RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
CTSA-201ENST00000191018 SOSTDC1Q6X4U4 206 aa12.59□□□□□ -0.39
CTSA-201ENST00000191018 C6orf226Q5I0X4 101 aa12.59□□□□□ -0.39
CTSA-201ENST00000191018 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
CTSA-201ENST00000191018 KIAA0087Q14695 138 aa12.58□□□□□ -0.4
CTSA-201ENST00000191018 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
CTSA-201ENST00000191018 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
CTSA-201ENST00000191018 C15orf53Q8NAA6 179 aa12.56□□□□□ -0.4
CTSA-201ENST00000191018 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
CTSA-201ENST00000191018 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
CTSA-201ENST00000191018 MALP21145 153 aa12.55□□□□□ -0.4
CTSA-201ENST00000191018 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
CTSA-201ENST00000191018 LOC107984156A0A0G2JMH3 177 aa12.54□□□□□ -0.4
CTSA-201ENST00000191018 CRPP02741 224 aa12.54□□□□□ -0.4
CTSA-201ENST00000191018 ARL17AQ8IVW1 177 aa12.54□□□□□ -0.4
CTSA-201ENST00000191018 UBE2WQ96B02 151 aa12.54□□□□□ -0.4
CTSA-201ENST00000191018 CXCL5P42830 114 aa12.53□□□□□ -0.4
CTSA-201ENST00000191018 LINC01556Q5JQF7 62 aa12.53□□□□□ -0.4
CTSA-201ENST00000191018 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
CTSA-201ENST00000191018 C2orf82Q6UX34 121 aa12.53□□□□□ -0.4
CTSA-201ENST00000191018 KLK5Q9Y337 293 aaPredicted RBP12.53□□□□□ -0.4
CTSA-201ENST00000191018 H3BMG7 143 aa12.52□□□□□ -0.41
CTSA-201ENST00000191018 LINC00158P58513 81 aa12.52□□□□□ -0.41
CTSA-201ENST00000191018 CKS1BP61024 79 aa12.51□□□□□ -0.41
CTSA-201ENST00000191018 H7C2G1 150 aa12.51□□□□□ -0.41
CTSA-201ENST00000191018 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
CTSA-201ENST00000191018 B9D2Q9BPU9 175 aa12.51□□□□□ -0.41
CTSA-201ENST00000191018 TRBV30A0A0K0K1B3 111 aa12.5□□□□□ -0.41
CTSA-201ENST00000191018 KRTAP26-1Q6PEX3 210 aa12.5□□□□□ -0.41
CTSA-201ENST00000191018 PFN2P35080 140 aa12.49□□□□□ -0.41
CTSA-201ENST00000191018 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
CTSA-201ENST00000191018 TRBV20-1A0A075B6N2 111 aa12.48□□□□□ -0.41
CTSA-201ENST00000191018 DNAH10OSP0CZ25 163 aa12.48□□□□□ -0.41
CTSA-201ENST00000191018 Q1RN00 199 aa12.48□□□□□ -0.41
CTSA-201ENST00000191018 RPL13AP40429 203 aaKnown RBP12.48□□□□□ -0.41
CTSA-201ENST00000191018 PSMB2P49721 201 aa12.48□□□□□ -0.41
CTSA-201ENST00000191018 COL7A1Q02388 2944 aa12.48□□□□□ -0.41
CTSA-201ENST00000191018 TCL1BO95988 128 aa12.47□□□□□ -0.41
CTSA-201ENST00000191018 F8W1H4 67 aa12.46□□□□□ -0.41
CTSA-201ENST00000191018 TRIAP1O43715 76 aa12.46□□□□□ -0.41
CTSA-201ENST00000191018 CCL18P55774 89 aa12.46□□□□□ -0.41
CTSA-201ENST00000191018 SPAG11BQ08648 103 aa12.46□□□□□ -0.41
CTSA-201ENST00000191018 PRO0461Q9UI25 63 aa12.46□□□□□ -0.41
CTSA-201ENST00000191018 LINC00588Q9Y4M8 146 aa12.46□□□□□ -0.41
CTSA-201ENST00000191018 SCGB1C2P0DMR2 95 aa12.46□□□□□ -0.42
CTSA-201ENST00000191018 COX17Q14061 63 aa12.46□□□□□ -0.42
CTSA-201ENST00000191018 SND1-IT1Q9HBX3 110 aa12.45□□□□□ -0.42
CTSA-201ENST00000191018 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
CTSA-201ENST00000191018 IGKV2-28A0A075B6P5 120 aa12.42□□□□□ -0.42
CTSA-201ENST00000191018 IGKV2D-28P01615 120 aa12.42□□□□□ -0.42
CTSA-201ENST00000191018 C10orf25Q5T742 122 aa12.42□□□□□ -0.42
CTSA-201ENST00000191018 WFDC2Q14508 124 aa12.41□□□□□ -0.42
CTSA-201ENST00000191018 UNQ6190/PRO20217Q6UXQ8 127 aa12.41□□□□□ -0.42
CTSA-201ENST00000191018 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
CTSA-201ENST00000191018 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
CTSA-201ENST00000191018 C1orf43Q9BWL3 253 aa12.41□□□□□ -0.42
CTSA-201ENST00000191018 TRAV13-2A0A0B4J235 113 aa12.4□□□□□ -0.42
CTSA-201ENST00000191018 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.42
CTSA-201ENST00000191018 UPK3BQ9BT76 320 aa12.4□□□□□ -0.42
CTSA-201ENST00000191018 MTURNQ8N3F0 131 aa12.4□□□□□ -0.42
CTSA-201ENST00000191018 LINC00337Q8N6G1 96 aa12.4□□□□□ -0.42
CTSA-201ENST00000191018 GVQW2A0A096LPI5 108 aaPredicted RBP12.39□□□□□ -0.43
CTSA-201ENST00000191018 COX6CP09669 75 aa12.39□□□□□ -0.43
CTSA-201ENST00000191018 STAB2Q8WWQ8 2551 aa12.38□□□□□ -0.43
CTSA-201ENST00000191018 OCIAD2Q56VL3 154 aa12.38□□□□□ -0.43
CTSA-201ENST00000191018 MUC7Q8TAX7 377 aa12.38□□□□□ -0.43
CTSA-201ENST00000191018 SMCPP49901 116 aaPredicted RBP12.38□□□□□ -0.43
CTSA-201ENST00000191018 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
CTSA-201ENST00000191018 IGKV2D-24A0A075B6R9 120 aa12.36□□□□□ -0.43
CTSA-201ENST00000191018 NHLRC4P0CG21 123 aaPredicted RBP12.36□□□□□ -0.43
CTSA-201ENST00000191018 ATXN8Q156A1 80 aa12.36□□□□□ -0.43
CTSA-201ENST00000191018 ZNF561-AS1K7EIQ3 104 aa12.34□□□□□ -0.43
CTSA-201ENST00000191018 NDUFC2O95298 119 aa12.34□□□□□ -0.43
CTSA-201ENST00000191018 C6orf48Q9UBA6 75 aa12.34□□□□□ -0.43
CTSA-201ENST00000191018 HIGD2BQ4VC39 106 aa12.34□□□□□ -0.43
CTSA-201ENST00000191018 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.44
CTSA-201ENST00000191018 C2orf48Q96LS8 159 aa12.33□□□□□ -0.44
CTSA-201ENST00000191018 Q9HAA7 133 aa12.33□□□□□ -0.44
CTSA-201ENST00000191018 LST1O00453 97 aa12.32□□□□□ -0.44
CTSA-201ENST00000191018 ETDBQ3ZM63 59 aa12.32□□□□□ -0.44
CTSA-201ENST00000191018 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
CTSA-201ENST00000191018 CLEC2BQ92478 149 aa12.32□□□□□ -0.44
CTSA-201ENST00000191018 APLNQ9ULZ1 77 aa12.31□□□□□ -0.44
CTSA-201ENST00000191018 CAMK2N2Q96S95 79 aa12.31□□□□□ -0.44
CTSA-201ENST00000191018 C9JAW5 83 aa12.3□□□□□ -0.44
CTSA-201ENST00000191018 K7ERU9 68 aa12.3□□□□□ -0.44
CTSA-201ENST00000191018 DYNC2H1Q8NCM8 4307 aaKnown RBP12.3□□□□□ -0.44
CTSA-201ENST00000191018 DNAH1Q9P2D7 4330 aa12.3□□□□□ -0.44
CTSA-201ENST00000191018 M0QXV9 152 aa12.29□□□□□ -0.44
CTSA-201ENST00000191018 SLC25A20O43772 301 aa12.29□□□□□ -0.44
CTSA-201ENST00000191018 F8WDY8 70 aa12.29□□□□□ -0.44
CTSA-201ENST00000191018 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
CTSA-201ENST00000191018 LINC01600Q96MT4 127 aa12.29□□□□□ -0.44
CTSA-201ENST00000191018 DNHD1Q96M86 4753 aa12.29□□□□□ -0.44
CTSA-201ENST00000191018 Q6ZRU5 148 aa12.28□□□□□ -0.44
CTSA-201ENST00000191018 Q8NDZ9 215 aa12.28□□□□□ -0.44
CTSA-201ENST00000191018 PRR3P79522 188 aaKnown RBP12.27□□□□□ -0.45
CTSA-201ENST00000191018 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
CTSA-201ENST00000191018 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
CTSA-201ENST00000191018 RMI2Q96E14 147 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms