RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 PACRGQ96M98 296 aaPredicted RBP17.28■□□□□ 0.36
PDCD2-201ENST00000167218 LINC01600Q96MT4 127 aa17.28■□□□□ 0.36
PDCD2-201ENST00000167218 GEMIN7Q9H840 131 aaKnown RBP17.28■□□□□ 0.36
PDCD2-201ENST00000167218 APOC3P02656 99 aa17.27■□□□□ 0.36
PDCD2-201ENST00000167218 PRSS2P07478 247 aa17.27■□□□□ 0.36
PDCD2-201ENST00000167218 FA2HQ7L5A8 372 aa17.27■□□□□ 0.36
PDCD2-201ENST00000167218 C6orf226Q5I0X4 101 aa17.25■□□□□ 0.35
PDCD2-201ENST00000167218 CST9LQ9H4G1 147 aa17.25■□□□□ 0.35
PDCD2-201ENST00000167218 TINCRA0A1B0GVN0 87 aa17.24■□□□□ 0.35
PDCD2-201ENST00000167218 CKS1BP61024 79 aa17.24■□□□□ 0.35
PDCD2-201ENST00000167218 C9orf129Q5T035 196 aaKnown RBP17.24■□□□□ 0.35
PDCD2-201ENST00000167218 KRTAP11-1Q8IUC1 163 aa17.24■□□□□ 0.35
PDCD2-201ENST00000167218 URB1-AS1Q96HZ7 61 aa17.24■□□□□ 0.35
PDCD2-201ENST00000167218 SMCO4Q9NRQ5 59 aa17.24■□□□□ 0.35
PDCD2-201ENST00000167218 IGLV5-45A0A087WSX0 123 aa17.23■□□□□ 0.35
PDCD2-201ENST00000167218 FAM19A5Q7Z5A7 132 aaPredicted RBP17.23■□□□□ 0.35
PDCD2-201ENST00000167218 TRAPPC1Q9Y5R8 145 aa17.23■□□□□ 0.35
PDCD2-201ENST00000167218 A0A096LNJ9 63 aa17.22■□□□□ 0.35
PDCD2-201ENST00000167218 LINC00469Q8N7U9 141 aa17.22■□□□□ 0.35
PDCD2-201ENST00000167218 C18orf32Q8TCD1 76 aa17.22■□□□□ 0.35
PDCD2-201ENST00000167218 SMIM1B2RUZ4 78 aa17.21■□□□□ 0.35
PDCD2-201ENST00000167218 SVBPQ8N300 66 aa17.21■□□□□ 0.35
PDCD2-201ENST00000167218 SNAPINO95295 136 aa17.2■□□□□ 0.34
PDCD2-201ENST00000167218 PMVKQ15126 192 aa17.2■□□□□ 0.34
PDCD2-201ENST00000167218 C1orf137Q5JT78 98 aa17.19■□□□□ 0.34
PDCD2-201ENST00000167218 NDUFA5Q16718 116 aa17.18■□□□□ 0.34
PDCD2-201ENST00000167218 REG3GQ6UW15 175 aa17.18■□□□□ 0.34
PDCD2-201ENST00000167218 F8VRH5 84 aa17.17■□□□□ 0.34
PDCD2-201ENST00000167218 PDZD11Q5EBL8 140 aa17.17■□□□□ 0.34
PDCD2-201ENST00000167218 LINC00614P0C842 121 aa17.16■□□□□ 0.34
PDCD2-201ENST00000167218 KRTAP10-8P60410 259 aa17.16■□□□□ 0.34
PDCD2-201ENST00000167218 YPEL4Q96NS1 127 aa17.16■□□□□ 0.34
PDCD2-201ENST00000167218 PLA2G2DQ9UNK4 145 aa17.16■□□□□ 0.34
PDCD2-201ENST00000167218 M0QXV9 152 aa17.15■□□□□ 0.34
PDCD2-201ENST00000167218 CXCL5P42830 114 aa17.14■□□□□ 0.33
PDCD2-201ENST00000167218 COX7B2Q8TF08 81 aa17.13■□□□□ 0.33
PDCD2-201ENST00000167218 IGLV7-43P04211 117 aa17.12■□□□□ 0.33
PDCD2-201ENST00000167218 SPINK8P0C7L1 97 aa17.11■□□□□ 0.33
PDCD2-201ENST00000167218 XAGE1AQ9HD64 81 aa17.11■□□□□ 0.33
PDCD2-201ENST00000167218 HBDP02042 147 aa17.1■□□□□ 0.33
PDCD2-201ENST00000167218 IGLC3P0DOY3 106 aa17.1■□□□□ 0.33
PDCD2-201ENST00000167218 PMCHL1Q16048 86 aa17.1■□□□□ 0.33
PDCD2-201ENST00000167218 ODF1Q14990 250 aa17.08■□□□□ 0.32
PDCD2-201ENST00000167218 UBR4Q5T4S7 5183 aa17.08■□□□□ 0.32
PDCD2-201ENST00000167218 UBE2BP63146 152 aa17.06■□□□□ 0.32
PDCD2-201ENST00000167218 C22orf24Q9Y442 160 aa17.06■□□□□ 0.32
PDCD2-201ENST00000167218 NDUFA6P56556 154 aa17.05■□□□□ 0.32
PDCD2-201ENST00000167218 RAB5BP61020 215 aa17.05■□□□□ 0.32
PDCD2-201ENST00000167218 H3BRM9 83 aa17.04■□□□□ 0.32
PDCD2-201ENST00000167218 IGLV5-39A0A0G2JS06 123 aa17.03■□□□□ 0.32
PDCD2-201ENST00000167218 ZNF22P17026 224 aaPredicted RBP17.03■□□□□ 0.32
PDCD2-201ENST00000167218 DIRC1Q969H9 104 aa17.02■□□□□ 0.32
PDCD2-201ENST00000167218 ATP5LO75964 103 aa17.01■□□□□ 0.31
PDCD2-201ENST00000167218 H0Y9J4 135 aa17■□□□□ 0.31
PDCD2-201ENST00000167218 BAGE3Q86Y29 109 aa16.98■□□□□ 0.31
PDCD2-201ENST00000167218 CBLN2Q8IUK8 224 aa16.98■□□□□ 0.31
PDCD2-201ENST00000167218 TP73-AS1Q9UF72 201 aa16.98■□□□□ 0.31
PDCD2-201ENST00000167218 C11orf86A6NJI1 115 aa16.97■□□□□ 0.31
PDCD2-201ENST00000167218 LBHQ53QV2 105 aaPredicted RBP16.97■□□□□ 0.31
PDCD2-201ENST00000167218 CHCHD1Q96BP2 118 aaKnown RBP16.96■□□□□ 0.31
PDCD2-201ENST00000167218 MRPL55Q7Z7F7 128 aaKnown RBP16.95■□□□□ 0.3
PDCD2-201ENST00000167218 LRP2P98164 4655 aa16.93■□□□□ 0.3
PDCD2-201ENST00000167218 KRTAP1-4P0C5Y4 121 aa16.92■□□□□ 0.3
PDCD2-201ENST00000167218 NUPR1O60356 82 aa16.91■□□□□ 0.3
PDCD2-201ENST00000167218 IGLV5-37A0A075B6J1 123 aa16.9■□□□□ 0.3
PDCD2-201ENST00000167218 PRR26Q8N8Z3 221 aa16.9■□□□□ 0.3
PDCD2-201ENST00000167218 CHTOPQ9Y3Y2 248 aaKnown RBP16.9■□□□□ 0.3
PDCD2-201ENST00000167218 TMEM170BQ5T4T1 132 aa16.89■□□□□ 0.29
PDCD2-201ENST00000167218 SLC7A5P1Q8MH63 180 aa16.89■□□□□ 0.29
PDCD2-201ENST00000167218 LINC00167Q96N53 147 aa16.89■□□□□ 0.29
PDCD2-201ENST00000167218 ZNF861PO60384 105 aa16.88■□□□□ 0.29
PDCD2-201ENST00000167218 IFI27L1Q96BM0 104 aa16.88■□□□□ 0.29
PDCD2-201ENST00000167218 TRAV12-1A0A0B4J245 112 aa16.87■□□□□ 0.29
PDCD2-201ENST00000167218 PFN2P35080 140 aa16.87■□□□□ 0.29
PDCD2-201ENST00000167218 ERG28Q9UKR5 140 aa16.86■□□□□ 0.29
PDCD2-201ENST00000167218 TRGC2P03986 189 aa16.85■□□□□ 0.29
PDCD2-201ENST00000167218 RPL37AP8A6NKH3 93 aa16.84■□□□□ 0.29
PDCD2-201ENST00000167218 ZNF625Q96I27 306 aaPredicted RBP16.84■□□□□ 0.29
PDCD2-201ENST00000167218 FAM19A2Q8N3H0 131 aa16.83■□□□□ 0.28
PDCD2-201ENST00000167218 TMEM223A0PJW6 202 aa16.82■□□□□ 0.28
PDCD2-201ENST00000167218 GAGE10A6NGK3 116 aa16.82■□□□□ 0.28
PDCD2-201ENST00000167218 BCE1O60756 84 aa16.82■□□□□ 0.28
PDCD2-201ENST00000167218 COX17Q14061 63 aa16.82■□□□□ 0.28
PDCD2-201ENST00000167218 SND1-IT1Q9HBX3 110 aa16.82■□□□□ 0.28
PDCD2-201ENST00000167218 IGLV1-50A0A075B6I6 118 aa16.81■□□□□ 0.28
PDCD2-201ENST00000167218 HSBP1O75506 76 aa16.81■□□□□ 0.28
PDCD2-201ENST00000167218 LINC00310P59036 64 aa16.81■□□□□ 0.28
PDCD2-201ENST00000167218 SFTA2Q6UW10 78 aa16.8■□□□□ 0.28
PDCD2-201ENST00000167218 SCO1O75880 301 aa16.79■□□□□ 0.28
PDCD2-201ENST00000167218 NKAPP1Q8N9T2 125 aa16.79■□□□□ 0.28
PDCD2-201ENST00000167218 VPREB1P12018 145 aa16.78■□□□□ 0.28
PDCD2-201ENST00000167218 Q8NDZ9 215 aa16.76■□□□□ 0.27
PDCD2-201ENST00000167218 COLCA2A8K830 154 aa16.75■□□□□ 0.27
PDCD2-201ENST00000167218 RPL28P46779 137 aaKnown RBP16.75■□□□□ 0.27
PDCD2-201ENST00000167218 SERF1AO75920 110 aa16.74■□□□□ 0.27
PDCD2-201ENST00000167218 KRTAP13-1Q8IUC0 172 aa16.73■□□□□ 0.27
PDCD2-201ENST00000167218 IGKV2-28A0A075B6P5 120 aa16.71■□□□□ 0.27
PDCD2-201ENST00000167218 IGKV2D-28P01615 120 aa16.71■□□□□ 0.27
PDCD2-201ENST00000167218 RPL24P83731 157 aaKnown RBP16.7■□□□□ 0.26
PDCD2-201ENST00000167218 LEPROTL1O95214 131 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms