RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 LINC01561Q8N1V8 128 aa12.42□□□□□ -0.42
SLC22A4-201ENST00000200652 SIGMAR1Q99720 223 aa12.42□□□□□ -0.42
SLC22A4-201ENST00000200652 KRTAP24-1Q3LI83 254 aa12.42□□□□□ -0.42
SLC22A4-201ENST00000200652 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
SLC22A4-201ENST00000200652 Q8IZM0 81 aa12.41□□□□□ -0.42
SLC22A4-201ENST00000200652 C11orf68Q9H3H3 251 aaKnown RBP12.41□□□□□ -0.42
SLC22A4-201ENST00000200652 SND1-IT1Q9HBX3 110 aa12.41□□□□□ -0.42
SLC22A4-201ENST00000200652 PFN2P35080 140 aa12.41□□□□□ -0.42
SLC22A4-201ENST00000200652 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
SLC22A4-201ENST00000200652 COX7A2LO14548 114 aa12.4□□□□□ -0.42
SLC22A4-201ENST00000200652 CCL18P55774 89 aa12.4□□□□□ -0.42
SLC22A4-201ENST00000200652 REG3AQ06141 175 aa12.4□□□□□ -0.42
SLC22A4-201ENST00000200652 CD164L2Q6UWJ8 174 aa12.4□□□□□ -0.42
SLC22A4-201ENST00000200652 C2orf82Q6UX34 121 aa12.39□□□□□ -0.43
SLC22A4-201ENST00000200652 CHCHD10Q8WYQ3 142 aaPredicted RBP12.39□□□□□ -0.43
SLC22A4-201ENST00000200652 IGKV2-28A0A075B6P5 120 aa12.39□□□□□ -0.43
SLC22A4-201ENST00000200652 TRAV13-2A0A0B4J235 113 aa12.39□□□□□ -0.43
SLC22A4-201ENST00000200652 IGKV2D-28P01615 120 aa12.39□□□□□ -0.43
SLC22A4-201ENST00000200652 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
SLC22A4-201ENST00000200652 LELP1Q5T871 98 aa12.38□□□□□ -0.43
SLC22A4-201ENST00000200652 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
SLC22A4-201ENST00000200652 IGLV10-54A0A075B6I4 117 aa12.38□□□□□ -0.43
SLC22A4-201ENST00000200652 H3BT86 120 aa12.38□□□□□ -0.43
SLC22A4-201ENST00000200652 CRPP02741 224 aa12.37□□□□□ -0.43
SLC22A4-201ENST00000200652 RETNQ9HD89 108 aa12.37□□□□□ -0.43
SLC22A4-201ENST00000200652 KIAA0087Q14695 138 aa12.36□□□□□ -0.43
SLC22A4-201ENST00000200652 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
SLC22A4-201ENST00000200652 EGFEM1PQ0D2K5 195 aa12.35□□□□□ -0.43
SLC22A4-201ENST00000200652 RPL28P46779 137 aaKnown RBP12.34□□□□□ -0.43
SLC22A4-201ENST00000200652 CKS1BP61024 79 aa12.34□□□□□ -0.43
SLC22A4-201ENST00000200652 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
SLC22A4-201ENST00000200652 C3orf56Q8N813 242 aa12.33□□□□□ -0.44
SLC22A4-201ENST00000200652 MALP21145 153 aa12.33□□□□□ -0.44
SLC22A4-201ENST00000200652 LYPD5Q6UWN5 251 aa12.32□□□□□ -0.44
SLC22A4-201ENST00000200652 CFAP161Q6P656 301 aa12.31□□□□□ -0.44
SLC22A4-201ENST00000200652 FAM218AQ96MZ4 157 aa12.31□□□□□ -0.44
SLC22A4-201ENST00000200652 CXCL5P42830 114 aa12.3□□□□□ -0.44
SLC22A4-201ENST00000200652 TRACP01848 142 aa12.3□□□□□ -0.44
SLC22A4-201ENST00000200652 SMIM11BQ8TCY0 68 aa12.3□□□□□ -0.44
SLC22A4-201ENST00000200652 PRR34Q9NV39 138 aa12.3□□□□□ -0.44
SLC22A4-201ENST00000200652 KLK12Q9UKR0 248 aa12.3□□□□□ -0.44
SLC22A4-201ENST00000200652 SCGB1A1P11684 91 aa12.28□□□□□ -0.44
SLC22A4-201ENST00000200652 XGP55808 180 aa12.27□□□□□ -0.44
SLC22A4-201ENST00000200652 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.44
SLC22A4-201ENST00000200652 H3BNG1 76 aa12.27□□□□□ -0.45
SLC22A4-201ENST00000200652 COX17Q14061 63 aa12.27□□□□□ -0.45
SLC22A4-201ENST00000200652 ENHOQ6UWT2 76 aa12.27□□□□□ -0.45
SLC22A4-201ENST00000200652 FBN1P35555 2871 aaKnown RBP12.26□□□□□ -0.45
SLC22A4-201ENST00000200652 KPRPQ5T749 579 aaPredicted RBP12.26□□□□□ -0.45
SLC22A4-201ENST00000200652 Q6ZTC4 211 aa12.26□□□□□ -0.45
SLC22A4-201ENST00000200652 KLK5Q9Y337 293 aaPredicted RBP12.26□□□□□ -0.45
SLC22A4-201ENST00000200652 TRAV8-4A0A0B4J246 113 aa12.26□□□□□ -0.45
SLC22A4-201ENST00000200652 MT-ATP8P03928 68 aa12.26□□□□□ -0.45
SLC22A4-201ENST00000200652 FLNBO75369 2602 aaKnown RBP12.25□□□□□ -0.45
SLC22A4-201ENST00000200652 C9orf116Q5BN46 136 aaPredicted RBP12.25□□□□□ -0.45
SLC22A4-201ENST00000200652 DEFB121Q5J5C9 76 aa12.25□□□□□ -0.45
SLC22A4-201ENST00000200652 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
SLC22A4-201ENST00000200652 BAALC-AS2P0C853 105 aa12.23□□□□□ -0.45
SLC22A4-201ENST00000200652 C6orf223Q8N319 242 aa12.23□□□□□ -0.45
SLC22A4-201ENST00000200652 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
SLC22A4-201ENST00000200652 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
SLC22A4-201ENST00000200652 H0YGX0 51 aa12.21□□□□□ -0.45
SLC22A4-201ENST00000200652 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
SLC22A4-201ENST00000200652 Q9HAA7 133 aa12.21□□□□□ -0.45
SLC22A4-201ENST00000200652 ANK2Q01484 3957 aa12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 STAB1Q9NY15 2570 aa12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 A0A087WYN8 130 aa12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 A0A0J9YWU9 116 aa12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 PRR3P79522 188 aaKnown RBP12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.46
SLC22A4-201ENST00000200652 NDUFC2O95298 119 aa12.2□□□□□ -0.46
SLC22A4-201ENST00000200652 C22orf24Q9Y442 160 aa12.2□□□□□ -0.46
SLC22A4-201ENST00000200652 PKD1L1Q8TDX9 2849 aa12.19□□□□□ -0.46
SLC22A4-201ENST00000200652 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
SLC22A4-201ENST00000200652 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
SLC22A4-201ENST00000200652 ESRGQ1W209 222 aa12.17□□□□□ -0.46
SLC22A4-201ENST00000200652 DNAH3Q8TD57 4116 aa12.16□□□□□ -0.46
SLC22A4-201ENST00000200652 Q8NDZ9 215 aa12.15□□□□□ -0.46
SLC22A4-201ENST00000200652 C11orf45Q8TAV5 145 aa12.15□□□□□ -0.46
SLC22A4-201ENST00000200652 DEFB131BA0A096LNP1 70 aa12.15□□□□□ -0.46
SLC22A4-201ENST00000200652 DNAL4O96015 105 aa12.15□□□□□ -0.46
SLC22A4-201ENST00000200652 FAM240AA0A1B0GVK7 77 aa12.14□□□□□ -0.47
SLC22A4-201ENST00000200652 LECT2O14960 151 aa12.14□□□□□ -0.47
SLC22A4-201ENST00000200652 MUC7Q8TAX7 377 aa12.14□□□□□ -0.47
SLC22A4-201ENST00000200652 KRTAP26-1Q6PEX3 210 aa12.13□□□□□ -0.47
SLC22A4-201ENST00000200652 TMEM126AQ9H061 195 aa12.13□□□□□ -0.47
SLC22A4-201ENST00000200652 TENM3Q9P273 2699 aa12.13□□□□□ -0.47
SLC22A4-201ENST00000200652 GVQW2A0A096LPI5 108 aaPredicted RBP12.12□□□□□ -0.47
SLC22A4-201ENST00000200652 NCR3O14931 201 aa12.11□□□□□ -0.47
SLC22A4-201ENST00000200652 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
SLC22A4-201ENST00000200652 C6orf48Q9UBA6 75 aa12.11□□□□□ -0.47
SLC22A4-201ENST00000200652 SNCGO76070 127 aa12.1□□□□□ -0.47
SLC22A4-201ENST00000200652 MAST4O15021 2626 aa12.09□□□□□ -0.47
SLC22A4-201ENST00000200652 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
SLC22A4-201ENST00000200652 SLPIP03973 132 aa12.07□□□□□ -0.48
SLC22A4-201ENST00000200652 HIGD2BQ4VC39 106 aa12.07□□□□□ -0.48
SLC22A4-201ENST00000200652 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
SLC22A4-201ENST00000200652 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
SLC22A4-201ENST00000200652 ACYP1P07311 99 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms