RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Rbm3O89086 153 aaKnown RBP13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Lyzl1Q9CPX3 148 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 DnlzQ9D113 177 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Vgll4Q80V24 287 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Hist3h2bbQ8CGP0 126 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Hist3h2baQ9D2U9 126 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Mrpl51Q9CPY1 128 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Prima1Q810F0 153 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Cd200r1Q9ES57 326 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Col22a1E9Q7P1 1613 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Trbv12-1A0A0B4J1H0 124 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv4-50A0A0B4J1J0 117 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Spata25Q9DA57 226 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ly6g6fB2RXM6 300 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gm20403G3UYB0 123 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Xaf1Q5NBU8 273 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tcrg-C3L7N479 172 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 P03985 172 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Phxr1P15973 60 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Dkk1O54908 272 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Scrt1Q99M85 348 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ighv5-4A0A075B5P9 117 aa13.18□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Col11a2Q64739 1736 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Dynlt3P56387 116 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Chchd2Q9D1L0 153 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv4-74A0A0B4J1I3 119 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Cd5P13379 494 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ndufa7Q9Z1P6 113 aaKnown RBP13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 MpzP27573 248 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Dennd4cA6H8H2 1906 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv8-24A0A140T8P5 121 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 P01629 112 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ighv1-58A0A075B5W9 117 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv1-99F6XWB2 120 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ormdl2Q9CQZ0 153 aa13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ssbp1Q9CYR0 152 aaKnown RBP13.17□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gm21616B6ZB74 166 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 CfdP03953 259 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Cd8bP10300 213 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Pax8Q00288 457 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Prr15Q9D1T5 122 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gm42957D6RFQ2 366 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Klf14Q19A41 325 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Adamtsl3G3UXC7 1706 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv4-54A0A0G2JES9 117 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 SbpP15501 199 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gm16503Q8C6M9 103 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Rp1l1Q8CGM2 1859 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gm14548E9Q1Z6 680 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 5730522E02RikQ5SP45 163 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igsf23B2RTN2 239 aa13.16□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv4-61A0A0G2JH00 117 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tnfsf11O35235 316 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Adrb3P25962 400 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Defb3Q9WTL0 63 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Pilrb2Q2YFS1 225 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gm10842Q3U587 122 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tmprss12Q3V0Q7 336 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Mrpl27Q99N92 148 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ramp3Q9WUP1 147 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 StrcQ8VIM6 1809 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv4-59A0A0B4J1I8 117 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 P01822 137 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 GchfrP99025 84 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Cox7a2lQ61387 111 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Spink6Q8BT20 105 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Cldn23Q9D7D7 296 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Zswim8Q3UHH1 1832 aaKnown RBP13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ighv1-15A0A0A6YXA5 117 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Smad7O35253 426 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 PolP10400 120 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tmem86bQ497J1 226 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Crybb3Q9JJU9 211 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Zpld1Q8BGZ8 415 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Clec5aQ9R007 190 aa13.15□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Trav6n-5A0A075B621 112 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Trav6-5A0A075B6B5 112 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Ms4a12A0A087WSB9 263 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Gm6871L7N248 545 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Timp3P39876 211 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 MdfiP70331 251 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Tmem196V9GX04 182 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 6430628N08RikA0A0U1RQ45 177 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Igkv6-20A0A140T8P2 115 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Znf740Q6NZQ6 180 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 4930596D02RikQ3V0H9 216 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 St6galnac3Q9WUV2 305 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Igkv4-63A0A0G2JFU6 117 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 9830107B12RikD3Z5D6 160 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Lrp10Q7TQH7 713 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 C1qtnf4Q8R066 326 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Phf7Q9DAG9 307 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Atg2aQ6P4T0 1914 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 P01783 136 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 AgaQ64191 346 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Plac1Q9JI83 173 aa13.14□□□□□ -0.31
Ubr3-201ENSMUST00000055758 E130218I03RikA0A0U1RNU5 63 aa13.13□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Q8BG31 207 aa13.13□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Gm13090A2A899 111 aa13.13□□□□□ -0.31
Ubr3-201ENSMUST00000055758 Atp5g2P56383 146 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms