ -1.71
CCL1-201ENST00000225842 A0A087WTM6 91 aa4.36□□□□□ -1.71
CCL1-201ENST00000225842 APOC3P02656 99 aa4.36□□□□□ -1.71
CCL1-201ENST00000225842 ANGP03950 147 aaKnown RBP4.36□□□□□ -1.71
CCL1-201ENST00000225842 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
CCL1-201ENST00000225842 MRPL54Q6P161 138 aaKnown RBP4.36□□□□□ -1.71
CCL1-201ENST00000225842 NIT1Q86X76 327 aa4.36□□□□□ -1.71
CCL1-201ENST00000225842 WFDC10BQ8IUB3 73 aa4.36□□□□□ -1.71
CCL1-201ENST00000225842 TRAV8-4A0A0B4J246 113 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 TRBV27A0A0K0K1C4 114 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 IBA57-AS1B1ANH7 110 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 MIAQ16674 131 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 C10orf91Q5T1B1 145 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 AMN1Q8IY45 258 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 GATD1Q8NB37 220 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 PKHD1L1Q86WI1 4243 aa4.35□□□□□ -1.71
CCL1-201ENST00000225842 TRBV24-1A0A075B6N3 115 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 TRAV26-2A0A0B4J265 109 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 C7orf77A4D0Y5 90 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 D6R8Y8 96 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 PANO1I0J062 215 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 CCL25O15444 150 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 IGHV3-33P01772 117 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 IGHV3-30-3P0DP02 117 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 TMEM136Q6ZRR5 245 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 GNB1LQ9BYB4 327 aa4.34□□□□□ -1.71
CCL1-201ENST00000225842 NXT2Q9NPJ8 142 aaKnown RBP4.34□□□□□ -1.71
CCL1-201ENST00000225842 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 MUC2Q02817 5179 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 H0Y9J4 135 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 ADCYAP1P18509 176 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
CCL1-201ENST00000225842 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 Q8N976 141 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 PRELID3AQ96N28 172 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 KLK12Q9UKR0 248 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
CCL1-201ENST00000225842 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 FAM240AA0A1B0GVK7 77 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 POLR2KP53803 58 aaKnown RBP4.32□□□□□ -1.72
CCL1-201ENST00000225842 OR5A1Q8NGJ0 315 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 UBE2WQ96B02 151 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 RPL39LQ96EH5 51 aaKnown RBP4.32□□□□□ -1.72
CCL1-201ENST00000225842 SMIM2Q9BVW6 85 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 SMCO4Q9NRQ5 59 aa4.32□□□□□ -1.72
CCL1-201ENST00000225842 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 IFI27P40305 119 aaPredicted RBP4.31□□□□□ -1.72
CCL1-201ENST00000225842 RAB5BP61020 215 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 RBX1P62877 108 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 SS18Q15532 418 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 MPV17L2Q567V2 206 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 MRPL52Q86TS9 123 aaKnown RBP4.31□□□□□ -1.72
CCL1-201ENST00000225842 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
CCL1-201ENST00000225842 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 FGF6P10767 208 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 KRTAP10-4P60372 401 aaPredicted RBP4.3□□□□□ -1.72
CCL1-201ENST00000225842 FABP9Q0Z7S8 132 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 SLC7A5P1Q8MH63 180 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 LINC00269Q8N2A0 174 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 C2orf88Q9BSF0 95 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
CCL1-201ENST00000225842 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.29□□□□□ -1.72
CCL1-201ENST00000225842 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 C1orf196B1AJZ1 125 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 NPYP01303 97 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 ESDP10768 282 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 SEC11AP67812 179 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 FAM19A1Q7Z5A9 133 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 Q8N8P6 123 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 TRAPPC1Q9Y5R8 145 aa4.29□□□□□ -1.72
CCL1-201ENST00000225842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
CCL1-201ENST00000225842 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
CCL1-201ENST00000225842 APOMO95445 188 aa4.28□□□□□ -1.72
CCL1-201ENST00000225842 C6orf99Q4VX62 202 aa4.28□□□□□ -1.72
CCL1-201ENST00000225842 ZNF664Q8N3J9 261 aa4.28□□□□□ -1.72
CCL1-201ENST00000225842 CAMK2N2Q96S95 79 aa4.28□□□□□ -1.72
CCL1-201ENST00000225842 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms