RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Zfp708F8VPP0 541 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Gm5225J3QPL3 108 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 SncaO55042 140 aaKnown RBP6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 P01680 129 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Defa6P50704 93 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Defa16P50714 93 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Rps23P62267 143 aaKnown RBP6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Srsf3P84104 164 aaKnown RBP6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Defa24Q5G865 93 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 A730049H05RikQ8C940 139 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Mmd2Q8R189 247 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Olfr497Q8VG08 314 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 PmvkQ9D1G2 192 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Rnase10Q9D5A9 208 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Bod1lE9Q6J5 3032 aa6.97□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Defa35E9QLQ1 93 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Defa5P28312 93 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 D130052B06RikQ3UW13 202 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Prss58Q8BW11 241 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 TdhQ8K3F7 373 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Vmn1r211Q8R266 298 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Chac1Q8R3J5 223 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 DapQ91XC8 102 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Scgb3a2Q920H1 91 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Lin37Q9D8N6 246 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 Sec11aQ9R0P6 179 aa6.96□□□□□ -1.29
Upf3b-201ENSMUST00000076265 9930021J03RikH3BKP8 2027 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ighv11-1A0A075B5R6 117 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm42517A0A1Y7VLQ2 374 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm14443A2ARX0 610 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 SrsxB2RZI1 361 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Atf1P81269 269 aaKnown RBP6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 PcolceQ61398 468 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm9938Q8C3P5 112 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Adat1Q9JHI2 499 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tex101Q9JMI7 250 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 FryE9Q8I9 3020 aa6.96□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ighv5-9-1A0A0A6YVS4 126 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm765B2RVL9 189 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Pdlim3O70209 316 aaKnown RBP6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Nkx2-8O70584 235 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Them4Q3UUI3 230 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Taf9bQ6NZA9 249 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Vmn1r70Q8R254 298 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr969Q8VG89 311 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr477Q8VGI6 310 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 ClpsQ9CQC2 113 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmem126aQ9D8Y1 196 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tex48Q9DA81 110 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm45717A0A1B0GT68 152 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Nsun4C4P6S0 806 aaKnown RBP6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Reg1P43137 165 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmem136Q3TYE7 245 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmem56Q8CGF5 276 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Slc25a1Q8JZU2 311 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Slc25a42Q8R0Y8 318 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr495Q8VF12 330 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Timm50Q9D880 353 aa6.95□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Sod1P08228 154 aaKnown RBP6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 ParlQ5XJY4 377 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr1356Q7TQU8 320 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Psmf1Q8BHL8 271 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Rnf182Q8C432 247 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Nfam1Q8R4V1 264 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 LitafQ9JLJ0 161 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ap4s1Q9WVL1 144 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 MpdzQ8VBX6 2055 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Igkv12-98A0A0G2JGF9 115 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm45521A0A1B0GRK0 198 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr1274-psA0A1L1SQ02 309 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Rhox7aA2A4F1 281 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 P03976 113 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 FusP56959 518 aaKnown RBP6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tpt1P63028 172 aaKnown RBP6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmem253Q3UNB8 204 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 CebpzosQ8BTE5 80 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Rnf185Q91YT2 192 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm26620Q9CY65 116 aa6.94□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Igkv6-20A0A140T8P2 115 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Igkv12-46A0A140T8P6 115 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 BC024063A0A1W2P7G7 749 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Umad1E0CX23 159 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Spi1P17433 272 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 SelenoiQ80TA1 398 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Nudt14Q9D142 222 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Aaed1Q9D1A0 226 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmprss5Q9ER04 455 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 PtgesQ9JM51 153 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 AicdaQ9WVE0 198 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Dchs2A0A0A6YW72 3346 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm17655A0A1B0GT13 591 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Mtnd6P03925 172 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Cav3P51637 151 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr904Q7TRC9 310 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 4930535I16RikQ9CUI2 172 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tnfrsf13cQ9D8D0 175 aa6.93□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Sptbn4E9PX29 2561 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm8797A0A0A6YW67 77 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Rdh5O55240 318 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Dynlt1P51807 113 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms